affyio

Tools for parsing Affymetrix data files

Bioconductor version: Development (3.0)

Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.

Author: Benjamin Milo Bolstad <bmb at bmbolstad.com>

Maintainer: Benjamin Milo Bolstad <bmb at bmbolstad.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("affyio")

To cite this package in a publication, start R and enter:

    citation("affyio")

Documentation

PDF   Reference Manual
Text   LICENSE

Details

biocViews DataImport, Infrastructure, Microarray, Software
Version 1.33.0
In Bioconductor since BioC 1.8 (R-2.3)
License LGPL (>= 2)
Depends R (>= 2.6.0)
Imports zlibbioc
Suggests
System Requirements
URL
Depends On Me affylmGUI, affyPara, makecdfenv, SCAN.UPC, sscore
Imports Me affy, crlmm, ExiMiR, gcrma, oligo, oligoClasses, puma
Suggests Me BufferedMatrixMethods

Package Downloads

Package Source affyio_1.33.0.tar.gz
Windows Binary affyio_1.33.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) affyio_1.33.0.tgz
Mac OS X 10.9 (Mavericks)
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