JASPAR2014

DOI: 10.18129/B9.bioc.JASPAR2014    

This is the development version of JASPAR2014; to use it, please install the devel version of Bioconductor.

Data package for JASPAR

Bioconductor version: Development (3.10)

Data package for JASPAR 2014. To search this databases, please use the package TFBSTools.

Author: Ge Tan <ge.tan09 at imperial.ac.uk>

Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("JASPAR2014")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, SequencingData
Version	1.21.0
License	GPL-2
Depends	R (>= 3.0.1), methods, Biostrings(>= 2.29.19)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL	http://jaspar.genereg.net/
Depends On Me
Imports Me
Suggests Me	MatrixRider, TFBSTools
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	JASPAR2014_1.21.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/JASPAR2014
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/JASPAR2014
Package Short Url	http://bioconductor.org/packages/JASPAR2014/
Package Downloads Report	Download Stats