To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("limmaGUI")

In most cases, you don't need to download the package archive at all.

limmaGUI

 

   

This is the development version of limmaGUI; for the stable release version, see limmaGUI.

GUI for limma package with two color microarrays

Bioconductor version: Development (3.4)

A Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.

Author: James Wettenhall [aut], Gordon Smyth [aut], Keith Satterley [ctb], Yifang Hu [ctb]

Maintainer: Yifang Hu <hu at wehi.edu.au>, Gordon Smyth <smyth at wehi.edu.au>, Keith Satterley <keith at wehi.edu.au>

Citation (from within R, enter citation("limmaGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("limmaGUI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("limmaGUI")

 

PDF R Script
PDF
PDF LinModIntro.pdf
HTML About limmaGUI
HTML Customizing the menus in limmaGUI (for Advanced users)
HTML Importing MA Data into LimmaGUI
HTML InputFiles.html
HTML LimmaGUI Developers' Guide
HTML limmaGUI Documentation
HTML Troubleshooting Window Focus Problems
PDF   Reference Manual

Details

biocViews BatchEffect, Bayesian, DataImport, DifferentialExpression, GUI, GeneExpression, Microarray, MultipleComparison, Normalization, Preprocessing, QualityControl, Regression, Software, TimeCourse, TwoChannel, mRNAMicroarray
Version 1.49.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License GPL (>=2)
Depends
Imports limma, tcltk, BiocInstaller, tkrplot, R2HTML, xtable, gcrma, AnnotationDbi
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://bioinf.wehi.edu.au/limmaGUI/
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source limmaGUI_1.49.0.tar.gz
Windows Binary limmaGUI_1.49.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/limmaGUI
Package Short Url http://bioconductor.org/packages/limmaGUI/
Package Downloads Report Download Stats

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