To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("seqcombo")

In most cases, you don't need to download the package archive at all.

seqcombo

DOI: 10.18129/B9.bioc.seqcombo    

This is the development version of seqcombo; to use it, please install the devel version of Bioconductor.

Visualization Tool for Sequence Recombination and Reassortment

Bioconductor version: Development (3.6)

Provides useful functions for visualizing sequence recombination and virus reassortment events.

Author: Guangchuang Yu [aut, cre]

Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>

Citation (from within R, enter citation("seqcombo")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("seqcombo")

Documentation

HTML R Script Reassortment
HTML R Script seqcombo introduction
PDF   Reference Manual
Text   NEWS

Details

biocViews Alignment, Software, Visualization
Version 0.99.12
License Artistic-2.0
Depends R (>= 3.4.0)
Imports Biostrings, cowplot, dplyr, ggplot2, grid, igraph, magrittr, methods, rvcheck, utils
LinkingTo
Suggests emojifont, knitr, prettydoc, tibble
SystemRequirements
Enhances
URL
BugReports https://github.com/GuangchuangYu/seqcombo/issues
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package seqcombo_0.99.12.tar.gz
Windows Binary seqcombo_0.99.12.zip
Mac OS X 10.11 (El Capitan) seqcombo_0.99.12.tgz
Source Repository git clone https://git.bioconductor.org/packages/seqcombo
Package Short Url http://bioconductor.org/packages/seqcombo/
Package Downloads Report Download Stats

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