lumiBarnes
Barnes Benchmark Illumina Tissues Titration Data
Bioconductor version: Release (3.20)
The Barnes benchmark dataset can be used to evaluate the algorithms for Illumina microarrays. It measured a titration series of two human tissues, blood and placenta, and includes six samples with the titration ratio of blood and placenta as 100:0, 95:5, 75:25, 50:50, 25:75 and 0:100. The samples were hybridized on HumanRef-8 BeadChip (Illumina, Inc) in duplicate. The data is loaded as an LumiBatch Object (see documents in the lumi package).
Author: Pan Du
Maintainer: Pan Du <dupan at northwestern.edu>
citation("lumiBarnes")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("lumiBarnes")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | ChipOnChipData, ExperimentData, MicroarrayData, Tissue |
Version | 1.46.0 |
License | LGPL |
Depends | R (>= 2.0), Biobase(>= 2.5.5), lumi(>= 1.1.0) |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | arrayMvout, lumi |
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Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | lumiBarnes_1.46.0.tar.gz |
Windows Binary (x86_64) | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/lumiBarnes |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/lumiBarnes |
Package Short Url | https://bioconductor.org/packages/lumiBarnes/ |
Package Downloads Report | Download Stats |