affyio
Tools for parsing Affymetrix data files
Bioconductor version: 3.23 · Package version: 1.82.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("affyio")Details
| Maintainer | Ben Bolstad <bmb@bmbolstad.com> |
| Author | Ben Bolstad <bmb@bmbolstad.com> |
| License | LGPL (>= 2) |
| URL | https://github.com/bmbolstad/affyio |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, Infrastructure, Microarray, Software |
| Package Short Url | https://bioconductor.org/packages/affyio/ |
Citation
From within R, enter citation("affyio"):
Ben Bolstad. affyio: Tools for parsing Affymetrix data files. doi:10.18129/B9.bioc.affyio, R package version 1.82.0, https://bioconductor.org/packages/affyio.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | affyio_1.82.0.tar.gz |
| Windows binary (x86_64) | affyio_1.82.0.zip |
| macOS binary (arm64) | affyio_1.82.0.tgz |
| macOS binary (x86_64) | affyio_1.82.0.tgz |
Dependencies
Depends: R (>= 2.6.0)
Imports: methods
Reverse dependencies
Depends On Me (2): makecdfenv, SCAN.UPC
Imports Me (8): affy, affylmGUI, crlmm, ExiMiR, gcrma, oligo, oligoClasses, puma
Suggests Me (1): BufferedMatrixMethods