scanMiRData

DOI: 10.18129/B9.bioc.scanMiRData    

This is the development version of scanMiRData; to use it, please install the devel version of Bioconductor.

miRNA Affinity models for the scanMiR package

Bioconductor version: Development (3.14)

This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.

Author: Pierre-Luc Germain [aut] , Michael Soutschek [aut], Fridolin Gross [cre, aut]

Maintainer: Fridolin Gross <fridolin.gross at hest.ethz.ch>

Citation (from within R, enter citation("scanMiRData")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("scanMiRData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scanMiRData")

 

HTML R Script scanMiRData
PDF   Reference Manual

Details

biocViews ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data, miRNAData
Version 0.99.6
License GPL-3
Depends R (>= 4.0)
Imports scanMiR, utils
LinkingTo
Suggests knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me scanMiRApp
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package scanMiRData_0.99.6.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/scanMiRData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/scanMiRData
Package Short Url https://bioconductor.org/packages/scanMiRData/
Package Downloads Report Download Stats

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