To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ARRmNormalization")

In most cases, you don't need to download the package archive at all.

ARRmNormalization

 

   

This is the development version of ARRmNormalization; for the stable release version, see ARRmNormalization.

Adaptive Robust Regression normalization for Illumina methylation data

Bioconductor version: Development (3.4)

Perform the Adaptive Robust Regression method (ARRm) for the normalization of methylation data from the Illumina Infinium HumanMethylation 450k assay.

Author: Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe.

Maintainer: Jean-Philippe Fortin <jfortin at jhsph.edu>

Citation (from within R, enter citation("ARRmNormalization")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ARRmNormalization")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ARRmNormalization")

 

PDF R Script ARRmNormalization
PDF   Reference Manual

Details

biocViews DNAMethylation, Microarray, Preprocessing, Software, TwoChannel
Version 1.13.0
In Bioconductor since BioC 2.12 (R-3.0) (3 years)
License Artistic-2.0
Depends R (>= 2.15.1), ARRmData
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ARRmNormalization_1.13.0.tar.gz
Windows Binary ARRmNormalization_1.13.0.zip
Mac OS X 10.9 (Mavericks) ARRmNormalization_1.13.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/ARRmNormalization
Package Short Url http://bioconductor.org/packages/ARRmNormalization/
Package Downloads Report Download Stats

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