flowClust

Clustering for Flow Cytometry

Bioconductor version: Development (3.0)

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <gfinak at fhcrc.org>

Maintainer: Greg Finak <gfinak at fhcrc.org>, Mike Jiang <wjiang2 at fhcrc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("flowClust")

To cite this package in a publication, start R and enter:

    citation("flowClust")

Documentation

PDF R Script flowClust package
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews Clustering, FlowCytometry, Software, Visualization
Version 3.5.0
In Bioconductor since BioC 2.2 (R-2.7)
License Artistic-2.0
Depends R (>= 2.5.0), methods, Biobase, graph, RBGL, ellipse, flowViz, mnormt, corpcor, flowCore, clue
Imports BiocGenerics, MCMCpack
Suggests parallel
System Requirements
URL
Depends On Me flowMerge, flowTrans
Imports Me flowPhyto, flowTrans, flowType, openCyto
Suggests Me BiocGenerics

Package Downloads

Package Source flowClust_3.5.0.tar.gz
Windows Binary flowClust_3.5.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) flowClust_3.5.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

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