Registration and Call for Abstracts Open for Bioc2024

mcsurvdata

This is the development version of mcsurvdata; for the stable release version, see mcsurvdata.

Meta cohort survival data


Bioconductor version: Development (3.19)

This package stores two merged expressionSet objects that contain the gene expression profile and clinical information of -a- six breast cancer cohorts and -b- four colorectal cancer cohorts. Breast cancer data are employed in the vignette of the hrunbiased package for survival analysis of gene signatures.

Author: Adria Caballe Mestres [aut, cre], Antoni Berenguer Llergo [aut], Camille Stephan-Otto Attolini [aut]

Maintainer: Adria Caballe Mestres <adria.caballe at irbbarcelona.org>

Citation (from within R, enter citation("mcsurvdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("mcsurvdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mcsurvdata")
analysis vignette HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData
Version 1.21.0
License GPL (>=2)
Depends R (>= 3.5), ExperimentHub
Imports AnnotationHub, Biobase
System Requirements
URL https://github.com/adricaba/mcsurvdata
See More
Suggests BiocStyle, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mcsurvdata_1.21.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/mcsurvdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mcsurvdata
Package Short Url https://bioconductor.org/packages/mcsurvdata/
Package Downloads Report Download Stats