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ARRmNormalization

This is the released version of ARRmNormalization; for the devel version, see ARRmNormalization.

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3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

Adaptive Robust Regression normalization for Illumina methylation data

DOI: 10.18129/B9.bioc.ARRmNormalization

Bioconductor version: Release (3.23)

Perform the Adaptive Robust Regression method (ARRm) for the normalization of methylation data from the Illumina Infinium HumanMethylation 450k assay.

Author: Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe.

Maintainer: Jean-Philippe Fortin <jfortin at jhsph.edu>

Citation (from within R, enter citation("ARRmNormalization")):

Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe. ARRmNormalization: Adaptive Robust Regression normalization for Illumina methylation data. doi:10.18129/B9.bioc.ARRmNormalization, R package version 1.52.0, https://bioconductor.org/packages/ARRmNormalization.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ARRmNormalization")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ARRmNormalization")

Details

Package Archives

Follow Installation instructions to use this package in your R session.