DOI: 10.18129/B9.bioc.idpr    

This is the development version of idpr; for the stable release version, see idpr.

Profiling and Analyzing Intrinsically Disordered Proteins in R

Bioconductor version: Development (3.15)

‘idpr’ aims to integrate tools for the computational analysis of intrinsically disordered proteins (IDPs) within R. This package is used to identify known characteristics of IDPs for a sequence of interest with easily reported and dynamic results. Additionally, this package includes tools for IDP-based sequence analysis to be used in conjunction with other R packages.

Author: William M. McFadden [cre, aut], Judith L. Yanowitz [aut, fnd], Michael Buszczak [ctb, fnd]

Maintainer: William M. McFadden <wmm27 at>

Citation (from within R, enter citation("idpr")):


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if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


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HTML R Script Charge and Hydropathy Vignette
HTML R Script Disordered Matrices Vignette
HTML R Script idpr Package Overview Vignette
HTML R Script IUPred Vignette
HTML R Script Sequence Map Vignette
HTML R Script Structural Tendency Vignette
PDF   Reference Manual


biocViews CellBiology, Proteomics, Software, StructuralPrediction
Version 1.5.0
In Bioconductor since BioC 3.12 (R-4.0) (1 year)
License LGPL-3
Depends R (>= 4.0.0)
Imports ggplot2 (>= 3.3.0), magrittr (>= 1.5), dplyr (>= 0.8.5), plyr (>= 1.8.6), jsonlite (>= 1.6.1), rlang (>= 0.4.6), Biostrings(>= 2.56.0), methods (>= 4.0.0)
Suggests knitr, rmarkdown, msa, ape, testthat, seqinr
Depends On Me
Imports Me
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