RImmPort

This is the released version of RImmPort; for the devel version, see RImmPort.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3

RImmPort: Enabling Ready-for-analysis Immunology Research Data

Bioconductor version: Release (3.23)

The RImmPort package simplifies access to ImmPort data for analysis in the R environment. It provides a standards-based interface to the ImmPort study data that is in a proprietary format.

Author: Ravi Shankar <rshankar at stanford.edu>

Maintainer: Zicheng Hu <Zicheng.Hu at ucsf.edu>, Ravi Shankar <rshankar at stanford.edu>

Citation (from within R, enter citation("RImmPort")):

Ravi Shankar. RImmPort: RImmPort: Enabling Ready-for-analysis Immunology Research Data. doi:10.18129/B9.bioc.RImmPort, R package version 1.40.0, https://bioconductor.org/packages/RImmPort.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RImmPort")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RImmPort")

RImmPort: Enabling ready-for-analysis immunology research data	PDF	R Script
RImmPort: Quick Start Guide	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	BiomedicalInformatics, DataImport, DataRepresentation, Software
Version	1.40.0
In Bioconductor since	BioC 3.3 (R-3.3) (10.5 years)
License	GPL-3
Depends
Imports	plyr, dplyr, DBI, data.table, reshape2, methods, sqldf, tools, utils, RSQLite
System Requirements
URL	http://bioconductor.org/packages/RImmPort/

Suggests	knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RImmPort_1.40.0.tar.gz
Windows Binary (x86_64)	RImmPort_1.40.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	RImmPort_1.40.0.tgz
macOS Binary (sonoma-arm64)	RImmPort_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RImmPort
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RImmPort
Package Short Url	https://bioconductor.org/packages/RImmPort/
Package Downloads Report	Download Stats