clusterStab

DOI: 10.18129/B9.bioc.clusterStab    

This is the development version of clusterStab; for the stable release version, see clusterStab.

Compute cluster stability scores for microarray data

Bioconductor version: Development (3.8)

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Author: James W. MacDonald, Debashis Ghosh, Mark Smolkin

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Citation (from within R, enter citation("clusterStab")):

Installation

To install this package, start R and enter:

if (!require("BiocManager"))
    install.packages("BiocManager")
BiocManager::install("clusterStab", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("clusterStab")

 

PDF R Script clusterStab Overview
PDF   Reference Manual

Details

biocViews Clustering, Software
Version 1.53.0
In Bioconductor since BioC 1.7 (R-2.2) (13 years)
License Artistic-2.0
Depends Biobase(>= 1.4.22), R (>= 1.9.0), methods
Imports
LinkingTo
Suggests fibroEset, genefilter
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package clusterStab_1.53.0.tar.gz
Windows Binary clusterStab_1.53.0.zip
Mac OS X 10.11 (El Capitan) clusterStab_1.53.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/clusterStab
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/clusterStab
Package Short Url http://bioconductor.org/packages/clusterStab/
Package Downloads Report Download Stats

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