To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nondetects")

In most cases, you don't need to download the package archive at all.

nondetects

DOI: 10.18129/B9.bioc.nondetects    

This is the development version of nondetects; for the stable release version, see nondetects.

Non-detects in qPCR data

Bioconductor version: Development (3.7)

Methods to model and impute non-detects in the results of qPCR experiments.

Author: Matthew N. McCall <mccallm at gmail.com>, Valeriia Sherina <valery.sherina at gmail.com>

Maintainer: Valeriia Sherina <valery.sherina at gmail.com>

Citation (from within R, enter citation("nondetects")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nondetects")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AssayDomain, GeneExpression, Preprocessing, Software, Technology, WorkflowStep, qPCR
Version 2.9.1
In Bioconductor since BioC 2.14 (R-3.1) (3.5 years)
License GPL-3
Depends R (>= 3.2), Biobase(>= 2.22.0)
Imports limma, mvtnorm, utils, methods, arm, HTqPCR(>= 1.16.0)
LinkingTo
Suggests knitr, rmarkdown, BiocStyle(>= 1.0.0), RUnit, BiocGenerics(>= 0.8.0)
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package nondetects_2.9.1.tar.gz
Windows Binary nondetects_2.9.0.zip
Mac OS X 10.11 (El Capitan) nondetects_2.9.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/nondetects
Package Short Url http://bioconductor.org/packages/nondetects/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: