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This is the development version of makecdfenv; for the stable release version, see makecdfenv.

CDF Environment Maker

Bioconductor version: Development (3.0)

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Author: Rafael A. Irizarry <rafa at>, Laurent Gautier <laurent at>, Wolfgang Huber <w.huber at>, Ben Bolstad <bmb at>

Maintainer: James W. MacDonald <jmacdon at>

To install this package, start R and enter:

Citation (from within R, enter citation("makecdfenv")):




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PDF R Script makecdfenv primer
PDF   Reference Manual


biocViews DataImport, OneChannel, Preprocessing, Software
Version 1.41.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License GPL (>= 2)
Depends R (>= 2.6.0), affyio
Imports Biobase, affy, methods, stats, utils, zlibbioc
System Requirements
Depends On Me altcdfenvs
Imports Me
Suggests Me

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Package Source makecdfenv_1.41.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) makecdfenv_1.41.0.tgz
Mac OS X 10.9 (Mavericks) makecdfenv_1.41.0.tgz
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