GRmetrics

DOI: 10.18129/B9.bioc.GRmetrics    

This is the development version of GRmetrics; for the stable release version, see GRmetrics.

Calculate growth-rate inhibition (GR) metrics

Bioconductor version: Development (3.15)

Functions for calculating and visualizing growth-rate inhibition (GR) metrics.

Author: Nicholas Clark

Maintainer: Nicholas Clark <nicholas.clark00 at gmail.com>, Mario Medvedovic <medvedm at ucmail.uc.edu>

Citation (from within R, enter citation("GRmetrics")):

Installation

To install this package, start R (version "4.2") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GRmetrics")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews CellBasedAssays, CellBiology, ImmunoOncology, Software, TimeCourse, Visualization
Version 1.21.0
In Bioconductor since BioC 3.4 (R-3.3) (5 years)
License GPL-3
Depends R (>= 4.0), SummarizedExperiment
Imports drc, plotly, ggplot2, S4Vectors, stats
LinkingTo
Suggests knitr, rmarkdown, BiocStyle, tinytex
SystemRequirements
Enhances
URL https://github.com/uc-bd2k/GRmetrics
BugReports https://github.com/uc-bd2k/GRmetrics/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/GRmetrics
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GRmetrics
Package Short Url https://bioconductor.org/packages/GRmetrics/
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