DOI: 10.18129/B9.bioc.PANR    

This is the development version of PANR; for the stable release version, see PANR.

Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations

Bioconductor version: Development (3.8)

This package provides S4 classes and methods for inferring functional gene networks with edges encoding posterior beliefs of gene association types and nodes encoding perturbation effects.

Author: Xin Wang <xin_wang at>

Maintainer: Xin Wang <xin_wang at>

Citation (from within R, enter citation("PANR")):


To install this package, start R and enter:

if (!require("BiocManager"))
BiocManager::install("PANR", version = "devel")


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PDF R Script Main vignette:Posterior association network and enriched functional gene modules inferred from rich phenotypes of gene perturbations
PDF   Reference Manual
Text   NEWS


biocViews CellBasedAssays, Clustering, GraphAndNetwork, NetworkInference, Software, Visualization
Version 1.27.0
In Bioconductor since BioC 2.9 (R-2.14) (6.5 years)
License Artistic-2.0
Depends R (>= 2.14), igraph
Imports graphics, grDevices, MASS, methods, pvclust, stats, utils, RedeR
Suggests snow
Depends On Me
Imports Me Mulder2012
Suggests Me
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