To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pepStat")

In most cases, you don't need to download the package archive at all.

pepStat

DOI: 10.18129/B9.bioc.pepStat    

This is the development version of pepStat; for the stable release version, see pepStat.

Statistical analysis of peptide microarrays

Bioconductor version: Development (3.6)

Statistical analysis of peptide microarrays

Author: Raphael Gottardo, Gregory C Imholte, Renan Sauteraud, Mike Jiang

Maintainer: Gregory C Imholte <gimholte at uw.edu>

Citation (from within R, enter citation("pepStat")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pepStat")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pepStat")

 

PDF R Script Full peptide microarray analysis
PDF   Reference Manual

Details

biocViews Microarray, Preprocessing, Software
Version 1.11.0
In Bioconductor since BioC 3.0 (R-3.1) (3 years)
License Artistic-2.0
Depends R (>= 3.0.0), Biobase, IRanges
Imports limma, fields, GenomicRanges, ggplot2, plyr, tools, methods, data.table
LinkingTo
Suggests pepDat, Pviz, knitr, shiny
SystemRequirements
Enhances
URL https://github.com/RGLab/pepStat
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package pepStat_1.11.0.tar.gz
Windows Binary pepStat_1.11.0.zip
Mac OS X 10.11 (El Capitan) pepStat_1.11.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/pepStat
Package Short Url http://bioconductor.org/packages/pepStat/
Package Downloads Report Download Stats

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