MMDiffBamSubset

Example ChIP-Seq data for the MMDiff package

Bioconductor version: Development (3.0)

Subset of BAM files, including WT_2.bam, Null_2.bam, Resc_2.bam, Input.bam from the "Cfp1" experiment (see Clouaire et al., Genes Dev. 2012). Data is available under ArrayExpress accession numbers E-ERAD-79. Additionally, corresponding subset of peaks called by MACS

Author: Gabriele Schweikert

Maintainer: Gabriele Schweikert <G.Schweikert at ed.ac.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("MMDiffBamSubset")

To cite this package in a publication, start R and enter:

    citation("MMDiffBamSubset")

Documentation

PDF   Reference Manual

Details

biocViews ChIPseqData, ExperimentData
Version 1.1.0
License LGPL
Depends
Imports
Suggests MMDiff
System Requirements
URL
Depends On Me
Imports Me
Suggests Me MMDiff

Package Downloads

Package Source MMDiffBamSubset_1.1.0.tar.gz
Windows Binary MMDiffBamSubset_1.1.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) MMDiffBamSubset_1.1.0.tgz
Mac OS X 10.9 (Mavericks) MMDiffBamSubset_1.1.0.tgz
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