To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

In most cases, you don't need to download the package archive at all.

SomaticCancerAlterations

 

   

This is the development version of SomaticCancerAlterations; for the stable release version, see SomaticCancerAlterations.

Somatic Cancer Alterations

Bioconductor version: Development (3.5)

Collection of somatic cancer alteration datasets

Author: Julian Gehring (EMBL Heidelberg)

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("SomaticCancerAlterations")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

Documentation

HTML R Script SomaticCancerAlterations - HTML
PDF   Reference Manual

Details

biocViews CancerData, ExperimentData, Genome, NCI, Project1000genomes
Version 1.11.0
License GPL-3
Depends R (>= 3.0.0)
Imports GenomicRanges, exomeCopy, stringr, IRanges, S4Vectors
LinkingTo
Suggests testthat, ggbio, ggplot2, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me SomaticSignatures
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source SomaticCancerAlterations_1.11.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/SomaticCancerAlterations/
Package Downloads Report Download Stats

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