To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ABSSeq")

In most cases, you don't need to download the package archive at all.

ABSSeq

ABSSeq: a new RNA-Seq analysis method based on absolute expression differences and generalized Poisson model

Bioconductor version: Release (3.0)

Inferring differential expression genes by absolute expression differences between two groups, utilizing generalized Poisson model to account for over-dispersion across samples and heterogeneity of differential expression across genes.

Author: Wentao Yang

Maintainer: Wentao Yang <wyang at zoologie.uni-kiel.de>

Citation (from within R, enter citation("ABSSeq")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ABSSeq")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ABSSeq")

 

PDF R Script ABSSeq
PDF   Reference Manual
Text   NEWS

Details

biocViews DifferentialExpression, Software
Version 1.2.0
In Bioconductor since BioC 2.14 (R-3.1)
License GPL (>= 3)
Depends R (>= 2.10), methods
Imports Rcpp
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ABSSeq_1.2.0.tar.gz
Windows Binary ABSSeq_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) ABSSeq_1.2.0.tgz
Mac OS X 10.9 (Mavericks) ABSSeq_1.2.0.tgz
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