HELP

Tools for HELP data analysis

Bioconductor version: Development (3.0)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications

Author: Reid F. Thompson <rthompso at aecom.yu.edu>, John M. Greally <jgreally at aecom.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <rthompso at aecom.yu.edu>

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("HELP")

Citation (from within R, enter citation("HELP")):

Documentation

PDF R Script 1. Primer
PDF   Reference Manual

Details

biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.23.0
In Bioconductor since BioC 2.3 (R-2.8)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source HELP_1.23.0.tar.gz
Windows Binary HELP_1.23.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) HELP_1.23.0.tgz
Mac OS X 10.9 (Mavericks) HELP_1.23.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center