DOI: 10.18129/B9.bioc.ChIPsim    

This is the development version of ChIPsim; for the stable release version, see ChIPsim.

Simulation of ChIP-seq experiments

Bioconductor version: Development (3.9)

A general framework for the simulation of ChIP-seq data. Although currently focused on nucleosome positioning the package is designed to support different types of experiments.

Author: Peter Humburg

Maintainer: Peter Humburg <Peter.Humburg at>

Citation (from within R, enter citation("ChIPsim")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("ChIPsim", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Simulating ChIP-seq experiments
PDF   Reference Manual


biocViews ChIPSeq, Infrastructure, Software
Version 1.37.0
In Bioconductor since BioC 2.5 (R-2.10) (9.5 years)
License GPL (>= 2)
Depends Biostrings(>= 2.29.2)
Imports IRanges, XVector, Biostrings, ShortRead, graphics, methods, stats, utils
Suggests actuar, zoo
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChIPsim_1.37.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.11 (El Capitan) ChIPsim_1.37.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
Package Downloads Report Download Stats

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