DOI: 10.18129/B9.bioc.GSRI    

This is the development version of GSRI; for the stable release version, see GSRI.

Gene Set Regulation Index

Bioconductor version: Development (3.7)

The GSRI package estimates the number of differentially expressed genes in gene sets, utilizing the concept of the Gene Set Regulation Index (GSRI).

Author: Julian Gehring, Kilian Bartholome, Clemens Kreutz, Jens Timmer

Maintainer: Julian Gehring <jg-bioc at>

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PDF R Script Introduction to the GSRI package: Estimating Regulatory Effects utilizing the Gene Set Regulation Index
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, GeneRegulation, GeneSetEnrichment, Microarray, Software, Transcription
Version 2.27.0
In Bioconductor since BioC 2.6 (R-2.11) (8 years)
License GPL-3
Depends R (>= 2.14.2), fdrtool
Imports methods, graphics, stats, utils, genefilter, Biobase, GSEABase, les(>= 1.1.6)
Suggests limma, hgu95av2.db
Enhances parallel
Depends On Me
Imports Me
Suggests Me
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