bash
docker run -it ghcr.io/js2264/biocbookdemo:devel RWrite Quarto books with Bioconductor
Package: BiocBookDemo
Authors: Jacques Serizay [aut, cre]
Compiled: 2023-10-25
Package version: 1.0.0
R version: R version 4.3.1 (2023-06-16)
BioC version: 3.18
License: MIT + file LICENSE
What are BiocBooks?
BiocBooks are package-based, versioned online books with a supporting Docker image for each book version.
A BiocBook can be created by authors (e.g. R developers, but also scientists, teachers, communicators, β¦) who wish to:
- Write: compile a body of biological and/or bioinformatics knowledge;
- Containerize: provide Docker images to reproduce the examples illustrated in the compendium;
- Publish: deploy an online book to disseminate the compendium;
- Version: automatically generate specific online book versions and Docker images for specific Bioconductor releases.
Tip
A {BiocBook}-based package hosted on GitHub with a branch named RELEASE_X_Y provides:
- A Docker image: hosted on ghcr.io;
- An online book (a.k.a website): hosted on the GitHub repository
gh-pagesbranch;
Both are built against the specific Bioconductor release X.Y.
A {BiocBook}-based package submitted to Bioconductor also lead to the online book being independently built by the Bioconductor Build System (BBS) and deployed to https://bioconductor.org/books/<bioc_version>/<pkg>/
What is this {BiocBook} package?
The {BiocBook} package offers a streamlined approach to creating BiocBooks, with several important benefits:
- The author creates a {
BiocBook}-based package without leaving R; - The author writes book chapters in
pages/*.qmdfiles using enhanced markdown; - The author can submit its {
BiocBook}-based package to Bioconductor.
The containerization and publishing of the new {BiocBook}-based package is automated:
- A Github Action workflow generates different Docker images for different Bioconductor releases, with the packages used in the book pre-installed;
- A Github Action workflow publishes different book versions for different Bioconductor releases.
Main features of BiocBooks
Fully compatible with the Bioconductor Build System
When a {BiocBook}-based package is accepted into Bioconductor, it is automatically integrated into the Bionconductor Build System (BBS).
This means that it is getting built using R CMD build --keep-empty-dirs --no-resave-data .. This triggers the rendering of the book contained in /inst/. Book packages built by the BBS are then automatically deployed and are eventually available at https://bioconductor.org/books/<bioc_version>/<pkg>/.
Automated versioning of Docker images
A separate Docker image is built for each branch (named devel or RELEASE_X_Y) of a {BiocBook}-based Github repository.
Each Docker image provides pre-installed R packages:
- Bioconductor release
X.Y; - Specific book dependencies from Bioconductor release
X.Y(listed inDESCRIPTION); - The book package itself
The Docker images also include a micromamba-based environment, named BiocBook, in which all the softwares listed in requirements.yml are installed.
For example, Docker images built from the {BiocBookDemo} package repository are available here:
π ghcr.io/js2264/biocbookdemo π³
Get started now π
You can get access to all the packages used in this book in < 1 minute, using this command in a terminal:
Automated versioning of the online book
Regardless of whether the book package is submitted to Bioconductor, a Github Actions workflow publishes individual online books for each branch (named devel or RELEASE_X_Y) of a BiocBook-based Github repository.
For example, the online book version matching the devel version of the {BiocBook} package is available from:
RStudio Server
An RStudio Server instance based on a specific Bioconductor <version> (devel or RELEASE_X_Y) can be initiated from the corresponding Docker image as follows:
bash
docker run \
--volume <local_folder>:<destination_folder> \
-e PASSWORD=OHCA \
-p 8787:8787 \
ghcr.io/<github_user>/<biocbook_repo>:<version>The initiated RStudio Server instance will be available at https://localhost:8787.
Further instructions regarding Bioconductor-based Docker images are available here.
Acknowledgments
This works was inspired by and closely follows the strategy used in coordination by the Bioconductor core team and Aaron Lun to submit book-containing packages (from the OSCA series as well as SingleR and csaw books).
- Orchestrating Single-Cell Analysis with Bioconductor (n.d.)
- Assigning cell types with SingleR (2023)
- The csaw Book (2023)
This package was also inspired by the *down package series, including:
Session info
Click to expand π
sessioninfo::session_info(
installed.packages()[,"Package"],
include_base = TRUE
)
## β Session info ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
## setting value
## version R version 4.3.1 (2023-06-16)
## os Ubuntu 22.04.3 LTS
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate C
## ctype en_US.UTF-8
## tz America/New_York
## date 2023-10-25
## pandoc 2.7.3 @ /usr/bin/ (via rmarkdown)
##
## β Packages ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
## package * version date (UTC) lib source
## a4 1.50.0 2023-10-24 [2] Bioconductor
## a4Base 1.50.0 2023-10-24 [2] Bioconductor
## a4Classif 1.50.0 2023-10-24 [2] Bioconductor
## a4Core 1.50.0 2023-10-24 [2] Bioconductor
## a4Preproc 1.50.0 2023-10-24 [2] Bioconductor
## a4Reporting 1.50.0 2023-10-24 [2] Bioconductor
## ABarray 1.70.0 2023-10-24 [2] Bioconductor
## abind 1.4-5 2016-07-21 [2] CRAN (R 4.3.1)
## abseqR 1.20.0 2023-10-24 [2] Bioconductor
## ABSSeq 1.56.0 2023-10-24 [2] Bioconductor
## acde 1.32.0 2023-10-24 [2] Bioconductor
## ACE 1.20.0 2023-10-24 [2] Bioconductor
## aCGH 1.80.0 2023-10-24 [2] Bioconductor
## ACME 2.58.0 2023-10-24 [2] Bioconductor
## actuar 3.3-3 2023-10-24 [2] CRAN (R 4.3.1)
## ada 2.0-5 2016-05-13 [2] CRAN (R 4.3.1)
## adabag 5.0 2023-05-31 [2] CRAN (R 4.3.1)
## ADaCGH2 2.42.0 2023-10-24 [2] Bioconductor
## ADAM 1.18.0 2023-10-24 [2] Bioconductor
## ADAMgui 1.18.0 2023-10-24 [2] Bioconductor
## AdaptGauss 1.5.6 2020-02-03 [2] CRAN (R 4.3.1)
## additivityTests 1.1-4.1 2022-06-24 [2] CRAN (R 4.3.1)
## adductData 1.17.0 2023-10-24 [2] Bioconductor
## adductomicsR 1.18.0 2023-10-24 [2] Bioconductor
## ade4 1.7-22 2023-02-06 [2] CRAN (R 4.3.1)
## adegenet 2.1.10 2023-01-26 [2] CRAN (R 4.3.1)
## adegraphics 1.0-21 2023-10-13 [2] CRAN (R 4.3.1)
## adehabitatLT 0.3.27 2023-04-06 [2] CRAN (R 4.3.1)
## adehabitatMA 0.3.16 2023-04-06 [2] CRAN (R 4.3.1)
## adephylo 1.1-16 2023-10-06 [2] CRAN (R 4.3.1)
## adespatial 0.3-23 2023-10-18 [2] CRAN (R 4.3.1)
## ADGofTest 0.3 2011-12-28 [2] CRAN (R 4.3.1)
## ADImpute 1.12.0 2023-10-24 [2] Bioconductor
## admisc 0.33 2023-06-30 [2] CRAN (R 4.3.1)
## adSplit 1.72.0 2023-10-24 [2] Bioconductor
## adverSCarial 1.0.0 2023-10-24 [2] Bioconductor
## afex 1.3-0 2023-04-17 [2] CRAN (R 4.3.1)
## AffiXcan 1.20.0 2023-10-24 [2] Bioconductor
## affxparser 1.74.0 2023-10-24 [2] Bioconductor
## affy 1.80.0 2023-10-24 [2] Bioconductor
## affycomp 1.78.0 2023-10-24 [2] Bioconductor
## affycompData 1.39.2 2023-10-24 [2] Bioconductor
## affyContam 1.60.0 2023-10-24 [2] Bioconductor
## affycoretools 1.74.0 2023-10-24 [2] Bioconductor
## affydata 1.49.1 2023-10-24 [2] Bioconductor
## Affyhgu133A2Expr 1.37.0 2023-10-24 [2] Bioconductor
## Affyhgu133aExpr 1.39.0 2023-10-24 [2] Bioconductor
## Affyhgu133Plus2Expr 1.35.0 2023-10-24 [2] Bioconductor
## affyILM 1.54.0 2023-10-24 [2] Bioconductor
## affyio 1.72.0 2023-10-24 [2] Bioconductor
## affylmGUI 1.76.0 2023-10-24 [2] Bioconductor
## AffymetrixDataTestFiles 0.39.1 2023-10-24 [2] Bioconductor
## Affymoe4302Expr 1.39.0 2023-10-24 [2] Bioconductor
## affyPLM 1.78.0 2023-10-24 [2] Bioconductor
## AffyRNADegradation 1.48.0 2023-10-24 [2] Bioconductor
## AGDEX 1.50.0 2023-10-24 [2] Bioconductor
## aggregateBioVar 1.12.0 2023-10-24 [2] Bioconductor
## aggregation 1.0.1 2018-01-25 [2] CRAN (R 4.3.1)
## agilp 3.34.0 2023-10-24 [2] local
## AgiMicroRna 2.52.0 2023-10-24 [2] Bioconductor
## agricolae 1.3-7 2023-10-22 [2] CRAN (R 4.3.1)
## AHCytoBands 0.99.1 2023-10-25 [2] Bioconductor
## AHEnsDbs 1.1.10 2023-10-25 [2] Bioconductor
## AHLRBaseDbs 0.99.3 2023-10-25 [2] Bioconductor
## AHMassBank 1.2.0 2023-10-24 [2] Bioconductor
## AHMeSHDbs 0.99.6 2023-10-25 [2] Bioconductor
## AhoCorasickTrie 0.1.2 2020-09-29 [2] CRAN (R 4.3.1)
## AHPathbankDbs 0.99.5 2023-10-25 [2] Bioconductor
## AHPubMedDbs 0.99.8 2023-10-25 [2] Bioconductor
## AHWikipathwaysDbs 0.99.4 2023-10-25 [2] Bioconductor
## AICcmodavg 2.3-2 2023-03-20 [2] CRAN (R 4.3.1)
## AIMS 1.34.0 2023-10-24 [2] Bioconductor
## airpart 1.10.0 2023-10-24 [2] Bioconductor
## airway 1.21.0 2023-10-24 [2] Bioconductor
## akima 0.6-3.4 2022-04-27 [2] CRAN (R 4.3.1)
## akmbiclust 0.1.0 2020-09-24 [2] CRAN (R 4.3.1)
## alabama 2023.1.0 2023-08-22 [2] CRAN (R 4.3.1)
## alabaster 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.base 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.bumpy 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.files 1.0.0 2023-10-24 [2] Bioconductor
## alabaster.mae 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.matrix 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.ranges 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.sce 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.schemas 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.se 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.spatial 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.string 1.2.0 2023-10-24 [2] Bioconductor
## alabaster.vcf 1.2.0 2023-10-24 [2] Bioconductor
## ALDEx2 1.34.0 2023-10-24 [2] Bioconductor
## alevinQC 1.18.0 2023-10-24 [2] Bioconductor
## AlgDesign 1.2.1 2022-05-25 [2] CRAN (R 4.3.1)
## ALL 1.43.0 2023-10-24 [2] Bioconductor
## AllelicImbalance 1.40.0 2023-10-24 [2] Bioconductor
## ALLMLL 1.41.0 2023-10-24 [2] Bioconductor
## alluvial 0.1-2 2016-09-09 [2] CRAN (R 4.3.1)
## AlphaBeta 1.16.0 2023-10-24 [2] Bioconductor
## alphahull 2.5 2022-06-16 [2] CRAN (R 4.3.1)
## AlphaMissense.v2023.hg19 3.18.2 2023-10-25 [2] Bioconductor
## AlphaMissense.v2023.hg38 3.18.2 2023-10-25 [2] Bioconductor
## AlpsNMR 4.4.0 2023-10-24 [2] Bioconductor
## altcdfenvs 2.64.0 2023-10-24 [2] Bioconductor
## alternativeSplicingEvents.hg19 1.1.0 2023-10-25 [2] Bioconductor
## alternativeSplicingEvents.hg38 1.1.0 2023-10-25 [2] Bioconductor
## amap 0.8-19 2022-10-28 [2] CRAN (R 4.3.1)
## AMARETTO 1.18.0 2023-10-24 [2] Bioconductor
## AMOUNTAIN 1.28.0 2023-10-24 [2] Bioconductor
## AmpAffyExample 1.41.1 2023-10-24 [2] Bioconductor
## amplican 1.24.0 2023-10-24 [2] Bioconductor
## analogue 0.17-6 2021-06-20 [2] CRAN (R 4.3.1)
## Anaquin 2.26.0 2023-10-24 [2] Bioconductor
## ANCOMBC 2.4.0 2023-10-24 [2] Bioconductor
## AneuFinder 1.30.0 2023-10-24 [2] Bioconductor
## AneuFinderData 1.29.0 2023-10-24 [2] Bioconductor
## ANF 1.24.0 2023-10-24 [2] Bioconductor
## animalcules 1.18.0 2023-10-24 [2] Bioconductor
## animation 2.7 2021-10-07 [2] CRAN (R 4.3.1)
## annaffy 1.74.0 2023-10-24 [2] Bioconductor
## anndata 0.7.5.6 2023-03-17 [2] CRAN (R 4.3.1)
## annmap 1.44.0 2023-10-24 [2] Bioconductor
## annotate 1.80.0 2023-10-24 [2] Bioconductor
## annotation 1.27.0 2023-10-24 [2] Bioconductor
## AnnotationDbi 1.64.0 2023-10-24 [2] Bioconductor
## AnnotationFilter 1.26.0 2023-10-24 [2] Bioconductor
## AnnotationForge 1.44.0 2023-10-24 [2] Bioconductor
## AnnotationHub 3.10.0 2023-10-24 [2] Bioconductor
## AnnotationHubData 1.32.0 2023-10-24 [2] Bioconductor
## annotationTools 1.76.0 2023-10-24 [2] Bioconductor
## annotatr 1.28.0 2023-10-24 [2] Bioconductor
## anocva 0.1.1 2017-11-10 [2] CRAN (R 4.3.1)
## anota 1.50.0 2023-10-24 [2] Bioconductor
## anota2seq 1.24.0 2023-10-24 [2] Bioconductor
## antiProfiles 1.42.0 2023-10-24 [2] Bioconductor
## antiProfilesData 1.37.0 2023-10-24 [2] Bioconductor
## AnVIL 1.14.0 2023-10-24 [2] Bioconductor
## AnVILBilling 1.12.0 2023-10-24 [2] Bioconductor
## AnVILPublish 1.12.0 2023-10-24 [2] Bioconductor
## AnVILWorkflow 1.2.0 2023-10-24 [2] Bioconductor
## anyLib 1.0.5 2018-11-05 [2] CRAN (R 4.3.1)
## anytime 0.3.9 2020-08-27 [2] CRAN (R 4.3.1)
## aod 1.3.2 2022-04-02 [2] CRAN (R 4.3.1)
## aods3 0.4-1.2 2022-07-08 [2] CRAN (R 4.3.1)
## APAlyzer 1.16.0 2023-10-24 [2] Bioconductor
## apcluster 1.4.11 2023-09-19 [2] CRAN (R 4.3.1)
## apComplex 2.68.0 2023-10-24 [2] Bioconductor
## ape 5.7-1 2023-03-13 [2] CRAN (R 4.3.1)
## apeglm 1.24.0 2023-10-24 [2] Bioconductor
## APL 1.6.0 2023-10-24 [2] Bioconductor
## aplot 0.2.2 2023-10-06 [2] CRAN (R 4.3.1)
## appreci8R 1.20.0 2023-10-24 [2] Bioconductor
## aracne.networks 1.27.0 2023-10-24 [2] Bioconductor
## archive 1.1.6 2023-09-18 [2] CRAN (R 4.3.1)
## argparse 2.2.2 2023-02-15 [2] CRAN (R 4.3.1)
## argparser 0.7.1 2021-03-08 [2] CRAN (R 4.3.1)
## aricode 1.0.3 2023-10-20 [2] CRAN (R 4.3.1)
## arm 1.13-1 2022-08-28 [2] CRAN (R 4.3.1)
## aroma.affymetrix 3.2.1 2022-07-18 [2] CRAN (R 4.3.1)
## aroma.apd 0.7.0 2023-06-23 [2] CRAN (R 4.3.1)
## aroma.core 3.3.0 2022-11-15 [2] CRAN (R 4.3.1)
## aroma.light 3.32.0 2023-10-24 [2] Bioconductor
## arrangements 1.1.9 2020-09-13 [2] CRAN (R 4.3.1)
## ArrayExpress 1.62.0 2023-10-24 [2] Bioconductor
## arrayhelpers 1.1-0 2020-02-04 [2] CRAN (R 4.3.1)
## arrayMvout 1.60.0 2023-10-24 [2] Bioconductor
## arrayQuality 1.80.0 2023-10-24 [2] Bioconductor
## arrayQualityMetrics 3.58.0 2023-10-24 [2] Bioconductor
## arrays 1.29.0 2023-10-24 [2] Bioconductor
## ARRmData 1.37.0 2023-10-24 [2] Bioconductor
## ARRmNormalization 1.42.0 2023-10-24 [2] Bioconductor
## arrow 13.0.0.1 2023-09-22 [2] CRAN (R 4.3.1)
## arsenal 3.6.3 2021-06-04 [2] CRAN (R 4.3.1)
## artMS 1.20.0 2023-10-24 [2] Bioconductor
## arules 1.7-6 2023-03-23 [2] CRAN (R 4.3.1)
## ASAFE 1.28.0 2023-10-24 [2] Bioconductor
## ASEB 1.46.0 2023-10-24 [2] Bioconductor
## ASGSCA 1.36.0 2023-10-24 [2] Bioconductor
## ash 1.0-15 2015-09-01 [2] CRAN (R 4.3.1)
## AshkenazimSonChr21 1.31.0 2023-10-24 [2] Bioconductor
## ashr 2.2-63 2023-08-21 [2] CRAN (R 4.3.1)
## ASICS 2.18.0 2023-10-24 [2] Bioconductor
## ASICSdata 1.21.0 2023-10-24 [2] Bioconductor
## AsioHeaders 1.22.1-2 2022-12-08 [2] CRAN (R 4.3.1)
## askpass 1.2.0 2023-09-03 [2] CRAN (R 4.3.1)
## ASpli 2.12.0 2023-10-24 [2] Bioconductor
## assertive 0.3-6 2020-08-01 [2] CRAN (R 4.3.1)
## assertive.base 0.0-9 2021-02-08 [2] CRAN (R 4.3.1)
## assertive.code 0.0-4 2023-05-30 [2] CRAN (R 4.3.1)
## assertive.data 0.0-3 2018-11-21 [2] CRAN (R 4.3.1)
## assertive.data.uk 0.0-2 2018-10-21 [2] CRAN (R 4.3.1)
## assertive.data.us 0.0-2 2018-10-21 [2] CRAN (R 4.3.1)
## assertive.datetimes 0.0-3 2020-07-30 [2] CRAN (R 4.3.1)
## assertive.files 0.0-2 2016-05-10 [2] CRAN (R 4.3.1)
## assertive.matrices 0.0-2 2018-11-20 [2] CRAN (R 4.3.1)
## assertive.models 0.0-2 2018-10-21 [2] CRAN (R 4.3.1)
## assertive.numbers 0.0-2 2016-05-09 [2] CRAN (R 4.3.1)
## assertive.properties 0.0-5 2022-04-21 [2] CRAN (R 4.3.1)
## assertive.reflection 0.0-5 2020-07-31 [2] CRAN (R 4.3.1)
## assertive.sets 0.0-3 2016-12-30 [2] CRAN (R 4.3.1)
## assertive.strings 0.0-3 2016-05-10 [2] CRAN (R 4.3.1)
## assertive.types 0.0-3 2016-12-30 [2] CRAN (R 4.3.1)
## assertthat 0.2.1 2019-03-21 [2] CRAN (R 4.3.1)
## AssessORF 1.20.0 2023-10-24 [2] Bioconductor
## AssessORFData 1.19.0 2023-10-24 [2] Bioconductor
## ASSET 2.20.0 2023-10-24 [2] Bioconductor
## ASSIGN 1.38.0 2023-10-24 [2] Bioconductor
## ASURAT 1.6.0 2023-10-24 [2] Bioconductor
## ATACCoGAPS 1.4.0 2023-10-24 [2] Bioconductor
## ATACseqQC 1.26.0 2023-10-24 [2] Bioconductor
## ATACseqTFEA 1.4.0 2023-10-24 [2] Bioconductor
## atena 1.8.0 2023-10-24 [2] Bioconductor
## ath1121501cdf 2.18.0 2023-06-22 [2] Bioconductor
## atSNP 1.18.0 2023-10-24 [2] Bioconductor
## attempt 0.3.1 2020-05-03 [2] CRAN (R 4.3.1)
## attract 1.54.0 2023-10-24 [2] Bioconductor
## AUCell 1.24.0 2023-10-24 [2] Bioconductor
## automap 1.1-9 2023-03-23 [2] CRAN (R 4.3.1)
## autonomics 1.10.0 2023-10-24 [2] Bioconductor
## av 0.8.6 2023-10-16 [2] CRAN (R 4.3.1)
## available 1.1.0 2022-07-10 [2] CRAN (R 4.3.1)
## AWFisher 1.16.0 2023-10-24 [2] Bioconductor
## aws 2.5-3 2023-06-21 [2] CRAN (R 4.3.1)
## aws.s3 0.3.21 2020-04-07 [2] CRAN (R 4.3.1)
## aws.signature 0.6.0 2020-06-01 [2] CRAN (R 4.3.1)
## awsMethods 1.1-1 2019-05-08 [2] CRAN (R 4.3.1)
## awst 1.10.0 2023-10-24 [2] Bioconductor
## AzureAuth 1.3.3 2021-09-13 [2] CRAN (R 4.3.1)
## AzureGraph 1.3.4 2023-09-06 [2] CRAN (R 4.3.1)
## AzureRMR 2.4.4 2023-09-21 [2] CRAN (R 4.3.1)
## AzureStor 3.7.0 2022-05-25 [2] CRAN (R 4.3.1)
## BaalChIP 1.28.0 2023-10-24 [2] Bioconductor
## babelgene 22.9 2022-09-29 [2] CRAN (R 4.3.1)
## backbone 2.1.2 2023-02-13 [2] CRAN (R 4.3.1)
## backports 1.4.1 2021-12-13 [2] CRAN (R 4.3.1)
## bacon 1.30.0 2023-10-24 [2] Bioconductor
## BADER 1.40.0 2023-10-24 [2] Bioconductor
## badger 0.2.3 2023-01-28 [2] CRAN (R 4.3.1)
## BadRegionFinder 1.30.0 2023-10-24 [2] Bioconductor
## BAGS 2.42.0 2023-10-24 [2] Bioconductor
## ballgown 2.34.0 2023-10-24 [2] Bioconductor
## bambu 3.4.0 2023-10-24 [2] Bioconductor
## bamlss 1.2-1 2023-07-04 [2] CRAN (R 4.3.1)
## bamsignals 1.34.0 2023-10-24 [2] Bioconductor
## BANDITS 1.18.0 2023-10-24 [2] Bioconductor
## bandle 1.6.0 2023-10-24 [2] Bioconductor
## banocc 1.26.0 2023-10-24 [2] Bioconductor
## barcodetrackR 1.10.0 2023-10-24 [2] Bioconductor
## base * 4.3.1 2023-06-20 [3] local
## base64 2.0.1 2022-08-19 [2] CRAN (R 4.3.1)
## base64enc 0.1-3 2015-07-28 [2] CRAN (R 4.3.1)
## base64url 1.4 2018-05-14 [2] CRAN (R 4.3.1)
## basecallQC 1.26.0 2023-10-24 [2] Bioconductor
## baseline 1.3-4 2022-07-06 [2] CRAN (R 4.3.1)
## BaseSpaceR 1.46.0 2023-10-24 [2] Bioconductor
## Basic4Cseq 1.38.0 2023-10-24 [2] Bioconductor
## BASiCS 2.14.0 2023-10-24 [2] Bioconductor
## BASiCStan 1.4.0 2023-10-24 [2] Bioconductor
## BasicSTARRseq 1.30.0 2023-10-24 [2] Bioconductor
## basilisk 1.14.0 2023-10-24 [2] Bioconductor
## basilisk.utils 1.14.0 2023-10-24 [2] Bioconductor
## batchelor 1.18.0 2023-10-24 [2] Bioconductor
## BatchJobs 1.9 2022-03-21 [2] CRAN (R 4.3.1)
## BatchQC 1.30.0 2023-10-24 [2] Bioconductor
## batchtools 0.9.17 2023-04-20 [2] CRAN (R 4.3.1)
## BayesKnockdown 1.28.0 2023-10-24 [2] Bioconductor
## bayesm 3.1-6 2023-09-23 [2] CRAN (R 4.3.1)
## BayesSpace 1.12.0 2023-10-24 [2] Bioconductor
## bayestestR 0.13.1 2023-04-07 [2] CRAN (R 4.3.1)
## bayNorm 1.20.0 2023-10-24 [2] Bioconductor
## baySeq 2.36.0 2023-10-24 [2] Bioconductor
## BB 2019.10-1 2019-10-18 [2] CRAN (R 4.3.1)
## BBCAnalyzer 1.32.0 2023-10-24 [2] Bioconductor
## BBmisc 1.13 2022-09-29 [2] CRAN (R 4.3.1)
## bbmle 1.0.25 2022-05-11 [2] CRAN (R 4.3.1)
## bbotk 0.7.2 2022-12-08 [2] CRAN (R 4.3.1)
## bcellViper 1.37.0 2023-10-24 [2] Bioconductor
## bcp 4.0.3 2018-08-13 [2] CRAN (R 4.3.1)
## BCRANK 1.64.0 2023-10-24 [2] Bioconductor
## bcSeq 1.24.0 2023-10-24 [2] Bioconductor
## BDMMAcorrect 1.20.0 2023-10-24 [2] Bioconductor
## bdsmatrix 1.3-6 2022-06-03 [2] CRAN (R 4.3.1)
## beachmat 2.18.0 2023-10-24 [2] Bioconductor
## beachmat.hdf5 1.0.0 2023-10-24 [2] Bioconductor
## beadarray 2.52.0 2023-10-24 [2] Bioconductor
## beadarrayExampleData 1.39.0 2023-10-24 [2] Bioconductor
## beadarraySNP 1.68.0 2023-10-24 [2] Bioconductor
## BeadArrayUseCases 1.39.0 2023-10-24 [2] Bioconductor
## BeadDataPackR 1.54.0 2023-10-24 [2] Bioconductor
## BeadSorted.Saliva.EPIC 1.9.0 2023-10-24 [2] Bioconductor
## beanplot 1.3.1 2022-04-09 [2] CRAN (R 4.3.1)
## BEARscc 1.22.0 2023-10-24 [2] Bioconductor
## BEAT 1.40.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## BEclear 2.18.0 2023-10-24 [2] Bioconductor
## BEDMatrix 2.0.3 2020-07-08 [2] CRAN (R 4.3.1)
## beer 1.6.0 2023-10-24 [2] Bioconductor
## beeswarm 0.4.0 2021-06-01 [2] CRAN (R 4.3.1)
## bench 1.1.3 2023-05-04 [2] CRAN (R 4.3.1)
## benchdamic 1.8.0 2023-10-24 [2] Bioconductor
## benchmarkfdrData2019 1.15.0 2023-10-24 [2] Bioconductor
## benchmarkme 1.0.8 2022-06-12 [2] CRAN (R 4.3.1)
## benchmarkmeData 1.0.4 2020-04-23 [2] CRAN (R 4.3.1)
## berryFunctions 1.22.0 2023-04-12 [2] CRAN (R 4.3.1)
## bestNormalize 1.9.1 2023-08-18 [2] CRAN (R 4.3.1)
## beta7 1.39.0 2023-10-24 [2] Bioconductor
## betareg 3.1-4 2021-02-09 [2] CRAN (R 4.3.1)
## bezier 1.1.2 2018-12-14 [2] CRAN (R 4.3.1)
## BG2 1.2.0 2023-10-24 [2] Bioconductor
## BgeeCall 1.18.0 2023-10-24 [2] Bioconductor
## BgeeDB 2.28.0 2023-10-24 [2] Bioconductor
## bgx 1.68.0 2023-10-24 [2] Bioconductor
## BH 1.81.0-1 2023-01-22 [2] CRAN (R 4.3.1)
## BHC 1.54.0 2023-10-24 [2] Bioconductor
## BiasedUrn 2.0.11 2023-08-19 [2] CRAN (R 4.3.1)
## BiBitR 0.3.1 2017-06-30 [2] CRAN (R 4.3.1)
## bibtex 0.5.1 2023-01-26 [2] CRAN (R 4.3.1)
## BicARE 1.60.0 2023-10-24 [2] Bioconductor
## biclust 2.0.3.1 2023-05-19 [2] CRAN (R 4.3.1)
## BiFET 1.22.0 2023-10-24 [2] Bioconductor
## biganalytics 1.1.21 2020-06-09 [2] CRAN (R 4.3.1)
## bigassertr 0.1.6 2023-01-10 [2] CRAN (R 4.3.1)
## bigD 0.2.0 2022-09-05 [2] CRAN (R 4.3.1)
## BiGGR 1.38.0 2023-10-24 [2] Bioconductor
## biglm 0.9-2.1 2020-11-27 [2] CRAN (R 4.3.1)
## bigmelon 1.28.0 2023-10-24 [2] Bioconductor
## bigmemory 4.6.1 2022-05-02 [2] CRAN (R 4.3.1)
## bigmemory.sri 0.1.6 2022-11-09 [2] CRAN (R 4.3.1)
## bigparallelr 0.3.2 2021-10-02 [2] CRAN (R 4.3.1)
## bigPint 1.18.0 2023-10-24 [2] Bioconductor
## bigreadr 0.2.5 2022-12-06 [2] CRAN (R 4.3.1)
## bigrquery 1.4.2 2023-04-20 [2] CRAN (R 4.3.1)
## bigsnpr 1.12.2 2023-03-28 [2] CRAN (R 4.3.1)
## bigsparser 0.6.1 2022-06-07 [2] CRAN (R 4.3.1)
## bigstatsr 1.5.12 2022-10-14 [2] CRAN (R 4.3.1)
## bigutilsr 0.3.4 2021-04-13 [2] CRAN (R 4.3.1)
## billboarder 0.4.1 2023-09-29 [2] CRAN (R 4.3.1)
## BindingSiteFinder 2.0.0 2023-10-24 [2] Bioconductor
## binom 1.1-1.1 2022-05-02 [2] CRAN (R 4.3.1)
## binr 1.1.1 2022-06-26 [2] CRAN (R 4.3.1)
## bio3d 2.4-4 2022-10-26 [2] CRAN (R 4.3.1)
## bioassayR 1.40.0 2023-10-24 [2] Bioconductor
## Biobase 2.62.0 2023-10-24 [2] Bioconductor
## biobroom 1.34.0 2023-10-24 [2] Bioconductor
## biobtreeR 1.14.0 2023-10-24 [2] Bioconductor
## bioCancer 1.30.0 2023-10-24 [2] Bioconductor
## BioCartaImage 1.0.0 2023-10-24 [2] Bioconductor
## BiocBaseUtils 1.4.0 2023-10-24 [2] Bioconductor
## BiocBook 1.0.0 2023-10-24 [2] Bioconductor
## BiocBookDemo 1.0.0 2023-10-25 [1] local
## BiocCheck 1.38.0 2023-10-24 [2] Bioconductor
## BiocFHIR 1.4.0 2023-10-24 [2] Bioconductor
## BiocFileCache 2.10.0 2023-10-24 [2] Bioconductor
## BiocGenerics 0.48.0 2023-10-24 [2] Bioconductor
## biocGraph 1.64.0 2023-10-24 [2] Bioconductor
## BiocHail 1.2.0 2023-10-24 [2] Bioconductor
## BiocHubsShiny 1.2.0 2023-10-24 [2] Bioconductor
## BiocIO 1.12.0 2023-10-24 [2] Bioconductor
## BiocManager 1.30.22 2023-08-08 [2] CRAN (R 4.3.1)
## BiocMetaWorkflow 1.25.0 2023-10-24 [2] Bioconductor
## BiocNeighbors 1.20.0 2023-10-24 [2] Bioconductor
## BiocOncoTK 1.22.0 2023-10-24 [2] Bioconductor
## BioCor 1.26.0 2023-10-24 [2] Bioconductor
## BiocParallel 1.36.0 2023-10-24 [2] Bioconductor
## BiocPkgTools 1.20.0 2023-10-24 [2] Bioconductor
## BiocSet 1.16.0 2023-10-24 [2] Bioconductor
## BiocSingular 1.18.0 2023-10-24 [2] Bioconductor
## BiocSklearn 1.24.0 2023-10-24 [2] Bioconductor
## BiocStyle 2.30.0 2023-10-24 [2] Bioconductor
## biocthis 1.12.0 2023-10-24 [2] Bioconductor
## BiocVersion 3.18.0 2023-10-24 [2] Bioconductor
## biocViews 1.70.0 2023-10-24 [2] Bioconductor
## BiocWorkflowTools 1.28.0 2023-10-24 [2] Bioconductor
## biodb 1.10.0 2023-10-24 [2] Bioconductor
## biodbChebi 1.8.0 2023-10-24 [2] Bioconductor
## biodbExpasy 1.6.0 2023-10-24 [2] Bioconductor
## biodbHmdb 1.8.0 2023-10-24 [2] Bioconductor
## biodbKegg 1.8.0 2023-10-24 [2] Bioconductor
## biodbLipidmaps 1.8.0 2023-10-24 [2] Bioconductor
## biodbMirbase 1.5.1 2023-10-04 [2] Bioconductor
## biodbNcbi 1.6.0 2023-10-24 [2] Bioconductor
## biodbNci 1.6.0 2023-10-24 [2] Bioconductor
## biodbUniprot 1.8.0 2023-10-24 [2] Bioconductor
## bioDist 1.74.0 2023-10-24 [2] Bioconductor
## BioImageDbs 1.9.0 2023-10-24 [2] Bioconductor
## BioMark 0.4.5 2015-09-07 [2] CRAN (R 4.3.1)
## biomaRt 2.58.0 2023-10-24 [2] Bioconductor
## BioMartGOGeneSets 0.99.11 2023-10-25 [2] Bioconductor
## biomartr 1.0.5 2023-10-04 [2] CRAN (R 4.3.1)
## biomformat 1.30.0 2023-10-24 [2] Bioconductor
## BioMM 1.18.0 2023-10-24 [2] Bioconductor
## BioMVCClass 1.70.0 2023-10-24 [2] Bioconductor
## BioNAR 1.4.0 2023-10-24 [2] Bioconductor
## BioNERO 1.10.0 2023-10-24 [2] Bioconductor
## BioNet 1.62.0 2023-10-24 [2] Bioconductor
## bionetdata 1.1 2022-09-12 [2] CRAN (R 4.3.1)
## BioNetStat 1.22.0 2023-10-24 [2] Bioconductor
## BioPlex 1.7.0 2023-10-24 [2] Bioconductor
## BioQC 1.30.0 2023-10-24 [2] Bioconductor
## biosigner 1.30.0 2023-10-24 [2] Bioconductor
## Biostrings 2.70.0 2023-10-24 [2] Bioconductor
## BioTIP 1.16.0 2023-10-24 [2] Bioconductor
## biotmle 1.26.0 2023-10-24 [2] Bioconductor
## biotmleData 1.25.0 2023-10-24 [2] Bioconductor
## biovizBase 1.50.0 2023-10-24 [2] Bioconductor
## BiRewire 3.34.0 2023-10-24 [2] Bioconductor
## biscuiteer 1.16.0 2023-10-24 [2] Bioconductor
## biscuiteerData 1.15.3 2023-10-24 [2] Bioconductor
## BiSeq 1.42.0 2023-10-24 [2] Bioconductor
## BisqueRNA 1.0.5 2021-05-23 [2] CRAN (R 4.3.1)
## bit 4.0.5 2022-11-15 [2] CRAN (R 4.3.1)
## bit64 4.0.5 2020-08-30 [2] CRAN (R 4.3.1)
## bitops 1.0-7 2021-04-24 [2] CRAN (R 4.3.1)
## biwt 1.0.1 2022-06-13 [2] CRAN (R 4.3.1)
## blacksheepr 1.16.0 2023-10-24 [2] Bioconductor
## bladderbatch 1.39.0 2023-10-24 [2] Bioconductor
## BlandAltmanLeh 0.3.1 2015-12-23 [2] CRAN (R 4.3.1)
## blastula 0.3.4 2023-09-23 [2] CRAN (R 4.3.1)
## blima 1.36.0 2023-10-24 [2] Bioconductor
## blimaTestingData 1.21.0 2023-10-24 [2] Bioconductor
## BLMA 1.26.0 2023-10-24 [2] Bioconductor
## blme 1.0-5 2021-01-05 [2] CRAN (R 4.3.1)
## blob 1.2.4 2023-03-17 [2] CRAN (R 4.3.1)
## blockmodeling 1.1.5 2023-08-23 [2] CRAN (R 4.3.1)
## BloodCancerMultiOmics2017 1.21.0 2023-10-24 [2] Bioconductor
## BloodGen3Module 1.10.0 2023-10-24 [2] Bioconductor
## bluster 1.12.0 2023-10-24 [2] Bioconductor
## BMA 3.18.17 2022-04-22 [2] CRAN (R 4.3.1)
## bmp 0.3 2017-09-11 [2] CRAN (R 4.3.1)
## bnbc 1.24.0 2023-10-24 [2] Bioconductor
## bnem 1.10.0 2023-10-24 [2] Bioconductor
## bnlearn 4.9 2023-09-07 [2] CRAN (R 4.3.1)
## bnstruct 1.0.14 2022-11-30 [2] CRAN (R 4.3.1)
## bnviewer 0.1.6 2020-09-14 [2] CRAN (R 4.3.1)
## BOBaFIT 1.6.0 2023-10-24 [2] Bioconductor
## bodymapRat 1.17.0 2023-10-24 [2] Bioconductor
## bold 1.3.0 2023-05-02 [2] CRAN (R 4.3.1)
## bookdown 0.36 2023-10-16 [2] CRAN (R 4.3.1)
## BoolNet 2.1.9 2023-10-02 [2] CRAN (R 4.3.1)
## boot 1.3-28.1 2022-11-22 [3] CRAN (R 4.3.1)
## bootstrap 2019.6 2019-06-17 [2] CRAN (R 4.3.1)
## borealis 1.6.0 2023-10-24 [2] Bioconductor
## BP4RNAseq 1.13.0 2023-10-24 [2] Bioconductor
## BPRMeth 1.28.0 2023-10-24 [2] Bioconductor
## BRAIN 1.48.0 2023-10-24 [2] Bioconductor
## brainflowprobes 1.16.0 2023-10-24 [2] Bioconductor
## branchpointer 1.28.0 2023-10-24 [2] Bioconductor
## breakaway 4.8.4 2022-11-22 [2] CRAN (R 4.3.1)
## breakpointR 1.20.0 2023-10-24 [2] Bioconductor
## breakpointRdata 1.19.0 2023-10-24 [2] Bioconductor
## breastCancerMAINZ 1.39.0 2023-10-24 [2] Bioconductor
## breastCancerNKI 1.39.0 2023-10-24 [2] Bioconductor
## breastCancerTRANSBIG 1.39.0 2023-10-24 [2] Bioconductor
## breastCancerUNT 1.39.0 2023-10-24 [2] Bioconductor
## breastCancerUPP 1.39.0 2023-10-24 [2] Bioconductor
## breastCancerVDX 1.39.0 2023-10-24 [2] Bioconductor
## brendaDb 1.16.0 2023-10-24 [2] Bioconductor
## brew 1.0-8 2022-09-29 [2] CRAN (R 4.3.1)
## brgedata 1.23.1 2023-10-24 [2] Bioconductor
## BRGenomics 1.14.0 2023-10-24 [2] Bioconductor
## brglm 0.7.2 2021-04-22 [2] CRAN (R 4.3.1)
## BridgeDbR 2.12.0 2023-10-24 [2] Bioconductor
## brio 1.1.3 2021-11-30 [2] CRAN (R 4.3.1)
## BRISC 1.0.5 2022-04-29 [2] CRAN (R 4.3.1)
## bronchialIL13 1.39.0 2023-10-24 [2] Bioconductor
## broom 1.0.5 2023-06-09 [2] CRAN (R 4.3.1)
## broom.mixed 0.2.9.4 2022-04-17 [2] CRAN (R 4.3.1)
## BrowserViz 2.24.0 2023-10-24 [2] Bioconductor
## bs4Dash 2.3.0 2023-06-15 [2] CRAN (R 4.3.1)
## BSDA 1.2.2 2023-09-18 [2] CRAN (R 4.3.1)
## BSgenome 1.70.0 2023-10-24 [2] Bioconductor
## BSgenome.Athaliana.TAIR.TAIR9 1.3.1000 2023-06-20 [2] Bioconductor
## BSgenome.Btaurus.UCSC.bosTau6 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Btaurus.UCSC.bosTau6.masked 1.3.99 2023-06-20 [2] Bioconductor
## BSgenome.Celegans.UCSC.ce10 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Celegans.UCSC.ce11 1.4.2 2023-06-20 [2] Bioconductor
## BSgenome.Celegans.UCSC.ce2 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Dmelanogaster.UCSC.dm3 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Dmelanogaster.UCSC.dm6 1.4.1 2023-06-20 [2] Bioconductor
## BSgenome.Drerio.UCSC.danRer10 1.4.2 2023-06-20 [2] Bioconductor
## BSgenome.Drerio.UCSC.danRer7 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Ecoli.NCBI.20080805 1.3.1000 2023-06-20 [2] Bioconductor
## BSgenome.Ggallus.UCSC.galGal3 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.1000genomes.hs37d5 0.99.1 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.NCBI.GRCh38 1.3.1000 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg18 1.3.1000 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg18.masked 1.3.99 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg19 1.4.3 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg19.masked 1.3.993 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg38 1.4.5 2023-06-20 [2] Bioconductor
## BSgenome.Hsapiens.UCSC.hg38.masked 1.4.5 2023-06-20 [2] Bioconductor
## BSgenome.Mmulatta.UCSC.rheMac10 1.4.2 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm10 1.4.3 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm10.masked 1.4.3 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm8 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm8.masked 1.3.99 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm9 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Mmusculus.UCSC.mm9.masked 1.3.99 2023-06-20 [2] Bioconductor
## BSgenome.Rnorvegicus.UCSC.rn4 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Rnorvegicus.UCSC.rn5 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Rnorvegicus.UCSC.rn5.masked 1.3.99 2023-06-20 [2] Bioconductor
## BSgenome.Rnorvegicus.UCSC.rn6 1.4.1 2023-06-20 [2] Bioconductor
## BSgenome.Rnorvegicus.UCSC.rn7 1.4.3 2023-06-20 [2] Bioconductor
## BSgenome.Scerevisiae.UCSC.sacCer1 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Scerevisiae.UCSC.sacCer2 1.4.0 2023-06-20 [2] Bioconductor
## BSgenome.Scerevisiae.UCSC.sacCer3 1.4.0 2023-06-20 [2] Bioconductor
## BSgenomeForge 1.2.0 2023-10-24 [2] Bioconductor
## bslib 0.5.1 2023-08-11 [2] CRAN (R 4.3.1)
## bsplus 0.1.4 2022-11-16 [2] CRAN (R 4.3.1)
## bsseq 1.38.0 2023-10-24 [2] Bioconductor
## bsseqData 0.39.0 2023-10-24 [2] Bioconductor
## BubbleTree 2.32.0 2023-10-24 [2] Bioconductor
## BufferedMatrix 1.66.0 2023-10-24 [2] Bioconductor
## BufferedMatrixMethods 1.66.0 2023-10-24 [2] Bioconductor
## bugsigdbr 1.8.0 2023-10-24 [2] Bioconductor
## BUMHMM 1.26.0 2023-10-24 [2] Bioconductor
## bumphunter 1.44.0 2023-10-24 [2] Bioconductor
## BumpyMatrix 1.10.0 2023-10-24 [2] Bioconductor
## BUS 1.58.0 2023-10-24 [2] Bioconductor
## BUScorrect 1.20.0 2023-10-24 [2] Bioconductor
## BUSpaRse 1.16.0 2023-10-24 [2] Bioconductor
## BUSseq 1.8.0 2023-10-24 [2] Bioconductor
## butcher 0.3.3 2023-08-23 [2] CRAN (R 4.3.1)
## BWStest 0.2.3 2023-10-10 [2] CRAN (R 4.3.1)
## c3net 1.1.1.1 2022-06-24 [2] CRAN (R 4.3.1)
## C50 0.1.8 2023-02-08 [2] CRAN (R 4.3.1)
## ca 0.71.1 2020-01-24 [2] CRAN (R 4.3.1)
## cachem 1.0.8 2023-05-01 [2] CRAN (R 4.3.1)
## cadd.v1.6.hg19 3.18.1 2023-10-25 [2] Bioconductor
## cadd.v1.6.hg38 3.18.1 2023-10-25 [2] Bioconductor
## CaDrA 1.0.0 2023-10-24 [2] Bioconductor
## CAEN 1.10.0 2023-10-24 [2] Bioconductor
## CAFE 1.38.0 2023-10-24 [2] Bioconductor
## CAGEfightR 1.22.0 2023-10-24 [2] Bioconductor
## cageminer 1.8.0 2023-10-24 [2] Bioconductor
## CAGEr 2.8.0 2023-10-24 [2] Bioconductor
## CAGEWorkflow 1.19.0 2023-10-24 [2] Bioconductor
## Cairo 1.6-1 2023-08-18 [2] CRAN (R 4.3.1)
## calibrate 1.7.7 2020-06-19 [2] CRAN (R 4.3.1)
## callr 3.7.3 2022-11-02 [2] CRAN (R 4.3.1)
## calm 1.16.0 2023-10-24 [2] Bioconductor
## CAMERA 1.58.0 2023-10-24 [2] Bioconductor
## canceR 1.36.0 2023-10-24 [2] Bioconductor
## cancerclass 1.46.0 2023-10-24 [2] Bioconductor
## cancerdata 1.39.0 2023-10-24 [2] Bioconductor
## CancerSubtypes 1.28.0 2023-10-24 [2] Bioconductor
## capushe 1.1.1 2016-04-19 [2] CRAN (R 4.3.1)
## car 3.1-2 2023-03-30 [2] CRAN (R 4.3.1)
## carData 3.0-5 2022-01-06 [2] CRAN (R 4.3.1)
## cardelino 1.4.0 2023-10-24 [2] Bioconductor
## Cardinal 3.4.0 2023-10-24 [2] Bioconductor
## CardinalIO 1.0.0 2023-10-24 [2] Bioconductor
## CardinalWorkflows 1.33.0 2023-10-24 [2] Bioconductor
## caret 6.0-94 2023-03-21 [2] CRAN (R 4.3.1)
## caretEnsemble 2.0.3 2023-09-20 [2] CRAN (R 4.3.1)
## CARNIVAL 2.12.0 2023-10-24 [2] Bioconductor
## casper 2.36.0 2023-10-24 [2] Bioconductor
## CATALYST 1.26.0 2023-10-24 [2] Bioconductor
## catdata 1.2.3 2023-05-23 [2] CRAN (R 4.3.1)
## Category 2.68.0 2023-10-24 [2] Bioconductor
## categoryCompare 1.46.0 2023-10-24 [2] Bioconductor
## CatEncoders 0.1.1 2017-03-08 [2] CRAN (R 4.3.1)
## caTools 1.18.2 2021-03-28 [2] CRAN (R 4.3.1)
## CATT 2.0 2017-05-19 [2] CRAN (R 4.3.1)
## CausalR 1.34.0 2023-10-24 [2] Bioconductor
## cba 0.2-23 2022-12-07 [2] CRAN (R 4.3.1)
## cbaf 1.24.0 2023-10-24 [2] Bioconductor
## CBEA 1.2.0 2023-10-24 [2] Bioconductor
## cBioPortalData 2.14.0 2023-10-24 [2] Bioconductor
## CBNplot 1.2.0 2023-10-24 [2] Bioconductor
## cbpManager 1.10.0 2023-10-24 [2] Bioconductor
## ccaPP 0.3.3 2019-12-09 [2] CRAN (R 4.3.1)
## ccdata 1.27.0 2023-10-24 [2] Bioconductor
## ccfindR 1.22.0 2023-10-24 [2] Bioconductor
## ccImpute 1.4.0 2023-10-24 [2] Bioconductor
## CCl4 1.39.0 2023-10-24 [2] Bioconductor
## ccmap 1.28.0 2023-10-24 [2] Bioconductor
## CCP 1.2 2022-04-21 [2] CRAN (R 4.3.1)
## CCPlotR 1.0.0 2023-10-24 [2] Bioconductor
## CCPROMISE 1.28.0 2023-10-24 [2] Bioconductor
## ccrepe 1.38.0 2023-10-24 [2] Bioconductor
## ccTensor 1.0.2 2021-08-12 [2] CRAN (R 4.3.1)
## ccTutorial 1.39.1 2023-10-24 [2] Bioconductor
## CDFt 1.2 2021-02-18 [2] CRAN (R 4.3.1)
## CDI 1.0.0 2023-10-24 [2] Bioconductor
## celaref 1.20.0 2023-10-24 [2] Bioconductor
## celarefData 1.19.0 2023-10-24 [2] Bioconductor
## celda 1.18.0 2023-10-24 [2] Bioconductor
## celestial 1.4.6 2018-11-29 [2] CRAN (R 4.3.1)
## CellaRepertorium 1.12.0 2023-10-24 [2] Bioconductor
## CellBarcode 1.8.0 2023-10-24 [2] Bioconductor
## cellbaseR 1.26.0 2023-10-24 [2] Bioconductor
## CellBench 1.18.0 2023-10-24 [2] Bioconductor
## celldex 1.11.1 2023-10-24 [2] Bioconductor
## cellHTS2 2.66.0 2023-10-24 [2] Bioconductor
## CelliD 1.10.0 2023-10-24 [2] Bioconductor
## cellity 1.30.0 2023-10-24 [2] Bioconductor
## CellMapper 1.28.0 2023-10-24 [2] Bioconductor
## CellMapperData 1.27.0 2023-10-24 [2] Bioconductor
## cellmigRation 1.10.0 2023-10-24 [2] Bioconductor
## CellMixS 1.18.0 2023-10-24 [2] Bioconductor
## CellNOptR 1.48.0 2023-10-24 [2] Bioconductor
## cellranger 1.1.0 2016-07-27 [2] CRAN (R 4.3.1)
## cellscape 1.26.0 2023-10-24 [2] Bioconductor
## CellScore 1.22.0 2023-10-24 [2] Bioconductor
## CellTrails 1.20.0 2023-10-24 [2] Bioconductor
## cellxgenedp 1.6.0 2023-10-24 [2] Bioconductor
## CEMiTool 1.26.0 2023-10-24 [2] Bioconductor
## censcyt 1.10.0 2023-10-24 [2] Bioconductor
## Cepo 1.8.0 2023-10-24 [2] Bioconductor
## ceRNAnetsim 1.14.0 2023-10-24 [2] Bioconductor
## CeTF 1.14.0 2023-10-24 [2] Bioconductor
## CexoR 1.40.0 2023-10-24 [2] Bioconductor
## CFAssay 1.36.0 2023-10-24 [2] Bioconductor
## cfdnakit 1.0.0 2023-10-24 [2] Bioconductor
## cfDNAPro 1.8.0 2023-10-24 [2] Bioconductor
## cfTools 1.2.0 2023-10-24 [2] Bioconductor
## cfToolsData 0.99.4 2023-10-24 [2] Bioconductor
## CGEN 3.38.0 2023-10-24 [2] Bioconductor
## CGHbase 1.62.0 2023-10-24 [2] Bioconductor
## CGHcall 2.64.0 2023-10-24 [2] Bioconductor
## cghMCR 1.60.0 2023-10-24 [2] Bioconductor
## CGHnormaliter 1.56.0 2023-10-24 [2] Bioconductor
## CGHregions 1.60.0 2023-10-24 [2] Bioconductor
## ChAMP 2.32.0 2023-10-24 [2] Bioconductor
## ChAMPdata 2.33.0 2023-10-24 [2] Bioconductor
## changepoint 2.2.4 2022-11-03 [2] CRAN (R 4.3.1)
## changepoint.np 1.0.5 2022-10-20 [2] CRAN (R 4.3.1)
## checkmate 2.2.0 2023-04-27 [2] CRAN (R 4.3.1)
## ChemmineDrugs 1.0.2 2023-06-20 [2] Bioconductor
## ChemmineOB 1.40.0 2023-10-24 [2] Bioconductor
## ChemmineR 3.54.0 2023-10-24 [2] Bioconductor
## chemometrics 1.4.4 2023-08-25 [2] CRAN (R 4.3.1)
## ChemoSpec 6.1.9 2023-06-07 [2] CRAN (R 4.3.1)
## ChemoSpecUtils 1.0.3 2023-05-30 [2] CRAN (R 4.3.1)
## CHETAH 1.18.0 2023-10-24 [2] Bioconductor
## ChIC.data 1.21.1 2023-10-24 [2] Bioconductor
## Chicago 1.30.0 2023-10-24 [2] Bioconductor
## chihaya 1.2.0 2023-10-24 [2] Bioconductor
## chimeraviz 1.28.0 2023-10-24 [2] Bioconductor
## ChimpHumanBrainData 1.39.0 2023-10-24 [2] Bioconductor
## ChIPanalyser 1.24.0 2023-10-24 [2] Bioconductor
## ChIPComp 1.32.0 2023-10-24 [2] Bioconductor
## chipenrich 2.26.0 2023-10-24 [2] Bioconductor
## chipenrich.data 2.25.0 2023-10-24 [2] Bioconductor
## ChIPexoQual 1.26.0 2023-10-24 [2] Bioconductor
## ChIPexoQualExample 1.25.0 2023-10-24 [2] Bioconductor
## chipPCR 1.0-2 2021-03-05 [2] CRAN (R 4.3.1)
## ChIPpeakAnno 3.36.0 2023-10-24 [2] Bioconductor
## ChIPQC 1.38.0 2023-10-24 [2] Bioconductor
## ChIPseeker 1.38.0 2023-10-24 [2] Bioconductor
## chipseq 1.52.0 2023-10-24 [2] Bioconductor
## chipseqDB 1.27.0 2023-10-24 [2] Bioconductor
## chipseqDBData 1.17.0 2023-10-24 [2] Bioconductor
## ChIPseqR 1.56.0 2023-10-24 [2] Bioconductor
## ChIPsim 1.56.0 2023-10-24 [2] Bioconductor
## ChIPXpress 1.46.0 2023-10-24 [2] Bioconductor
## ChIPXpressData 1.39.0 2023-10-24 [2] Bioconductor
## chk 0.9.1 2023-10-06 [2] CRAN (R 4.3.1)
## chopsticks 1.68.0 2023-10-24 [2] Bioconductor
## chromDraw 2.32.0 2023-10-24 [2] Bioconductor
## ChromHeatMap 1.56.0 2023-10-24 [2] Bioconductor
## chromhmmData 0.99.2 2023-10-25 [2] Bioconductor
## chromote 0.1.2 2023-08-11 [2] CRAN (R 4.3.1)
## chromPlot 1.30.0 2023-10-24 [2] Bioconductor
## ChromSCape 1.12.0 2023-10-24 [2] Bioconductor
## chromstaR 1.28.0 2023-10-24 [2] Bioconductor
## chromstaRData 1.27.0 2023-10-24 [2] Bioconductor
## chromVAR 1.24.0 2023-10-24 [2] Bioconductor
## chron 2.3-61 2023-05-02 [2] CRAN (R 4.3.1)
## CHRONOS 1.30.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## cicero 1.20.0 2023-10-24 [2] Bioconductor
## cicerone 1.0.4 2021-01-10 [2] CRAN (R 4.3.1)
## CIMICE 1.10.0 2023-10-24 [2] Bioconductor
## CINdex 1.30.0 2023-10-24 [2] Bioconductor
## circlize 0.4.15 2022-05-10 [2] CRAN (R 4.3.1)
## circRNAprofiler 1.16.0 2023-10-24 [2] Bioconductor
## CircSeqAlignTk 1.4.0 2023-10-24 [2] Bioconductor
## CircStats 0.2-6 2018-07-01 [2] CRAN (R 4.3.1)
## circular 0.5-0 2023-09-05 [2] CRAN (R 4.3.1)
## cisPath 1.42.0 2023-10-24 [2] Bioconductor
## CiteFuse 1.14.0 2023-10-24 [2] Bioconductor
## Ckmeans.1d.dp 4.3.5 2023-08-19 [2] CRAN (R 4.3.1)
## class 7.3-22 2023-05-03 [3] CRAN (R 4.3.1)
## ClassifyR 3.6.0 2023-10-24 [2] Bioconductor
## classInt 0.4-10 2023-09-05 [2] CRAN (R 4.3.1)
## cleanUpdTSeq 1.40.0 2023-10-24 [2] Bioconductor
## cleaver 1.40.0 2023-10-24 [2] Bioconductor
## clevRvis 1.2.0 2023-10-24 [2] Bioconductor
## cli 3.6.1 2023-03-23 [2] CRAN (R 4.3.1)
## clinfun 1.1.5 2023-10-19 [2] CRAN (R 4.3.1)
## clippda 1.52.0 2023-10-24 [2] Bioconductor
## clipper 1.42.0 2023-10-24 [2] local
## clipr 0.8.0 2022-02-22 [2] CRAN (R 4.3.1)
## cliProfiler 1.8.0 2023-10-24 [2] Bioconductor
## cliqueMS 1.16.0 2023-10-24 [2] Bioconductor
## clisymbols 1.2.0 2017-05-21 [2] CRAN (R 4.3.1)
## CLL 1.41.0 2023-10-24 [2] Bioconductor
## CLLmethylation 1.21.0 2023-10-24 [2] Bioconductor
## clock 0.7.0 2023-05-15 [2] CRAN (R 4.3.1)
## Clomial 1.38.0 2023-10-24 [2] Bioconductor
## clst 1.50.0 2023-10-24 [2] Bioconductor
## clstutils 1.50.0 2023-10-24 [2] Bioconductor
## clue 0.3-65 2023-09-23 [2] CRAN (R 4.3.1)
## ClueR 1.4 2018-09-29 [2] CRAN (R 4.3.1)
## CluMSID 1.18.0 2023-10-24 [2] Bioconductor
## CluMSIDdata 1.17.0 2023-10-24 [2] Bioconductor
## clustComp 1.30.0 2023-10-24 [2] Bioconductor
## cluster 2.1.4 2022-08-22 [3] CRAN (R 4.3.1)
## clusterCons 1.2 2022-02-22 [2] CRAN (R 4.3.1)
## clusterExperiment 2.22.0 2023-10-24 [2] Bioconductor
## clusterGeneration 1.3.8 2023-08-16 [2] CRAN (R 4.3.1)
## ClusterJudge 1.24.0 2023-10-24 [2] Bioconductor
## clusterProfiler 4.10.0 2023-10-24 [2] Bioconductor
## ClusterR 1.3.1 2023-04-29 [2] CRAN (R 4.3.1)
## clusterRepro 0.9 2018-10-15 [2] CRAN (R 4.3.1)
## clusterSeq 1.26.0 2023-10-24 [2] Bioconductor
## ClusterSignificance 1.30.0 2023-10-24 [2] Bioconductor
## clusterSim 0.51-3 2023-06-10 [2] CRAN (R 4.3.1)
## clusterStab 1.74.0 2023-10-24 [2] Bioconductor
## clustifyr 1.14.0 2023-10-24 [2] Bioconductor
## clustifyrdatahub 1.11.0 2023-10-24 [2] Bioconductor
## ClustIRR 1.0.0 2023-10-24 [2] Bioconductor
## clustree 0.5.0 2022-06-25 [2] CRAN (R 4.3.1)
## clustvarsel 2.3.4 2020-12-16 [2] CRAN (R 4.3.1)
## clv 0.3-2.4 2023-09-28 [2] CRAN (R 4.3.1)
## clValid 0.7 2021-02-14 [2] CRAN (R 4.3.1)
## CMA 1.60.0 2023-10-24 [2] Bioconductor
## cMAP 1.15.1 2023-06-20 [2] local
## cMap2data 1.37.0 2023-10-24 [2] Bioconductor
## cmapR 1.14.0 2023-10-24 [2] Bioconductor
## cmdfun 1.0.2 2020-10-10 [2] CRAN (R 4.3.1)
## CMplot 4.4.3 2023-10-20 [2] CRAN (R 4.3.1)
## cn.farms 1.50.0 2023-10-24 [2] Bioconductor
## cn.mops 1.48.0 2023-10-24 [2] Bioconductor
## CNAnorm 1.48.0 2023-10-24 [2] Bioconductor
## CNEr 1.38.0 2023-10-24 [2] Bioconductor
## CNORdt 1.44.0 2023-10-24 [2] Bioconductor
## CNORfeeder 1.42.0 2023-10-24 [2] Bioconductor
## CNORfuzzy 1.44.0 2023-10-24 [2] Bioconductor
## CNORode 1.44.0 2023-10-24 [2] Bioconductor
## CNTools 1.58.0 2023-10-24 [2] Bioconductor
## CNVfilteR 1.16.0 2023-10-24 [2] Bioconductor
## CNVgears 1.10.0 2023-10-24 [2] Bioconductor
## cnvGSA 1.46.0 2023-10-24 [2] Bioconductor
## cnvGSAdata 1.37.0 2023-10-24 [2] Bioconductor
## CNViz 1.10.0 2023-10-24 [2] Bioconductor
## CNVMetrics 1.6.0 2023-10-24 [2] Bioconductor
## CNVPanelizer 1.34.0 2023-10-24 [2] Bioconductor
## CNVRanger 1.18.0 2023-10-24 [2] Bioconductor
## CNVrd2 1.40.0 2023-10-24 [2] Bioconductor
## cobalt 4.5.1 2023-04-28 [2] CRAN (R 4.3.1)
## cobs 1.3-5 2022-05-30 [2] CRAN (R 4.3.1)
## CoCiteStats 1.74.0 2023-10-24 [2] Bioconductor
## COCOA 2.16.0 2023-10-24 [2] Bioconductor
## coda 0.19-4 2020-09-30 [2] CRAN (R 4.3.1)
## CodeDepends 0.6.5 2018-07-17 [2] CRAN (R 4.3.1)
## codelink 1.70.0 2023-10-24 [2] Bioconductor
## codetools 0.2-19 2023-02-01 [3] CRAN (R 4.3.1)
## CODEX 1.34.0 2023-10-24 [2] Bioconductor
## CoGAPS 3.22.0 2023-10-24 [2] Bioconductor
## cogena 1.36.0 2023-10-24 [2] Bioconductor
## cogeqc 1.6.0 2023-10-24 [2] Bioconductor
## Cogito 1.8.0 2023-10-24 [2] Bioconductor
## coGPS 1.46.0 2023-10-24 [2] Bioconductor
## COHCAP 1.48.0 2023-10-24 [2] Bioconductor
## COHCAPanno 1.37.0 2023-10-24 [2] Bioconductor
## coin 1.4-3 2023-09-27 [2] CRAN (R 4.3.1)
## cola 2.8.0 2023-10-24 [2] Bioconductor
## collapse 2.0.3 2023-10-17 [2] CRAN (R 4.3.1)
## collections 0.3.7 2023-01-05 [2] CRAN (R 4.3.1)
## colonCA 1.43.0 2023-10-24 [2] Bioconductor
## colorBlindness 0.1.9 2021-04-17 [2] CRAN (R 4.3.1)
## colorRamps 2.3.1 2022-05-02 [2] CRAN (R 4.3.1)
## colorspace 2.1-0 2023-01-23 [2] CRAN (R 4.3.1)
## colourpicker 1.3.0 2023-08-21 [2] CRAN (R 4.3.1)
## colourvalues 0.3.9 2023-04-11 [2] CRAN (R 4.3.1)
## comapr 1.6.0 2023-10-24 [2] Bioconductor
## combi 1.14.0 2023-10-24 [2] Bioconductor
## combinat 0.0-8 2012-10-29 [2] CRAN (R 4.3.1)
## coMET 1.34.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## coMethDMR 1.6.0 2023-10-24 [2] Bioconductor
## common 1.0.9 2023-09-18 [2] CRAN (R 4.3.1)
## commonmark 1.9.0 2023-03-17 [2] CRAN (R 4.3.1)
## compareGroups 4.7.2 2023-10-11 [2] CRAN (R 4.3.1)
## compartmap 1.20.0 2023-10-24 [2] Bioconductor
## COMPASS 1.40.0 2023-10-24 [2] Bioconductor
## compcodeR 1.38.0 2023-10-24 [2] Bioconductor
## compEpiTools 1.36.0 2023-10-24 [2] Bioconductor
## compiler 4.3.1 2023-06-20 [3] local
## ComplexHeatmap 2.18.0 2023-10-24 [2] Bioconductor
## ComplexUpset 1.3.3 2021-12-11 [2] CRAN (R 4.3.1)
## COMPoissonReg 0.8.0 2022-12-02 [2] CRAN (R 4.3.1)
## compositions 2.0-6 2023-04-13 [2] CRAN (R 4.3.1)
## CompoundDb 1.6.0 2023-10-24 [2] Bioconductor
## CompQuadForm 1.4.3 2017-04-12 [2] CRAN (R 4.3.1)
## ComPrAn 1.10.0 2023-10-24 [2] Bioconductor
## compSPOT 1.0.0 2023-10-24 [2] Bioconductor
## concaveman 1.1.0 2020-05-11 [2] CRAN (R 4.3.1)
## concordexR 1.2.0 2023-10-24 [2] Bioconductor
## condformat 0.10.1 2023-10-08 [2] CRAN (R 4.3.1)
## condiments 1.10.0 2023-10-24 [2] Bioconductor
## conditionz 0.1.0 2019-04-24 [2] CRAN (R 4.3.1)
## CONFESS 1.30.0 2023-10-24 [2] Bioconductor
## CONFESSdata 1.29.0 2023-10-24 [2] Bioconductor
## config 0.3.2 2023-08-30 [2] CRAN (R 4.3.1)
## configr 0.3.5 2020-07-17 [2] CRAN (R 4.3.1)
## confintr 1.0.2 2023-06-04 [2] CRAN (R 4.3.1)
## conflicted 1.2.0 2023-02-01 [2] CRAN (R 4.3.1)
## conicfit 1.0.4 2015-10-05 [2] CRAN (R 4.3.1)
## ConnectivityMap 1.37.0 2023-10-24 [2] Bioconductor
## consensus 1.20.0 2023-10-24 [2] Bioconductor
## ConsensusClusterPlus 1.66.0 2023-10-24 [2] Bioconductor
## consensusDE 1.20.0 2023-10-24 [2] Bioconductor
## consensusOV 1.24.0 2023-10-24 [2] Bioconductor
## consensusSeekeR 1.30.0 2023-10-24 [2] Bioconductor
## consICA 2.0.0 2023-10-24 [2] Bioconductor
## ConsRank 2.1.3 2023-03-23 [2] CRAN (R 4.3.1)
## CONSTANd 1.10.0 2023-10-24 [2] Bioconductor
## contiBAIT 1.30.0 2023-10-24 [2] Bioconductor
## contrast 0.24.2 2022-10-05 [2] CRAN (R 4.3.1)
## conumee 1.36.0 2023-10-24 [2] Bioconductor
## convert 1.78.0 2023-10-24 [2] Bioconductor
## coop 0.6-3 2021-09-19 [2] CRAN (R 4.3.1)
## copa 1.70.0 2023-10-24 [2] Bioconductor
## COPDSexualDimorphism.data 1.37.0 2023-10-24 [2] Bioconductor
## copula 1.1-2 2023-01-25 [2] CRAN (R 4.3.1)
## CopyhelpeR 1.33.0 2023-10-24 [2] Bioconductor
## CopyNeutralIMA 1.19.0 2023-10-24 [2] Bioconductor
## CopyNumberPlots 1.18.0 2023-10-24 [2] Bioconductor
## coRdon 1.20.0 2023-10-24 [2] Bioconductor
## CoRegNet 1.40.0 2023-10-24 [2] Bioconductor
## CoreGx 2.6.0 2023-10-24 [2] Bioconductor
## Cormotif 1.48.0 2023-10-24 [2] Bioconductor
## corncob 0.3.2 2023-08-31 [2] CRAN (R 4.3.1)
## coro 1.0.3 2022-07-19 [2] CRAN (R 4.3.1)
## corpcor 1.6.10 2021-09-16 [2] CRAN (R 4.3.1)
## corral 1.12.0 2023-10-24 [2] Bioconductor
## CORREP 1.68.0 2023-10-24 [2] Bioconductor
## corrgram 1.14 2021-04-29 [2] CRAN (R 4.3.1)
## corrplot 0.92 2021-11-18 [2] CRAN (R 4.3.1)
## corrr 0.4.4 2022-08-16 [2] CRAN (R 4.3.1)
## coseq 1.26.0 2023-10-24 [2] Bioconductor
## CoSIA 1.2.0 2023-10-24 [2] Bioconductor
## CoSIAdata 1.1.0 2023-10-24 [2] Bioconductor
## COSMIC.67 1.37.0 2023-10-24 [2] Bioconductor
## cosmiq 1.36.0 2023-10-24 [2] Bioconductor
## cosmosR 1.10.0 2023-10-24 [2] Bioconductor
## COSNet 1.36.0 2023-10-24 [2] Bioconductor
## COTAN 2.2.0 2023-10-24 [2] Bioconductor
## countrycode 1.5.0 2023-05-30 [2] CRAN (R 4.3.1)
## countsimQC 1.20.0 2023-10-24 [2] Bioconductor
## covEB 1.28.0 2023-10-24 [2] Bioconductor
## CoverageView 1.40.0 2023-10-24 [2] Bioconductor
## covr 3.6.3 2023-10-11 [2] CRAN (R 4.3.1)
## covRNA 1.28.0 2023-10-24 [2] Bioconductor
## cowplot 1.1.1 2020-12-30 [2] CRAN (R 4.3.1)
## cp4p 0.3.6 2019-02-24 [2] CRAN (R 4.3.1)
## CpGassoc 2.60 2017-05-30 [2] CRAN (R 4.3.1)
## cplm 0.7-11 2023-04-18 [2] CRAN (R 4.3.1)
## cpp11 0.4.6 2023-08-10 [2] CRAN (R 4.3.1)
## cpvSNP 1.34.0 2023-10-24 [2] Bioconductor
## cqn 1.48.0 2023-10-24 [2] Bioconductor
## crayon 1.5.2 2022-09-29 [2] CRAN (R 4.3.1)
## CRCL18 1.21.0 2023-10-24 [2] Bioconductor
## credentials 2.0.1 2023-09-06 [2] CRAN (R 4.3.1)
## CRImage 1.50.0 2023-10-24 [2] Bioconductor
## crisprBase 1.6.0 2023-10-24 [2] Bioconductor
## crisprBowtie 1.6.0 2023-10-24 [2] Bioconductor
## crisprBwa 1.6.0 2023-10-24 [2] Bioconductor
## crisprDesign 1.4.0 2023-10-24 [2] Bioconductor
## crisprScore 1.6.0 2023-10-24 [2] Bioconductor
## crisprScoreData 1.5.0 2023-10-24 [2] Bioconductor
## CRISPRseek 1.42.0 2023-10-24 [2] Bioconductor
## crisprseekplus 1.28.0 2023-10-24 [2] Bioconductor
## CrispRVariants 1.30.0 2023-10-24 [2] Bioconductor
## crisprVerse 1.4.0 2023-10-24 [2] Bioconductor
## crisprViz 1.4.0 2023-10-24 [2] Bioconductor
## crlmm 1.60.0 2023-10-24 [2] Bioconductor
## crmn 0.0.21 2020-02-10 [2] CRAN (R 4.3.1)
## crochet 2.3.0 2020-05-20 [2] CRAN (R 4.3.1)
## crossmeta 1.28.0 2023-10-24 [2] Bioconductor
## crosstalk 1.2.0 2021-11-04 [2] CRAN (R 4.3.1)
## crul 1.4.0 2023-05-17 [2] CRAN (R 4.3.1)
## CSAR 1.54.0 2023-10-24 [2] Bioconductor
## csaw 1.36.0 2023-10-24 [2] Bioconductor
## csawBook 1.10.0 2023-10-25 [2] Bioconductor
## csawUsersGuide 1.19.0 2023-10-24 [2] Bioconductor
## csdR 1.8.0 2023-10-24 [2] Bioconductor
## CSSP 1.40.0 2023-10-24 [2] Bioconductor
## CSSQ 1.14.0 2023-10-24 [2] Bioconductor
## ctc 1.76.0 2023-10-24 [2] Bioconductor
## CTCF 0.99.11 2023-10-25 [2] Bioconductor
## CTdata 1.2.0 2023-10-24 [2] Bioconductor
## CTDquerier 2.10.0 2023-10-24 [2] Bioconductor
## cTRAP 1.20.0 2023-10-24 [2] Bioconductor
## ctsGE 1.28.0 2023-10-24 [2] Bioconductor
## CTSV 1.4.0 2023-10-24 [2] Bioconductor
## cubature 2.1.0 2023-06-11 [2] CRAN (R 4.3.1)
## Cubist 0.4.2.1 2023-03-09 [2] CRAN (R 4.3.1)
## cummeRbund 2.44.0 2023-10-24 [2] Bioconductor
## curatedAdipoArray 1.13.0 2023-10-24 [2] Bioconductor
## curatedAdipoChIP 1.17.0 2023-10-24 [2] Bioconductor
## curatedAdipoRNA 1.17.0 2023-10-24 [2] Bioconductor
## CuratedAtlasQueryR 1.0.0 2023-10-24 [2] Bioconductor
## curatedBladderData 1.37.0 2023-10-24 [2] Bioconductor
## curatedBreastData 2.29.0 2023-10-24 [2] Bioconductor
## curatedCRCData 2.33.0 2023-10-24 [2] Bioconductor
## curatedMetagenomicData 3.9.1 2023-10-24 [2] Bioconductor
## curatedOvarianData 1.39.1 2023-10-24 [2] Bioconductor
## curatedTBData 1.7.0 2023-10-24 [2] Bioconductor
## curatedTCGAData 1.23.7 2023-10-24 [2] Bioconductor
## curl 5.1.0 2023-10-02 [2] CRAN (R 4.3.1)
## customCMPdb 1.12.0 2023-10-24 [2] Bioconductor
## customProDB 1.42.0 2023-10-24 [2] Bioconductor
## cvar 0.5 2022-11-03 [2] CRAN (R 4.3.1)
## cvAUC 1.1.4 2022-01-17 [2] CRAN (R 4.3.1)
## cvms 1.6.0 2023-06-29 [2] CRAN (R 4.3.1)
## cvTools 0.3.2 2012-05-14 [2] CRAN (R 4.3.1)
## CVXR 1.0-11 2022-10-30 [2] CRAN (R 4.3.1)
## cyanoFilter 1.10.0 2023-10-24 [2] Bioconductor
## cycle 1.56.0 2023-10-24 [2] Bioconductor
## cyclocomp 1.1.1 2023-08-30 [2] CRAN (R 4.3.1)
## cydar 1.26.0 2023-10-24 [2] Bioconductor
## CytoDx 1.22.0 2023-10-24 [2] Bioconductor
## CyTOFpower 1.8.0 2023-10-24 [2] Bioconductor
## cytofQC 1.2.0 2023-10-24 [2] Bioconductor
## cytofWorkflow 1.27.0 2023-10-24 [2] Bioconductor
## CytoGLMM 1.10.0 2023-10-24 [2] Bioconductor
## cytoKernel 1.8.0 2023-10-24 [2] Bioconductor
## cytolib 2.14.0 2023-10-24 [2] Bioconductor
## cytomapper 1.14.0 2023-10-24 [2] Bioconductor
## cytoMEM 1.6.0 2023-10-24 [2] Bioconductor
## cytometree 2.0.2 2019-12-04 [2] CRAN (R 4.3.1)
## CytoML 2.14.0 2023-10-24 [2] Bioconductor
## CytoPipeline 1.2.0 2023-10-24 [2] Bioconductor
## CytoPipelineGUI 1.0.0 2023-10-24 [2] Bioconductor
## cytoviewer 1.2.0 2023-10-24 [2] Bioconductor
## dada2 1.30.0 2023-10-24 [2] Bioconductor
## dagitty 0.3-1 2021-01-21 [2] CRAN (R 4.3.1)
## dagLogo 1.40.0 2023-10-24 [2] Bioconductor
## daMA 1.74.0 2023-10-24 [2] Bioconductor
## DAMEfinder 1.14.0 2023-10-24 [2] Bioconductor
## DaMiRseq 2.14.0 2023-10-24 [2] Bioconductor
## DAPAR 1.34.0 2023-10-24 [2] Bioconductor
## DAPARdata 1.31.2 2023-10-24 [2] Bioconductor
## DART 1.50.0 2023-10-24 [2] Bioconductor
## dashboardthemes 1.1.6 2022-07-13 [2] CRAN (R 4.3.1)
## data.table 1.14.8 2023-02-17 [2] CRAN (R 4.3.1)
## data.tree 1.0.0 2020-08-03 [2] CRAN (R 4.3.1)
## datamods 1.4.2 2023-09-26 [2] CRAN (R 4.3.1)
## datasets * 4.3.1 2023-06-20 [3] local
## DataVisualizations 1.3.2 2023-10-10 [2] CRAN (R 4.3.1)
## datawizard 0.9.0 2023-09-15 [2] CRAN (R 4.3.1)
## davidTiling 1.41.0 2023-10-24 [2] Bioconductor
## DBI 1.1.3 2022-06-18 [2] CRAN (R 4.3.1)
## dbplyr 2.3.4 2023-09-26 [2] CRAN (R 4.3.1)
## dbscan 1.1-11 2022-10-27 [2] CRAN (R 4.3.1)
## dcanr 1.18.0 2023-10-24 [2] Bioconductor
## DCATS 1.0.0 2023-10-24 [2] Bioconductor
## dce 1.10.0 2023-10-24 [2] Bioconductor
## dcGSA 1.30.0 2023-10-24 [2] Bioconductor
## ddCt 1.58.0 2023-10-24 [2] Bioconductor
## ddPCRclust 1.22.0 2023-10-24 [2] Bioconductor
## DDRTree 0.1.5 2017-04-30 [2] CRAN (R 4.3.1)
## dearseq 1.14.0 2023-10-24 [2] Bioconductor
## debCAM 1.20.0 2023-10-24 [2] Bioconductor
## debrowser 1.30.0 2023-10-24 [2] Bioconductor
## debugme 1.1.0 2017-10-22 [2] CRAN (R 4.3.1)
## DECIPHER 2.30.0 2023-10-24 [2] Bioconductor
## deco 1.18.0 2023-10-24 [2] Bioconductor
## decompTumor2Sig 2.18.0 2023-10-24 [2] Bioconductor
## DeconRNASeq 1.44.0 2023-10-24 [2] Bioconductor
## deconstructSigs 1.8.0 2016-07-29 [2] CRAN (R 4.3.1)
## decontam 1.22.0 2023-10-24 [2] Bioconductor
## decontX 1.0.0 2023-10-24 [2] Bioconductor
## deconvR 1.8.0 2023-10-24 [2] Bioconductor
## decoupleR 2.8.0 2023-10-24 [2] Bioconductor
## DeepPINCS 1.10.0 2023-10-24 [2] Bioconductor
## deepSNV 1.48.0 2023-10-24 [2] Bioconductor
## DEFormats 1.30.0 2023-10-24 [2] Bioconductor
## DegNorm 1.12.0 2023-10-24 [2] Bioconductor
## DEGraph 1.54.0 2023-10-24 [2] Bioconductor
## DEGreport 1.38.0 2023-10-24 [2] Bioconductor
## DEGseq 1.56.0 2023-10-24 [2] Bioconductor
## Delaporte 8.3.0 2023-10-02 [2] CRAN (R 4.3.1)
## DelayedArray 0.28.0 2023-10-24 [2] Bioconductor
## DelayedDataFrame 1.18.0 2023-10-24 [2] Bioconductor
## DelayedMatrixStats 1.24.0 2023-10-24 [2] Bioconductor
## DelayedRandomArray 1.10.0 2023-10-24 [2] Bioconductor
## DelayedTensor 1.8.0 2023-10-24 [2] Bioconductor
## deldir 1.0-9 2023-05-17 [2] CRAN (R 4.3.1)
## DELocal 1.2.0 2023-10-24 [2] Bioconductor
## deltaCaptureC 1.16.0 2023-10-24 [2] Bioconductor
## deltaGseg 1.42.0 2023-10-24 [2] Bioconductor
## DeMAND 1.32.0 2023-10-24 [2] Bioconductor
## deming 1.4 2018-11-13 [2] CRAN (R 4.3.1)
## DeMixT 1.18.0 2023-10-24 [2] Bioconductor
## demuxmix 1.4.0 2023-10-24 [2] Bioconductor
## demuxSNP 1.0.0 2023-10-24 [2] Bioconductor
## dendextend 1.17.1 2023-03-25 [2] CRAN (R 4.3.1)
## dendsort 0.3.4 2021-04-20 [2] CRAN (R 4.3.1)
## densEstBayes 1.0-2.2 2023-03-31 [2] CRAN (R 4.3.1)
## densvis 1.12.0 2023-10-24 [2] Bioconductor
## DEoptimR 1.1-3 2023-10-07 [2] CRAN (R 4.3.1)
## DEP 1.24.0 2023-10-24 [2] Bioconductor
## DepecheR 1.18.0 2023-10-24 [2] Bioconductor
## DepInfeR 1.6.0 2023-10-24 [2] Bioconductor
## depmap 1.15.0 2023-10-24 [2] Bioconductor
## depmixS4 1.5-0 2021-05-12 [2] CRAN (R 4.3.1)
## DEqMS 1.20.0 2023-10-24 [2] Bioconductor
## derfinder 1.36.0 2023-10-24 [2] Bioconductor
## derfinderData 2.19.0 2023-10-24 [2] Bioconductor
## derfinderHelper 1.36.0 2023-10-24 [2] Bioconductor
## derfinderPlot 1.36.0 2023-10-24 [2] Bioconductor
## Deriv 4.1.3 2021-02-24 [2] CRAN (R 4.3.1)
## desc 1.4.2 2022-09-08 [2] CRAN (R 4.3.1)
## DEScan2 1.22.0 2023-10-24 [2] Bioconductor
## DescTools 0.99.50 2023-09-06 [2] CRAN (R 4.3.1)
## DESeq2 1.42.0 2023-10-24 [2] Bioconductor
## DEsingle 1.22.0 2023-10-24 [2] Bioconductor
## deSolve 1.38 2023-09-05 [2] CRAN (R 4.3.1)
## DeSousa2013 1.37.0 2023-10-24 [2] Bioconductor
## DESpace 1.2.0 2023-10-24 [2] Bioconductor
## destiny 3.16.0 2023-10-24 [2] Bioconductor
## DEsubs 1.28.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## detectseparation 0.3 2022-08-26 [2] CRAN (R 4.3.1)
## devtools 2.4.5 2022-10-11 [2] CRAN (R 4.3.1)
## DEWSeq 1.16.0 2023-10-24 [2] Bioconductor
## DExMA 1.10.0 2023-10-24 [2] Bioconductor
## DExMAdata 1.9.0 2023-10-24 [2] Bioconductor
## DEXSeq 1.48.0 2023-10-24 [2] Bioconductor
## DFP 1.60.0 2023-10-24 [2] Bioconductor
## DGEobj 1.1.2 2022-05-16 [2] CRAN (R 4.3.1)
## DGEobj.utils 1.0.6 2022-05-19 [2] CRAN (R 4.3.1)
## dgof 1.4 2022-06-16 [2] CRAN (R 4.3.1)
## diagram 1.6.5 2020-09-30 [2] CRAN (R 4.3.1)
## DiagrammeR 1.0.10 2023-05-18 [2] CRAN (R 4.3.1)
## DIAlignR 2.10.0 2023-10-24 [2] Bioconductor
## diceR 2.1.0 2023-09-28 [2] CRAN (R 4.3.1)
## dichromat 2.0-0.1 2022-05-02 [2] CRAN (R 4.3.1)
## DiffBind 3.12.0 2023-10-24 [2] Bioconductor
## diffcoexp 1.22.0 2023-10-24 [2] Bioconductor
## DiffCorr 0.4.3 2023-08-25 [2] CRAN (R 4.3.1)
## diffcyt 1.22.0 2023-10-24 [2] Bioconductor
## DifferentialRegulation 2.0.0 2023-10-24 [2] Bioconductor
## diffGeneAnalysis 1.84.0 2023-10-24 [2] Bioconductor
## diffHic 1.34.0 2023-10-24 [2] Bioconductor
## DiffLogo 2.26.0 2023-10-24 [2] Bioconductor
## diffloopdata 1.29.0 2023-10-24 [2] Bioconductor
## diffobj 0.3.5 2021-10-05 [2] CRAN (R 4.3.1)
## diffr 0.1 2017-02-27 [2] CRAN (R 4.3.1)
## diffuStats 1.22.0 2023-10-24 [2] Bioconductor
## diffUTR 1.10.0 2023-10-24 [2] Bioconductor
## diffviewer 0.1.1 2021-09-30 [2] CRAN (R 4.3.1)
## digest 0.6.33 2023-07-07 [2] CRAN (R 4.3.1)
## diggit 1.34.0 2023-10-24 [2] Bioconductor
## diggitdata 1.33.0 2023-10-24 [2] Bioconductor
## Dino 1.8.0 2023-10-24 [2] Bioconductor
## diptest 0.76-0 2021-05-04 [2] CRAN (R 4.3.1)
## dir.expiry 1.10.0 2023-10-24 [2] Bioconductor
## directlabels 2023.8.25 2023-09-01 [2] CRAN (R 4.3.1)
## Director 1.28.0 2023-10-24 [2] Bioconductor
## directPA 1.5 2020-11-16 [2] CRAN (R 4.3.1)
## DirichletMultinomial 1.44.0 2023-10-24 [2] Bioconductor
## DirichletReg 0.7-1 2021-05-18 [2] CRAN (R 4.3.1)
## dirmult 0.1.3-5 2022-03-21 [2] CRAN (R 4.3.1)
## discordant 1.26.0 2023-10-24 [2] Bioconductor
## DiscoRhythm 1.18.0 2023-10-24 [2] Bioconductor
## distances 0.1.9 2023-01-27 [2] CRAN (R 4.3.1)
## distill 1.6 2023-10-06 [2] CRAN (R 4.3.1)
## distillery 1.2-1 2021-05-19 [2] CRAN (R 4.3.1)
## distinct 1.14.0 2023-10-24 [2] Bioconductor
## distr 2.9.2 2023-05-08 [2] CRAN (R 4.3.1)
## distrEx 2.9.0 2022-11-15 [2] CRAN (R 4.3.1)
## distributional 0.3.2 2023-03-22 [2] CRAN (R 4.3.1)
## distributions3 0.2.1 2022-09-07 [2] CRAN (R 4.3.1)
## dittoSeq 1.14.0 2023-10-24 [2] Bioconductor
## divergence 1.18.0 2023-10-24 [2] Bioconductor
## dixonTest 1.0.4 2022-08-22 [2] CRAN (R 4.3.1)
## dks 1.48.0 2023-10-24 [2] Bioconductor
## DLBCL 1.41.1 2023-10-24 [2] Bioconductor
## dlstats 0.1.7 2023-05-24 [2] CRAN (R 4.3.1)
## DMCFB 1.16.0 2023-10-24 [2] Bioconductor
## DMCHMM 1.24.0 2023-10-24 [2] Bioconductor
## DmelSGI 1.33.0 2023-10-24 [2] Bioconductor
## dml 1.1.0 2015-08-29 [2] CRAN (R 4.3.1)
## DMRcaller 1.34.0 2023-10-24 [2] Bioconductor
## DMRcate 2.16.0 2023-10-24 [2] Bioconductor
## DMRcatedata 2.19.0 2023-10-24 [2] Bioconductor
## DMRforPairs 1.38.0 2023-10-24 [2] Bioconductor
## DMRScan 1.24.0 2023-10-24 [2] Bioconductor
## dmrseq 1.22.0 2023-10-24 [2] Bioconductor
## DMwR2 0.0.2 2016-10-13 [2] CRAN (R 4.3.1)
## DNABarcodeCompatibility 1.18.0 2023-10-24 [2] Bioconductor
## DNABarcodes 1.32.0 2023-10-24 [2] Bioconductor
## DNAcopy 1.76.0 2023-10-24 [2] Bioconductor
## DNAfusion 1.4.0 2023-10-24 [2] Bioconductor
## DNAshapeR 1.30.0 2023-10-24 [2] Bioconductor
## DNAZooData 1.1.0 2023-10-24 [2] Bioconductor
## dnet 1.1.7 2020-02-20 [2] CRAN (R 4.3.1)
## DO.db 2.9 2023-06-20 [2] Bioconductor
## doBy 4.6.19 2023-10-02 [2] CRAN (R 4.3.1)
## docopt 0.7.1 2020-06-24 [2] CRAN (R 4.3.1)
## doFuture 1.0.0 2023-03-24 [2] CRAN (R 4.3.1)
## doMC 1.3.8 2022-02-05 [2] CRAN (R 4.3.1)
## DominoEffect 1.22.0 2023-10-24 [2] Bioconductor
## DonaPLLP2013 1.39.0 2023-10-24 [2] Bioconductor
## doParallel 1.0.17 2022-02-07 [2] CRAN (R 4.3.1)
## doppelgangR 1.30.0 2023-10-24 [2] Bioconductor
## doRNG 1.8.6 2023-01-16 [2] CRAN (R 4.3.1)
## dorothea 1.13.0 2023-10-24 [2] Bioconductor
## Doscheda 1.24.0 2023-10-24 [2] Bioconductor
## DOSE 3.28.0 2023-10-24 [2] Bioconductor
## doseR 1.18.0 2023-10-24 [2] Bioconductor
## doSNOW 1.0.20 2022-02-04 [2] CRAN (R 4.3.1)
## dotCall64 1.1-0 2023-10-17 [2] CRAN (R 4.3.1)
## DoubleExpSeq 1.1 2015-09-04 [2] CRAN (R 4.3.1)
## doubletrouble 1.2.0 2023-10-24 [2] Bioconductor
## downlit 0.4.3 2023-06-29 [2] CRAN (R 4.3.1)
## downloader 0.4 2015-07-09 [2] CRAN (R 4.3.1)
## downloadthis 0.3.2 2022-08-16 [2] CRAN (R 4.3.1)
## dpeak 1.14.0 2023-10-24 [2] Bioconductor
## dplR 1.7.5 2023-08-30 [2] CRAN (R 4.3.1)
## dplyr 1.1.3 2023-09-03 [2] CRAN (R 4.3.1)
## dqrng 0.3.1 2023-08-30 [2] CRAN (R 4.3.1)
## drawer 0.2.0.1 2022-08-19 [2] CRAN (R 4.3.1)
## drawProteins 1.22.0 2023-10-24 [2] Bioconductor
## drc 3.0-1 2016-08-30 [2] CRAN (R 4.3.1)
## dreamlet 1.0.0 2023-10-24 [2] Bioconductor
## dressCheck 0.39.0 2023-10-24 [2] Bioconductor
## DrImpute 1.0 2017-07-15 [2] CRAN (R 4.3.1)
## DRIMSeq 1.30.0 2023-10-24 [2] Bioconductor
## DriverNet 1.42.0 2023-10-24 [2] Bioconductor
## DropletTestFiles 1.11.0 2023-10-24 [2] Bioconductor
## DropletUtils 1.22.0 2023-10-24 [2] Bioconductor
## drosgenome1.db 3.13.0 2023-06-20 [2] Bioconductor
## drosophila2probe 2.18.0 2023-06-20 [2] Bioconductor
## drtmle 1.1.2 2023-01-05 [2] CRAN (R 4.3.1)
## drugTargetInteractions 1.10.0 2023-10-24 [2] Bioconductor
## DrugVsDisease 2.44.0 2023-10-24 [2] Bioconductor
## DrugVsDiseasedata 1.37.0 2023-10-24 [2] Bioconductor
## DSS 2.50.0 2023-10-24 [2] Bioconductor
## dStruct 1.8.0 2023-10-24 [2] Bioconductor
## DT 0.30 2023-10-05 [2] CRAN (R 4.3.1)
## DTA 2.48.0 2023-10-24 [2] Bioconductor
## dtangle 2.0.9 2019-12-01 [2] CRAN (R 4.3.1)
## dtplyr 1.3.1 2023-03-22 [2] CRAN (R 4.3.1)
## dtt 0.1-2 2013-12-30 [2] CRAN (R 4.3.1)
## dtw 1.23-1 2022-09-19 [2] CRAN (R 4.3.1)
## duckdb 0.9.1 2023-10-13 [2] CRAN (R 4.3.1)
## Dune 1.14.0 2023-10-24 [2] Bioconductor
## dunn.test 1.3.5 2017-10-27 [2] CRAN (R 4.3.1)
## DuoClustering2018 1.19.0 2023-10-24 [2] Bioconductor
## dupRadar 1.32.0 2023-10-24 [2] Bioconductor
## DvDdata 1.37.0 2023-10-24 [2] Bioconductor
## dyebias 1.62.0 2023-10-24 [2] Bioconductor
## dyebiasexamples 1.41.0 2023-10-24 [2] Bioconductor
## dynamicTreeCut 1.63-1 2016-03-11 [2] CRAN (R 4.3.1)
## DynDoc 1.80.0 2023-10-24 [2] Bioconductor
## e1071 1.7-13 2023-02-01 [2] CRAN (R 4.3.1)
## earth 5.3.2 2023-01-26 [2] CRAN (R 4.3.1)
## easier 1.8.0 2023-10-24 [2] Bioconductor
## easierData 1.7.0 2023-10-24 [2] Bioconductor
## EasyCellType 1.4.0 2023-10-24 [2] Bioconductor
## easycsv 1.0.8 2018-05-21 [2] CRAN (R 4.3.1)
## easylift 1.0.0 2023-10-24 [2] Bioconductor
## easyPubMed 2.13 2019-03-29 [2] CRAN (R 4.3.1)
## easyreporting 1.14.0 2023-10-24 [2] Bioconductor
## easyRNASeq 2.38.0 2023-10-24 [2] Bioconductor
## EatonEtAlChIPseq 0.39.0 2023-10-24 [2] Bioconductor
## EBarrays 2.66.0 2023-10-24 [2] Bioconductor
## EBcoexpress 1.46.0 2023-10-24 [2] Bioconductor
## ebdbNet 1.2.8 2023-09-04 [2] CRAN (R 4.3.1)
## EBImage 4.44.0 2023-10-24 [2] Bioconductor
## EBSEA 1.30.0 2023-10-24 [2] Bioconductor
## EBSeq 2.0.0 2023-10-24 [2] Bioconductor
## EBSeqHMM 1.36.0 2023-10-24 [2] Bioconductor
## echarts4r 0.4.5 2023-06-16 [2] CRAN (R 4.3.1)
## ecodist 2.0.9 2022-05-05 [2] CRAN (R 4.3.1)
## ecolicdf 2.18.0 2023-06-20 [2] Bioconductor
## ecoliLeucine 1.41.0 2023-10-24 [2] Bioconductor
## ecolitk 1.74.0 2023-10-24 [2] Bioconductor
## ECOSolveR 0.5.5 2023-05-15 [2] CRAN (R 4.3.1)
## ecp 3.1.5 2023-07-01 [2] CRAN (R 4.3.1)
## Ecume 0.9.1 2021-03-15 [2] CRAN (R 4.3.1)
## EDASeq 2.36.0 2023-10-24 [2] Bioconductor
## edge 2.34.0 2023-10-24 [2] Bioconductor
## edgeR 4.0.0 2023-10-24 [2] Bioconductor
## EDIRquery 1.2.0 2023-10-24 [2] Bioconductor
## eds 1.4.0 2023-10-24 [2] Bioconductor
## eegc 1.28.0 2023-10-24 [2] Bioconductor
## effsize 0.8.1 2020-10-05 [2] CRAN (R 4.3.1)
## EGAD 1.30.0 2023-10-24 [2] Bioconductor
## egg 0.4.5 2019-07-13 [2] CRAN (R 4.3.1)
## EGSEA 1.30.0 2023-10-24 [2] Bioconductor
## EGSEA123 1.27.0 2023-10-24 [2] Bioconductor
## EGSEAdata 1.29.0 2023-10-24 [2] Bioconductor
## einsum 0.1.2 2023-08-28 [2] CRAN (R 4.3.1)
## eiR 1.42.0 2023-10-24 [2] Bioconductor
## eisaR 1.14.0 2023-10-24 [2] Bioconductor
## elasticnet 1.3 2020-05-15 [2] CRAN (R 4.3.1)
## elitism 1.1.1 2023-09-02 [2] CRAN (R 4.3.1)
## ellipse 0.5.0 2023-07-20 [2] CRAN (R 4.3.1)
## ellipsis 0.3.2 2021-04-29 [2] CRAN (R 4.3.1)
## ELMER 2.26.0 2023-10-24 [2] Bioconductor
## ELMER.data 2.25.0 2023-10-24 [2] Bioconductor
## elsa 1.1-28 2020-03-19 [2] CRAN (R 4.3.1)
## emdbook 1.3.13 2023-07-03 [2] CRAN (R 4.3.1)
## emdist 0.3-3 2023-08-18 [2] CRAN (R 4.3.1)
## EMDomics 2.32.0 2023-10-24 [2] Bioconductor
## emmeans 1.8.9 2023-10-17 [2] CRAN (R 4.3.1)
## emojifont 0.5.5 2021-04-20 [2] CRAN (R 4.3.1)
## EmpiricalBrownsMethod 1.30.0 2023-10-24 [2] Bioconductor
## EMT 1.3 2023-02-06 [2] CRAN (R 4.3.1)
## emtdata 1.9.0 2023-10-24 [2] Bioconductor
## ENCODExplorerData 0.99.5 2023-10-25 [2] Bioconductor
## energy 1.7-11 2022-12-22 [2] CRAN (R 4.3.1)
## english 1.2-6 2021-08-21 [2] CRAN (R 4.3.1)
## EnhancedVolcano 1.20.0 2023-10-24 [2] Bioconductor
## enhancerHomologSearch 1.8.0 2023-10-24 [2] Bioconductor
## EnMCB 1.14.0 2023-10-24 [2] Bioconductor
## ENmix 1.38.0 2023-10-24 [2] Bioconductor
## EnrichedHeatmap 1.32.0 2023-10-24 [2] Bioconductor
## EnrichmentBrowser 2.32.0 2023-10-24 [2] Bioconductor
## enrichplot 1.22.0 2023-10-24 [2] Bioconductor
## enrichR 3.2 2023-04-14 [2] CRAN (R 4.3.1)
## enrichTF 1.18.0 2023-10-24 [2] Bioconductor
## enrichViewNet 1.0.0 2023-10-24 [2] Bioconductor
## EnsDb.Hsapiens.v75 2.99.0 2023-06-20 [2] Bioconductor
## EnsDb.Hsapiens.v79 2.99.0 2023-06-20 [2] Bioconductor
## EnsDb.Hsapiens.v86 2.99.0 2023-06-20 [2] Bioconductor
## EnsDb.Mmusculus.v79 2.99.0 2023-06-20 [2] Bioconductor
## EnsDb.Rnorvegicus.v79 2.99.0 2023-06-20 [2] Bioconductor
## ensembldb 2.26.0 2023-10-24 [2] Bioconductor
## ensemblVEP 1.44.0 2023-10-24 [2] Bioconductor
## ensurer 1.1 2015-04-21 [2] CRAN (R 4.3.1)
## entropy 1.3.1 2021-10-02 [2] CRAN (R 4.3.1)
## enviPat 2.6 2022-10-21 [2] CRAN (R 4.3.1)
## EnvStats 2.8.1 2023-08-22 [2] CRAN (R 4.3.1)
## epialleleR 1.10.0 2023-10-24 [2] Bioconductor
## EpiCompare 1.6.0 2023-10-24 [2] Bioconductor
## epidecodeR 1.10.0 2023-10-24 [2] Bioconductor
## EpiDISH 2.18.0 2023-10-24 [2] Bioconductor
## epigenomix 1.42.0 2023-10-24 [2] Bioconductor
## epigraHMM 1.10.0 2023-10-24 [2] Bioconductor
## EpiMix 1.4.0 2023-10-24 [2] Bioconductor
## EpiMix.data 1.3.2 2023-10-24 [2] Bioconductor
## epimutacions 1.6.0 2023-10-24 [2] Bioconductor
## epimutacionsData 1.5.0 2023-10-24 [2] Bioconductor
## epiNEM 1.26.0 2023-10-24 [2] Bioconductor
## epiR 2.0.65 2023-09-28 [2] CRAN (R 4.3.1)
## epistack 1.8.0 2023-10-24 [2] Bioconductor
## epistasisGA 1.4.0 2023-10-24 [2] Bioconductor
## EpiTxDb 1.14.0 2023-10-24 [2] Bioconductor
## EpiTxDb.Hs.hg38 0.99.7 2023-10-25 [2] Bioconductor
## EpiTxDb.Mm.mm10 0.99.6 2023-10-25 [2] Bioconductor
## EpiTxDb.Sc.sacCer3 0.99.5 2023-10-25 [2] Bioconductor
## epivizr 2.32.0 2023-10-24 [2] Bioconductor
## epivizrChart 1.24.0 2023-10-24 [2] Bioconductor
## epivizrData 1.30.0 2023-10-24 [2] Bioconductor
## epivizrServer 1.30.0 2023-10-24 [2] Bioconductor
## epivizrStandalone 1.30.0 2023-10-24 [2] Bioconductor
## erccdashboard 1.36.0 2023-10-24 [2] Bioconductor
## erma 1.18.0 2023-10-24 [2] local
## ERSSA 1.20.0 2023-10-24 [2] Bioconductor
## esATAC 1.24.0 2023-10-24 [2] Bioconductor
## escape 1.12.0 2023-10-24 [2] Bioconductor
## escheR 1.2.0 2023-10-24 [2] Bioconductor
## esetVis 1.28.0 2023-10-24 [2] Bioconductor
## esquisse 1.1.2 2022-09-01 [2] CRAN (R 4.3.1)
## estimability 1.4.1 2022-08-05 [2] CRAN (R 4.3.1)
## estrogen 1.47.1 2023-10-24 [2] Bioconductor
## etec16s 1.29.0 2023-10-24 [2] Bioconductor
## etrunct 0.1 2016-07-04 [2] CRAN (R 4.3.1)
## eudysbiome 1.32.0 2023-10-24 [2] local
## eulerr 7.0.0 2022-12-10 [2] CRAN (R 4.3.1)
## EuPathDB 1.0.1 2023-10-25 [2] Bioconductor
## europepmc 0.4.3 2023-09-20 [2] CRAN (R 4.3.1)
## eva 0.2.6 2020-11-15 [2] CRAN (R 4.3.1)
## evaluate 0.22 2023-09-29 [2] CRAN (R 4.3.1)
## evaluomeR 1.18.0 2023-10-24 [2] Bioconductor
## evd 2.3-6.1 2022-07-04 [2] CRAN (R 4.3.1)
## EventPointer 3.10.0 2023-10-24 [2] Bioconductor
## evmix 2.12 2019-09-03 [2] CRAN (R 4.3.1)
## evobiR 1.1 2015-09-06 [2] CRAN (R 4.3.1)
## EWCE 1.10.0 2023-10-24 [2] Bioconductor
## ewceData 1.9.0 2023-10-24 [2] Bioconductor
## Exact 3.2 2022-09-25 [2] CRAN (R 4.3.1)
## exactRankTests 0.8-35 2022-04-26 [2] CRAN (R 4.3.1)
## excelR 0.4.0 2020-03-09 [2] CRAN (R 4.3.1)
## excluderanges 0.99.8 2023-10-25 [2] Bioconductor
## ExCluster 1.20.0 2023-10-24 [2] Bioconductor
## ExiMiR 2.44.0 2023-10-24 [2] Bioconductor
## exomeCopy 1.48.0 2023-10-24 [2] Bioconductor
## exomePeak2 1.14.0 2023-10-24 [2] Bioconductor
## ExperimentHub 2.10.0 2023-10-24 [2] Bioconductor
## ExperimentHubData 1.28.0 2023-10-24 [2] Bioconductor
## ExperimentSubset 1.12.0 2023-10-24 [2] Bioconductor
## ExpHunterSuite 1.11.0 2023-10-24 [2] Bioconductor
## expint 0.1-8 2022-10-28 [2] CRAN (R 4.3.1)
## ExploreModelMatrix 1.14.0 2023-10-24 [2] Bioconductor
## expm 0.999-7 2023-01-09 [2] CRAN (R 4.3.1)
## ExPosition 2.8.23 2019-01-07 [2] CRAN (R 4.3.1)
## ExpressionAtlas 1.30.0 2023-10-24 [2] Bioconductor
## ExpressionNormalizationWorkflow 1.29.0 2023-10-24 [2] Bioconductor
## ExtDist 0.7-2 2023-08-21 [2] CRAN (R 4.3.1)
## extraChIPs 1.6.0 2023-10-24 [2] Bioconductor
## extraDistr 1.9.1 2020-09-07 [2] CRAN (R 4.3.1)
## extrafont 0.19 2023-01-18 [2] CRAN (R 4.3.1)
## extrafontdb 1.0 2012-06-11 [2] CRAN (R 4.3.1)
## extRemes 2.1-3 2022-11-18 [2] CRAN (R 4.3.1)
## EZtune 3.1.1 2021-12-10 [2] CRAN (R 4.3.1)
## faahKO 1.41.0 2023-10-24 [2] Bioconductor
## fabia 2.48.0 2023-10-24 [2] Bioconductor
## fabiaData 1.39.0 2023-10-24 [2] Bioconductor
## fabricatr 1.0.0 2022-06-29 [2] CRAN (R 4.3.1)
## factDesign 1.78.0 2023-10-24 [2] Bioconductor
## factoextra 1.0.7 2020-04-01 [2] CRAN (R 4.3.1)
## FactoMineR 2.9 2023-10-12 [2] CRAN (R 4.3.1)
## factR 1.4.0 2023-10-24 [2] Bioconductor
## FamAgg 1.30.0 2023-10-24 [2] Bioconductor
## famat 1.12.0 2023-10-24 [2] Bioconductor
## fANCOVA 0.6-1 2020-11-13 [2] CRAN (R 4.3.1)
## fansi 1.0.5 2023-10-08 [2] CRAN (R 4.3.1)
## FANTOM3and4CAGE 1.37.0 2023-10-24 [2] Bioconductor
## farms 1.54.0 2023-10-24 [2] Bioconductor
## farver 2.1.1 2022-07-06 [2] CRAN (R 4.3.1)
## fastcluster 1.2.3 2021-05-24 [2] CRAN (R 4.3.1)
## fastDummies 1.7.3 2023-07-06 [2] CRAN (R 4.3.1)
## fastICA 1.2-3 2021-09-25 [2] CRAN (R 4.3.1)
## fastLiquidAssociation 1.38.0 2023-10-24 [2] Bioconductor
## fastmap 1.1.1 2023-02-24 [2] CRAN (R 4.3.1)
## fastmatch 1.1-4 2023-08-18 [2] CRAN (R 4.3.1)
## FastqCleaner 1.20.0 2023-10-24 [2] Bioconductor
## fastqcr 0.1.3 2023-02-18 [2] CRAN (R 4.3.1)
## fastreeR 1.6.0 2023-10-24 [2] Bioconductor
## fastseg 1.48.0 2023-10-24 [2] Bioconductor
## fauxpas 0.5.2 2023-05-03 [2] CRAN (R 4.3.1)
## fBasics 4031.95 2023-10-08 [2] CRAN (R 4.3.1)
## FCBF 2.10.0 2023-10-24 [2] Bioconductor
## fCCAC 1.28.0 2023-10-24 [2] Bioconductor
## fCI 1.32.0 2023-10-24 [2] Bioconductor
## fcoex 1.16.0 2023-10-24 [2] Bioconductor
## FCPS 1.3.4 2023-10-19 [2] CRAN (R 4.3.1)
## fcScan 1.16.0 2023-10-24 [2] Bioconductor
## fda 6.1.4 2023-05-23 [2] CRAN (R 4.3.1)
## fda.usc 2.1.0 2022-10-17 [2] CRAN (R 4.3.1)
## FDb.InfiniumMethylation.hg18 2.2.0 2023-06-20 [2] Bioconductor
## FDb.InfiniumMethylation.hg19 2.2.0 2023-06-20 [2] Bioconductor
## FDb.UCSC.tRNAs 1.0.1 2023-06-20 [2] Bioconductor
## fdrame 1.74.0 2023-10-24 [2] Bioconductor
## fdrtool 1.2.17 2021-11-13 [2] CRAN (R 4.3.1)
## fds 1.8 2018-10-31 [2] CRAN (R 4.3.1)
## FEAST 1.10.0 2023-10-24 [2] Bioconductor
## FeatSeekR 1.2.0 2023-10-24 [2] Bioconductor
## feature 1.2.15 2021-02-10 [2] CRAN (R 4.3.1)
## fedup 1.10.0 2023-10-24 [2] Bioconductor
## FELLA 1.22.0 2023-10-24 [2] Bioconductor
## fenr 1.0.0 2023-10-24 [2] Bioconductor
## ff 4.0.9 2023-01-25 [2] CRAN (R 4.3.1)
## ffpe 1.46.0 2023-10-24 [2] Bioconductor
## ffpeExampleData 1.39.0 2023-10-24 [2] Bioconductor
## fftw 1.0-7 2022-03-10 [2] CRAN (R 4.3.1)
## fftwtools 0.9-11 2021-03-01 [2] CRAN (R 4.3.1)
## fGarch 4031.90 2023-10-15 [2] CRAN (R 4.3.1)
## fgga 1.10.0 2023-10-24 [2] Bioconductor
## FGNet 3.36.0 2023-10-24 [2] Bioconductor
## fgsea 1.28.0 2023-10-24 [2] Bioconductor
## fibroEset 1.43.0 2023-10-24 [2] Bioconductor
## FieldEffectCrc 1.11.0 2023-10-24 [2] Bioconductor
## fields 15.2 2023-08-17 [2] CRAN (R 4.3.1)
## filehash 2.4-5 2023-02-09 [2] CRAN (R 4.3.1)
## filelock 1.0.2 2018-10-05 [2] CRAN (R 4.3.1)
## filematrix 1.3 2018-02-27 [2] CRAN (R 4.3.1)
## filesstrings 3.2.4 2023-01-25 [2] CRAN (R 4.3.1)
## FilterFFPE 1.12.0 2023-10-24 [2] Bioconductor
## FindIT2 1.8.0 2023-10-24 [2] Bioconductor
## findpython 1.0.8 2023-03-14 [2] CRAN (R 4.3.1)
## fingerprint 3.5.7 2018-01-07 [2] CRAN (R 4.3.1)
## FIs 1.29.0 2023-10-24 [2] Bioconductor
## FISHalyseR 1.36.0 2023-10-24 [2] Bioconductor
## fishpond 2.8.0 2023-10-24 [2] Bioconductor
## fission 1.21.0 2023-10-24 [2] Bioconductor
## fit.models 0.64 2020-08-02 [2] CRAN (R 4.3.1)
## fitdistrplus 1.1-11 2023-04-25 [2] CRAN (R 4.3.1)
## FitHiC 1.28.0 2023-10-24 [2] Bioconductor
## flagme 1.58.0 2023-10-24 [2] Bioconductor
## FLAMES 1.8.0 2023-10-24 [2] Bioconductor
## flashClust 1.01-2 2012-08-21 [2] CRAN (R 4.3.1)
## flatxml 0.1.1 2020-12-01 [2] CRAN (R 4.3.1)
## Fletcher2013a 1.37.0 2023-10-24 [2] Bioconductor
## Fletcher2013b 1.37.0 2023-10-24 [2] Bioconductor
## flexclust 1.4-1 2022-04-08 [2] CRAN (R 4.3.1)
## flexdashboard 0.6.2 2023-08-11 [2] CRAN (R 4.3.1)
## flexmix 2.3-19 2023-03-16 [2] CRAN (R 4.3.1)
## flextable 0.9.4 2023-10-22 [2] CRAN (R 4.3.1)
## float 0.3-1 2023-02-16 [2] CRAN (R 4.3.1)
## flock 0.7 2016-11-12 [2] CRAN (R 4.3.1)
## flowAI 1.32.0 2023-10-24 [2] Bioconductor
## flowBeads 1.40.0 2023-10-24 [2] Bioconductor
## flowBin 1.38.0 2023-10-24 [2] Bioconductor
## flowcatchR 1.36.0 2023-10-24 [2] Bioconductor
## flowCHIC 1.36.0 2023-10-24 [2] Bioconductor
## flowClean 1.40.0 2023-10-24 [2] Bioconductor
## flowClust 3.40.0 2023-10-24 [2] Bioconductor
## flowCore 2.14.0 2023-10-24 [2] Bioconductor
## flowCut 1.12.0 2023-10-24 [2] Bioconductor
## flowCyBar 1.38.0 2023-10-24 [2] Bioconductor
## flowDensity 1.36.0 2023-10-24 [2] Bioconductor
## flowFP 1.60.0 2023-10-24 [2] Bioconductor
## flowGate 1.2.0 2023-10-24 [2] Bioconductor
## flowGraph 1.10.0 2023-10-24 [2] Bioconductor
## flowMap 1.40.0 2023-10-24 [2] Bioconductor
## flowMatch 1.38.0 2023-10-24 [2] Bioconductor
## flowMeans 1.62.0 2023-10-24 [2] Bioconductor
## flowMerge 2.50.0 2023-10-24 [2] Bioconductor
## flowPeaks 1.48.0 2023-10-24 [2] Bioconductor
## flowPloidy 1.28.0 2023-10-24 [2] Bioconductor
## flowPloidyData 1.27.0 2023-10-24 [2] Bioconductor
## flowPlots 1.50.0 2023-10-24 [2] Bioconductor
## FlowSOM 2.10.0 2023-10-24 [2] Bioconductor
## FlowSorted.Blood.450k 1.39.0 2023-10-24 [2] Bioconductor
## FlowSorted.Blood.EPIC 2.5.2 2023-10-24 [2] Bioconductor
## FlowSorted.CordBlood.450k 1.29.0 2023-10-24 [2] Bioconductor
## FlowSorted.CordBloodCombined.450k 1.17.0 2023-10-24 [2] Bioconductor
## FlowSorted.CordBloodNorway.450k 1.27.0 2023-10-24 [2] Bioconductor
## FlowSorted.DLPFC.450k 1.37.0 2023-10-24 [2] Bioconductor
## flowSpecs 1.16.0 2023-10-24 [2] Bioconductor
## flowStats 4.14.0 2023-10-24 [2] Bioconductor
## flowTime 1.26.0 2023-10-24 [2] Bioconductor
## flowTrans 1.54.0 2023-10-24 [2] Bioconductor
## flowViz 1.66.0 2023-10-24 [2] Bioconductor
## flowVS 1.34.0 2023-10-24 [2] Bioconductor
## flowWorkspace 4.14.0 2023-10-24 [2] Bioconductor
## flowWorkspaceData 3.13.0 2023-10-24 [2] Bioconductor
## fluentGenomics 1.15.0 2023-10-24 [2] Bioconductor
## fmcsR 1.44.0 2023-10-24 [2] Bioconductor
## FME 1.3.6.3 2023-07-05 [2] CRAN (R 4.3.1)
## fmrs 1.12.0 2023-10-24 [2] Bioconductor
## fmsb 0.7.5 2023-01-05 [2] CRAN (R 4.3.1)
## FMStable 0.1-4 2022-06-06 [2] CRAN (R 4.3.1)
## FNN 1.1.3.2 2023-03-20 [2] CRAN (R 4.3.1)
## fobitools 1.10.0 2023-10-24 [2] Bioconductor
## FoldGO 1.20.0 2023-10-24 [2] Bioconductor
## fontawesome 0.5.2 2023-08-19 [2] CRAN (R 4.3.1)
## fontBitstreamVera 0.1.1 2017-02-01 [2] CRAN (R 4.3.1)
## fontLiberation 0.1.0 2016-10-15 [2] CRAN (R 4.3.1)
## fontquiver 0.2.1 2017-02-01 [2] CRAN (R 4.3.1)
## forcats 1.0.0 2023-01-29 [2] CRAN (R 4.3.1)
## foreach 1.5.2 2022-02-02 [2] CRAN (R 4.3.1)
## forecast 8.21.1 2023-08-31 [2] CRAN (R 4.3.1)
## foreign 0.8-85 2023-09-09 [3] CRAN (R 4.3.1)
## forestplot 3.1.3 2023-08-26 [2] CRAN (R 4.3.1)
## formatR 1.14 2023-01-17 [2] CRAN (R 4.3.1)
## formattable 0.2.1 2021-01-07 [2] CRAN (R 4.3.1)
## Formula 1.2-5 2023-02-24 [2] CRAN (R 4.3.1)
## formula.tools 1.7.1 2018-03-01 [2] CRAN (R 4.3.1)
## fourDNData 1.1.0 2023-10-24 [2] Bioconductor
## fpc 2.2-10 2023-01-07 [2] CRAN (R 4.3.1)
## fracdiff 1.5-2 2022-10-31 [2] CRAN (R 4.3.1)
## FRASER 1.14.0 2023-10-24 [2] Bioconductor
## frenchFISH 1.14.0 2023-10-24 [2] Bioconductor
## FreqProf 0.0.1 2016-01-21 [2] CRAN (R 4.3.1)
## fresh 0.2.0 2020-05-29 [2] CRAN (R 4.3.1)
## FRGEpistasis 1.38.0 2023-10-24 [2] Bioconductor
## frma 1.54.0 2023-10-24 [2] Bioconductor
## frmaExampleData 1.37.0 2023-10-24 [2] Bioconductor
## frmaTools 1.54.0 2023-10-24 [2] Bioconductor
## fs 1.6.3 2023-07-20 [2] CRAN (R 4.3.1)
## FScanR 1.12.0 2023-10-24 [2] Bioconductor
## FSelector 0.34 2023-08-22 [2] CRAN (R 4.3.1)
## fst 0.9.8 2022-02-08 [2] CRAN (R 4.3.1)
## fstcore 0.9.14 2023-01-12 [2] CRAN (R 4.3.1)
## FunChIP 1.28.0 2023-10-24 [2] Bioconductor
## functional 0.6 2014-07-16 [2] CRAN (R 4.3.1)
## funtooNorm 1.26.0 2023-10-24 [2] Bioconductor
## furrowSeg 1.29.0 2023-10-24 [2] Bioconductor
## furrr 0.3.1 2022-08-15 [2] CRAN (R 4.3.1)
## FuseSOM 1.4.0 2023-10-24 [2] Bioconductor
## futile.logger 1.4.3 2016-07-10 [2] CRAN (R 4.3.1)
## futile.options 1.0.1 2018-04-20 [2] CRAN (R 4.3.1)
## future 1.33.0 2023-07-01 [2] CRAN (R 4.3.1)
## future.apply 1.11.0 2023-05-21 [2] CRAN (R 4.3.1)
## fuzzyjoin 0.1.6 2020-05-15 [2] CRAN (R 4.3.1)
## GA 3.2.3 2022-10-18 [2] CRAN (R 4.3.1)
## GA4GHclient 1.26.0 2023-10-24 [2] Bioconductor
## GA4GHshiny 1.24.0 2023-10-24 [2] Bioconductor
## gaga 2.48.0 2023-10-24 [2] Bioconductor
## gage 2.52.0 2023-10-24 [2] Bioconductor
## gageData 2.39.0 2023-10-24 [2] Bioconductor
## gaggle 1.70.0 2023-10-24 [2] Bioconductor
## gam 1.22-2 2023-03-28 [2] CRAN (R 4.3.1)
## gamlss 5.4-20 2023-10-04 [2] CRAN (R 4.3.1)
## gamlss.data 6.0-2 2021-11-07 [2] CRAN (R 4.3.1)
## gamlss.dist 6.1-1 2023-08-23 [2] CRAN (R 4.3.1)
## gap 1.5-3 2023-08-26 [2] CRAN (R 4.3.1)
## gap.datasets 0.0.6 2023-08-25 [2] CRAN (R 4.3.1)
## GAprediction 1.28.0 2023-10-24 [2] Bioconductor
## garfield 1.30.0 2023-10-24 [2] Bioconductor
## gargle 1.5.2 2023-07-20 [2] CRAN (R 4.3.1)
## GARS 1.22.0 2023-10-24 [2] Bioconductor
## gaschYHS 1.39.0 2023-10-24 [2] Bioconductor
## GateFinder 1.22.0 2023-10-24 [2] Bioconductor
## gatom 1.0.0 2023-10-24 [2] Bioconductor
## gbm 2.1.8.1 2022-08-11 [2] CRAN (R 4.3.1)
## GBScleanR 1.6.0 2023-10-24 [2] Bioconductor
## gbutils 0.5 2022-05-27 [2] CRAN (R 4.3.1)
## gcapc 1.26.0 2023-10-24 [2] Bioconductor
## gcatest 2.2.0 2023-10-24 [2] Bioconductor
## gclus 1.3.2 2019-01-07 [2] CRAN (R 4.3.1)
## gCrisprTools 2.8.0 2023-10-24 [2] Bioconductor
## gcrma 2.74.0 2023-10-24 [2] Bioconductor
## gcspikelite 1.39.0 2023-10-24 [2] Bioconductor
## GCSscore 1.16.0 2023-10-24 [2] Bioconductor
## gdata 3.0.0 2023-10-16 [2] CRAN (R 4.3.1)
## GDCRNATools 1.22.0 2023-10-24 [2] Bioconductor
## gDNAinRNAseqData 1.1.0 2023-10-24 [2] Bioconductor
## gDNAx 1.0.0 2023-10-24 [2] Bioconductor
## gDR 1.0.0 2023-10-24 [2] Bioconductor
## gDRcore 1.0.0 2023-10-24 [2] Bioconductor
## gDRimport 1.0.0 2023-10-24 [2] Bioconductor
## gDRstyle 1.0.0 2023-10-24 [2] Bioconductor
## gDRtestData 0.99.21 2023-10-24 [2] Bioconductor
## gDRutils 1.0.0 2023-10-24 [2] Bioconductor
## GDSArray 1.22.0 2023-10-24 [2] Bioconductor
## gdsfmt 1.38.0 2023-10-24 [2] Bioconductor
## gdtools 0.3.4 2023-10-15 [2] CRAN (R 4.3.1)
## geeM 0.10.1 2018-06-18 [2] CRAN (R 4.3.1)
## geepack 1.3.9 2022-08-16 [2] CRAN (R 4.3.1)
## geigen 2.3 2019-05-30 [2] CRAN (R 4.3.1)
## geiger 2.0.11 2023-04-03 [2] CRAN (R 4.3.1)
## GEM 1.28.0 2023-10-24 [2] Bioconductor
## gemini 1.16.0 2023-10-24 [2] Bioconductor
## gemma.R 2.0.0 2023-10-24 [2] Bioconductor
## genalg 0.2.1 2022-04-04 [2] CRAN (R 4.3.1)
## genArise 1.78.0 2023-10-24 [2] Bioconductor
## genbankr 1.30.0 2023-10-24 [2] Bioconductor
## geneAttribution 1.28.0 2023-10-24 [2] Bioconductor
## GeneBreak 1.32.0 2023-10-24 [2] Bioconductor
## geneClassifiers 1.26.0 2023-10-24 [2] Bioconductor
## geneExpressionFromGEO 0.9 2021-12-16 [2] CRAN (R 4.3.1)
## GeneExpressionSignature 1.48.0 2023-10-24 [2] Bioconductor
## genefilter 1.84.0 2023-10-24 [2] Bioconductor
## genefu 2.34.0 2023-10-24 [2] Bioconductor
## GeneGA 1.52.0 2023-10-24 [2] Bioconductor
## GeneGeneInteR 1.28.0 2023-10-24 [2] Bioconductor
## geneLenDataBase 1.37.0 2023-10-24 [2] Bioconductor
## GeneMeta 1.74.0 2023-10-24 [2] Bioconductor
## GeneNet 1.2.16 2021-11-14 [2] CRAN (R 4.3.1)
## GeneNetworkBuilder 1.44.0 2023-10-24 [2] Bioconductor
## GeneOverlap 1.38.0 2023-10-24 [2] Bioconductor
## geneplast 1.28.0 2023-10-24 [2] Bioconductor
## geneplast.data 0.99.7 2023-10-25 [2] Bioconductor
## geneplast.data.string.v91 0.99.6 2023-06-20 [2] Bioconductor
## geneplotter 1.80.0 2023-10-24 [2] Bioconductor
## geneRecommender 1.74.0 2023-10-24 [2] Bioconductor
## GeneRegionScan 1.58.0 2023-10-24 [2] Bioconductor
## generegulation 1.27.0 2023-10-24 [2] Bioconductor
## generics 0.1.3 2022-07-05 [2] CRAN (R 4.3.1)
## geneRxCluster 1.38.0 2023-10-24 [2] Bioconductor
## GeneSelectMMD 2.46.0 2023-10-24 [2] Bioconductor
## GENESIS 2.32.0 2023-10-24 [2] Bioconductor
## GeneStructureTools 1.22.0 2023-10-24 [2] Bioconductor
## GeneSummary 0.99.6 2023-10-25 [2] Bioconductor
## geNetClassifier 1.42.0 2023-10-24 [2] Bioconductor
## genetics 1.3.8.1.3 2021-03-01 [2] CRAN (R 4.3.1)
## GeneticsPed 1.64.0 2023-10-24 [2] Bioconductor
## GeneTonic 2.6.0 2023-10-24 [2] Bioconductor
## geneXtendeR 1.28.0 2023-10-24 [2] Bioconductor
## GENIE3 1.24.0 2023-10-24 [2] Bioconductor
## genieclust 1.1.5-2 2023-10-18 [2] CRAN (R 4.3.1)
## genio 1.1.2 2023-01-06 [2] CRAN (R 4.3.1)
## genlasso 1.6.1 2022-08-22 [2] CRAN (R 4.3.1)
## GENLIB 1.1.9 2023-01-17 [2] CRAN (R 4.3.1)
## genoCN 1.54.0 2023-10-24 [2] Bioconductor
## genomation 1.34.0 2023-10-24 [2] Bioconductor
## genomationData 1.33.0 2023-10-24 [2] Bioconductor
## GenomAutomorphism 1.4.0 2023-10-24 [2] Bioconductor
## GenomeInfoDb 1.38.0 2023-10-24 [2] Bioconductor
## GenomeInfoDbData 1.2.11 2023-10-17 [2] Bioconductor
## genomeIntervals 1.58.0 2023-10-24 [2] Bioconductor
## genomes 3.32.0 2023-10-24 [2] Bioconductor
## genomewidesnp5Crlmm 1.0.6 2023-06-20 [2] local
## genomewidesnp6Crlmm 1.0.7 2023-06-20 [2] Bioconductor
## GenomicAlignments 1.38.0 2023-10-24 [2] Bioconductor
## GenomicDataCommons 1.26.0 2023-10-24 [2] Bioconductor
## GenomicDistributions 1.10.0 2023-10-24 [2] Bioconductor
## GenomicDistributionsData 1.9.0 2023-10-24 [2] Bioconductor
## GenomicFeatures 1.54.0 2023-10-24 [2] Bioconductor
## GenomicFiles 1.38.0 2023-10-24 [2] Bioconductor
## genomicInstability 1.8.0 2023-10-24 [2] Bioconductor
## GenomicInteractionNodes 1.6.0 2023-10-24 [2] Bioconductor
## GenomicInteractions 1.36.0 2023-10-24 [2] Bioconductor
## GenomicOZone 1.16.0 2023-10-24 [2] Bioconductor
## GenomicPlot 1.0.0 2023-10-24 [2] Bioconductor
## GenomicRanges 1.54.0 2023-10-24 [2] Bioconductor
## GenomicScores 2.14.0 2023-10-24 [2] Bioconductor
## GenomicState 0.99.15 2023-10-25 [2] Bioconductor
## GenomicSuperSignature 1.10.0 2023-10-24 [2] Bioconductor
## GenomicTools.fileHandler 0.1.5.9 2020-03-05 [2] CRAN (R 4.3.1)
## GenomicTuples 1.36.0 2023-10-24 [2] Bioconductor
## GenProSeq 1.6.0 2023-10-24 [2] Bioconductor
## GenSA 1.1.10.1 2023-09-19 [2] CRAN (R 4.3.1)
## GenVisR 1.34.0 2023-10-24 [2] Bioconductor
## GeoDiff 1.8.0 2023-10-24 [2] Bioconductor
## GEOexplorer 1.8.0 2023-10-24 [2] Bioconductor
## GEOfastq 1.10.0 2023-10-24 [2] Bioconductor
## GEOmap 2.5-5 2023-09-01 [2] CRAN (R 4.3.1)
## GEOmetadb 1.64.0 2023-10-24 [2] Bioconductor
## geometry 0.4.7 2023-02-03 [2] CRAN (R 4.3.1)
## GeomxTools 3.6.0 2023-10-24 [2] Bioconductor
## GeoMxWorkflows 1.9.0 2023-10-24 [2] Bioconductor
## GEOquery 2.70.0 2023-10-24 [2] Bioconductor
## geosphere 1.5-18 2022-11-15 [2] CRAN (R 4.3.1)
## GEOsubmission 1.54.0 2023-10-24 [2] Bioconductor
## GeoTcgaData 2.2.0 2023-10-24 [2] Bioconductor
## gep2pep 1.22.0 2023-10-24 [2] Bioconductor
## gert 2.0.0 2023-09-26 [2] CRAN (R 4.3.1)
## gespeR 1.34.0 2023-10-24 [2] Bioconductor
## getDEE2 1.12.0 2023-10-24 [2] Bioconductor
## getopt 1.20.4 2023-10-01 [2] CRAN (R 4.3.1)
## GetoptLong 1.0.5 2020-12-15 [2] CRAN (R 4.3.1)
## getPass 0.2-2 2017-07-21 [2] CRAN (R 4.3.1)
## GeuvadisTranscriptExpr 1.29.0 2023-10-24 [2] Bioconductor
## geva 1.10.0 2023-10-24 [2] Bioconductor
## GEWIST 1.46.0 2023-10-24 [2] Bioconductor
## GFA 1.0.5 2023-10-21 [2] CRAN (R 4.3.1)
## gfonts 0.2.0 2023-01-08 [2] CRAN (R 4.3.1)
## gg4way 1.0.0 2023-10-24 [2] Bioconductor
## ggalluvial 0.12.5 2023-02-22 [2] CRAN (R 4.3.1)
## GGally 2.1.2 2021-06-21 [2] CRAN (R 4.3.1)
## ggalt 0.4.0 2017-02-15 [2] CRAN (R 4.3.1)
## gganimate 1.0.8 2022-09-08 [2] CRAN (R 4.3.1)
## ggbeeswarm 0.7.2 2023-04-29 [2] CRAN (R 4.3.1)
## ggbio 1.50.0 2023-10-24 [2] Bioconductor
## ggbump 0.1.0 2020-04-24 [2] CRAN (R 4.3.1)
## ggcorrplot 0.1.4.1 2023-09-05 [2] CRAN (R 4.3.1)
## ggcyto 1.30.0 2023-10-24 [2] Bioconductor
## ggdendro 0.1.23 2022-02-16 [2] CRAN (R 4.3.1)
## ggdist 3.3.0 2023-05-13 [2] CRAN (R 4.3.1)
## ggExtra 0.10.1 2023-08-21 [2] CRAN (R 4.3.1)
## ggfittext 0.10.1 2023-09-05 [2] CRAN (R 4.3.1)
## ggforce 0.4.1 2022-10-04 [2] CRAN (R 4.3.1)
## ggformula 0.10.4 2023-04-11 [2] CRAN (R 4.3.1)
## ggfortify 0.4.16 2023-03-20 [2] CRAN (R 4.3.1)
## ggfun 0.1.3 2023-09-15 [2] CRAN (R 4.3.1)
## gggenes 0.5.1 2023-09-05 [2] CRAN (R 4.3.1)
## ggh4x 0.2.6 2023-08-30 [2] CRAN (R 4.3.1)
## gghalves 0.1.4 2022-11-20 [2] CRAN (R 4.3.1)
## gghighlight 0.4.0 2022-10-16 [2] CRAN (R 4.3.1)
## ggimage 0.3.3 2023-06-19 [2] CRAN (R 4.3.1)
## gginnards 0.1.2 2023-05-24 [2] CRAN (R 4.3.1)
## ggiraph 0.8.7 2023-03-17 [2] CRAN (R 4.3.1)
## ggkegg 1.0.0 2023-10-24 [2] Bioconductor
## ggm 2.5 2020-02-16 [2] CRAN (R 4.3.1)
## ggmanh 1.6.0 2023-10-24 [2] Bioconductor
## ggmcmc 1.5.1.1 2021-02-10 [2] CRAN (R 4.3.1)
## ggmsa 1.8.0 2023-10-24 [2] Bioconductor
## ggnetwork 0.5.12 2023-03-06 [2] CRAN (R 4.3.1)
## ggnewscale 0.4.9 2023-05-25 [2] CRAN (R 4.3.1)
## GGPA 1.14.0 2023-10-24 [2] Bioconductor
## ggpattern 1.0.1 2022-11-09 [2] CRAN (R 4.3.1)
## ggplot.multistats 1.0.0 2019-10-28 [2] CRAN (R 4.3.1)
## ggplot2 3.4.4 2023-10-12 [2] CRAN (R 4.3.1)
## ggplotify 0.1.2 2023-08-09 [2] CRAN (R 4.3.1)
## ggpmisc 0.5.4-1 2023-08-13 [2] CRAN (R 4.3.1)
## ggpointdensity 0.1.0 2019-08-28 [2] CRAN (R 4.3.1)
## ggpp 0.5.4 2023-08-12 [2] CRAN (R 4.3.1)
## ggprism 1.0.4 2022-11-04 [2] CRAN (R 4.3.1)
## ggpubr 0.6.0 2023-02-10 [2] CRAN (R 4.3.1)
## ggraph 2.1.0 2022-10-09 [2] CRAN (R 4.3.1)
## ggrastr 1.0.2 2023-06-01 [2] CRAN (R 4.3.1)
## ggrepel 0.9.4 2023-10-13 [2] CRAN (R 4.3.1)
## ggridges 0.5.4 2022-09-26 [2] CRAN (R 4.3.1)
## ggsc 1.0.0 2023-10-24 [2] Bioconductor
## ggsci 3.0.0 2023-03-08 [2] CRAN (R 4.3.1)
## ggseqlogo 0.1 2017-07-25 [2] CRAN (R 4.3.1)
## ggside 0.2.2 2022-12-04 [2] CRAN (R 4.3.1)
## ggsignif 0.6.4 2022-10-13 [2] CRAN (R 4.3.1)
## ggspavis 1.8.0 2023-10-24 [2] Bioconductor
## ggstance 0.3.6 2022-11-16 [2] CRAN (R 4.3.1)
## ggstar 1.0.4 2022-11-08 [2] CRAN (R 4.3.1)
## ggsurvfit 0.3.1 2023-08-28 [2] CRAN (R 4.3.1)
## ggtern 3.4.2 2023-06-06 [2] CRAN (R 4.3.1)
## ggtext 0.1.2 2022-09-16 [2] CRAN (R 4.3.1)
## ggthemes 4.2.4 2021-01-20 [2] CRAN (R 4.3.1)
## ggtree 3.10.0 2023-10-24 [2] Bioconductor
## ggtreeDendro 1.4.0 2023-10-24 [2] Bioconductor
## ggtreeExtra 1.12.0 2023-10-24 [2] Bioconductor
## ggupset 0.3.0 2020-05-05 [2] CRAN (R 4.3.1)
## ggvenn 0.1.10 2023-03-31 [2] CRAN (R 4.3.1)
## ggVennDiagram 1.2.3 2023-08-14 [2] CRAN (R 4.3.1)
## ggvis 0.4.8 2023-03-08 [2] CRAN (R 4.3.1)
## ggwordcloud 0.6.0 2023-10-18 [2] CRAN (R 4.3.1)
## gh 1.4.0 2023-02-22 [2] CRAN (R 4.3.1)
## GIGSEA 1.20.0 2023-10-24 [2] Bioconductor
## GIGSEAdata 1.19.0 2023-10-24 [2] Bioconductor
## girafe 1.54.0 2023-10-24 [2] Bioconductor
## GISPA 1.26.0 2023-10-24 [2] Bioconductor
## gistr 0.9.0 2020-07-29 [2] CRAN (R 4.3.1)
## git2r 0.32.0 2023-04-12 [2] CRAN (R 4.3.1)
## gitcreds 0.1.2 2022-09-08 [2] CRAN (R 4.3.1)
## GLAD 2.66.0 2023-10-24 [2] Bioconductor
## GladiaTOX 1.18.0 2023-10-24 [2] Bioconductor
## glasso 1.11 2019-10-01 [2] CRAN (R 4.3.1)
## gld 2.6.6 2022-10-23 [2] CRAN (R 4.3.1)
## Glimma 2.12.0 2023-10-24 [2] Bioconductor
## glm2 1.2.1 2018-08-11 [2] CRAN (R 4.3.1)
## glmGamPoi 1.14.0 2023-10-24 [2] Bioconductor
## glmmSeq 0.5.5 2022-10-08 [2] CRAN (R 4.3.1)
## glmmTMB 1.1.8 2023-10-07 [2] CRAN (R 4.3.1)
## glmnet 4.1-8 2023-08-22 [2] CRAN (R 4.3.1)
## glmnetUtils 1.1.9 2023-09-10 [2] CRAN (R 4.3.1)
## glmpca 0.2.0 2020-07-18 [2] CRAN (R 4.3.1)
## glmSparseNet 1.20.0 2023-10-24 [2] Bioconductor
## GlobalAncova 4.20.0 2023-10-24 [2] Bioconductor
## GlobalOptions 0.1.2 2020-06-10 [2] CRAN (R 4.3.1)
## globals 0.16.2 2022-11-21 [2] CRAN (R 4.3.1)
## globalSeq 1.30.0 2023-10-24 [2] Bioconductor
## globaltest 5.56.0 2023-10-24 [2] Bioconductor
## GloScope 1.0.0 2023-10-24 [2] Bioconductor
## glue 1.6.2 2022-02-24 [2] CRAN (R 4.3.1)
## gmapR 1.44.0 2023-10-24 [2] Bioconductor
## GmicR 1.16.0 2023-10-24 [2] Bioconductor
## gmm 1.8 2023-06-06 [2] CRAN (R 4.3.1)
## gmodels 2.18.1.1 2022-05-17 [2] CRAN (R 4.3.1)
## gmoviz 1.14.0 2023-10-24 [2] Bioconductor
## gmp 0.7-2 2023-07-01 [2] CRAN (R 4.3.1)
## GMRP 1.30.0 2023-10-24 [2] Bioconductor
## GNET2 1.18.0 2023-10-24 [2] Bioconductor
## gnm 1.1-5 2023-09-16 [2] CRAN (R 4.3.1)
## GNOSIS 1.0.0 2023-10-24 [2] Bioconductor
## GO.db 3.18.0 2023-09-21 [2] Bioconductor
## GOexpress 1.36.0 2023-10-24 [2] Bioconductor
## GoFKernel 2.1-1 2018-05-26 [2] CRAN (R 4.3.1)
## goftest 1.2-3 2021-10-07 [2] CRAN (R 4.3.1)
## GOfuncR 1.22.0 2023-10-24 [2] Bioconductor
## golem 0.4.1 2023-06-05 [2] CRAN (R 4.3.1)
## golubEsets 1.43.0 2023-10-24 [2] Bioconductor
## googleAuthR 2.0.1 2023-04-11 [2] CRAN (R 4.3.1)
## googledrive 2.1.1 2023-06-11 [2] CRAN (R 4.3.1)
## googlesheets4 1.1.1 2023-06-11 [2] CRAN (R 4.3.1)
## googleVis 0.7.1 2023-03-01 [2] CRAN (R 4.3.1)
## GOpro 1.28.0 2023-10-24 [2] Bioconductor
## goProfiles 1.64.0 2023-10-24 [2] Bioconductor
## GOSemSim 2.28.0 2023-10-24 [2] Bioconductor
## goseq 1.54.0 2023-10-24 [2] Bioconductor
## GOSim 1.40.0 2023-10-24 [2] Bioconductor
## goSorensen 1.4.0 2023-10-24 [2] Bioconductor
## goSTAG 1.26.0 2023-10-24 [2] Bioconductor
## GOstats 2.68.0 2023-10-24 [2] Bioconductor
## GOsummaries 2.38.0 2023-10-24 [2] Bioconductor
## GOTHiC 1.38.0 2023-10-24 [2] Bioconductor
## goTools 1.76.0 2023-10-24 [2] Bioconductor
## gower 1.0.1 2022-12-22 [2] CRAN (R 4.3.1)
## GPA 1.14.0 2023-10-24 [2] Bioconductor
## gpaExample 1.13.0 2023-10-24 [2] Bioconductor
## gplots 3.1.3 2022-04-25 [2] CRAN (R 4.3.1)
## gpls 1.74.0 2023-10-24 [2] Bioconductor
## gProfileR 0.7.0 2019-11-04 [2] CRAN (R 4.3.1)
## gprofiler2 0.2.2 2023-06-14 [2] CRAN (R 4.3.1)
## gpuMagic 1.18.0 2023-10-24 [2] Bioconductor
## gRain 1.3.14 2023-08-12 [2] CRAN (R 4.3.1)
## GRaNIE 1.6.0 2023-10-24 [2] Bioconductor
## granulator 1.10.0 2023-10-24 [2] Bioconductor
## graper 1.18.0 2023-10-24 [2] Bioconductor
## graph 1.80.0 2023-10-24 [2] Bioconductor
## GraphAlignment 1.66.0 2023-10-24 [2] Bioconductor
## GraphAT 1.74.0 2023-10-24 [2] Bioconductor
## graphics * 4.3.1 2023-06-20 [3] local
## graphite 1.48.0 2023-10-24 [2] Bioconductor
## graphlayouts 1.0.1 2023-09-19 [2] CRAN (R 4.3.1)
## GraphPAC 1.44.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## grasp2db 1.1.0 2023-06-20 [2] local
## gRbase 2.0.0 2023-09-22 [2] CRAN (R 4.3.1)
## grDevices * 4.3.1 2023-06-20 [3] local
## GRENITS 1.54.0 2023-10-24 [2] Bioconductor
## GreyListChIP 1.34.0 2023-10-24 [2] Bioconductor
## grid 4.3.1 2023-06-20 [3] local
## gridBase 0.4-7 2014-02-24 [2] CRAN (R 4.3.1)
## gridExtra 2.3 2017-09-09 [2] CRAN (R 4.3.1)
## gridGraphics 0.5-1 2020-12-13 [2] CRAN (R 4.3.1)
## gridpattern 1.1.0 2023-10-03 [2] CRAN (R 4.3.1)
## gridSVG 1.7-5 2023-03-09 [2] CRAN (R 4.3.1)
## gridtext 0.1.5 2022-09-16 [2] CRAN (R 4.3.1)
## grImport 0.9-7 2023-03-09 [2] CRAN (R 4.3.1)
## grImport2 0.3-0 2023-10-09 [2] CRAN (R 4.3.1)
## GRmetrics 1.28.0 2023-10-24 [2] Bioconductor
## grndata 1.33.0 2023-10-24 [2] Bioconductor
## groHMM 1.36.0 2023-10-24 [2] Bioconductor
## groupdata2 2.0.3 2023-06-18 [2] CRAN (R 4.3.1)
## grr 0.9.5 2016-08-26 [2] CRAN (R 4.3.1)
## GRridge 1.26.0 2023-10-24 [2] Bioconductor
## GSA 1.03.2 2022-03-19 [2] CRAN (R 4.3.1)
## GSALightning 1.30.0 2023-10-24 [2] Bioconductor
## GSAR 1.36.0 2023-10-24 [2] Bioconductor
## GSBenchMark 1.21.0 2023-10-24 [2] Bioconductor
## GSCA 2.32.0 2023-10-24 [2] Bioconductor
## gscreend 1.16.0 2023-10-24 [2] Bioconductor
## GSE103322 1.7.0 2023-10-24 [2] Bioconductor
## GSE13015 1.9.0 2023-10-24 [2] Bioconductor
## GSE159526 1.7.0 2023-10-24 [2] Bioconductor
## GSE62944 1.29.1 2023-10-24 [2] Bioconductor
## GSEABase 1.64.0 2023-10-24 [2] Bioconductor
## GSEABenchmarkeR 1.22.0 2023-10-24 [2] Bioconductor
## GSEAlm 1.62.0 2023-10-24 [2] Bioconductor
## GSEAmining 1.12.0 2023-10-24 [2] Bioconductor
## gsean 1.22.0 2023-10-24 [2] Bioconductor
## GSgalgoR 1.12.0 2023-10-24 [2] Bioconductor
## gsl 2.1-8 2023-01-24 [2] CRAN (R 4.3.1)
## gsmoothr 0.1.7 2014-06-10 [2] CRAN (R 4.3.1)
## gson 0.1.0 2023-03-07 [2] CRAN (R 4.3.1)
## GSReg 1.36.0 2023-10-24 [2] Bioconductor
## GSRI 2.50.0 2023-10-24 [2] Bioconductor
## gss 2.2-7 2023-08-16 [2] CRAN (R 4.3.1)
## gstat 2.1-1 2023-04-06 [2] CRAN (R 4.3.1)
## gsubfn 0.7 2018-03-16 [2] CRAN (R 4.3.1)
## GSVA 1.50.0 2023-10-24 [2] Bioconductor
## GSVAdata 1.37.0 2023-10-24 [2] Bioconductor
## gt 0.10.0 2023-10-07 [2] CRAN (R 4.3.1)
## gtable 0.3.4 2023-08-21 [2] CRAN (R 4.3.1)
## gtools 3.9.4 2022-11-27 [2] CRAN (R 4.3.1)
## gtrellis 1.34.0 2023-10-24 [2] Bioconductor
## GUIDEseq 1.32.0 2023-10-24 [2] Bioconductor
## Guitar 2.18.0 2023-10-24 [2] Bioconductor
## GUniFrac 1.8 2023-09-14 [2] CRAN (R 4.3.1)
## Gviz 1.46.0 2023-10-24 [2] Bioconductor
## GWAS.BAYES 1.12.0 2023-10-24 [2] Bioconductor
## gwascat 2.34.0 2023-10-24 [2] Bioconductor
## gwascatData 0.99.6 2023-10-25 [2] Bioconductor
## GWASdata 1.39.1 2023-10-24 [2] Bioconductor
## GWASExactHW 1.01 2013-01-05 [2] CRAN (R 4.3.1)
## GWASTools 1.48.0 2023-10-24 [2] Bioconductor
## gwasurvivr 1.20.0 2023-10-24 [2] Bioconductor
## GWENA 1.12.0 2023-10-24 [2] Bioconductor
## h5vc 2.36.0 2023-10-24 [2] local
## h5vcData 2.21.0 2023-10-24 [2] Bioconductor
## hapFabia 1.44.0 2023-10-24 [2] Bioconductor
## haplo.stats 1.9.3 2023-01-20 [2] CRAN (R 4.3.1)
## hapmap100khind 1.43.0 2023-10-24 [2] Bioconductor
## hapmap100kxba 1.43.0 2023-10-24 [2] Bioconductor
## hapmap500knsp 1.43.0 2023-10-24 [2] Bioconductor
## hapmap500ksty 1.43.0 2023-10-24 [2] Bioconductor
## hapmapsnp5 1.43.0 2023-10-24 [2] Bioconductor
## hapmapsnp6 1.43.0 2023-10-24 [2] Bioconductor
## harbChIP 1.39.0 2023-10-24 [2] Bioconductor
## hardhat 1.3.0 2023-03-30 [2] CRAN (R 4.3.1)
## HardyWeinberg 1.7.5 2022-05-07 [2] CRAN (R 4.3.1)
## Harman 1.30.0 2023-10-24 [2] Bioconductor
## HarmanData 1.29.0 2023-10-24 [2] Bioconductor
## harmonicmeanp 3.0 2019-08-19 [2] CRAN (R 4.3.1)
## HarmonizedTCGAData 1.23.0 2023-10-24 [2] Bioconductor
## HarmonizR 1.0.0 2023-10-24 [2] Bioconductor
## harmony 1.1.0 2023-10-23 [2] CRAN (R 4.3.1)
## Harshlight 1.74.0 2023-10-24 [2] Bioconductor
## hash 2.2.6.3 2023-08-19 [2] CRAN (R 4.3.1)
## haven 2.5.3 2023-06-30 [2] CRAN (R 4.3.1)
## hca 1.10.0 2023-10-24 [2] Bioconductor
## HCAData 1.17.0 2023-10-24 [2] Bioconductor
## HCATonsilData 0.99.5 2023-10-24 [2] Bioconductor
## HD2013SGI 1.41.0 2023-10-24 [2] Bioconductor
## HDCI 1.0-2 2017-06-06 [2] CRAN (R 4.3.1)
## HDCytoData 1.21.0 2023-10-24 [2] Bioconductor
## HDF5Array 1.30.0 2023-10-24 [2] Bioconductor
## hdf5r 1.3.8 2023-01-21 [2] CRAN (R 4.3.1)
## HDInterval 0.2.4 2022-11-17 [2] CRAN (R 4.3.1)
## HDO.db 0.99.1 2023-06-20 [2] Bioconductor
## hdrcde 3.4 2021-01-18 [2] CRAN (R 4.3.1)
## HDTD 1.36.0 2023-10-24 [2] Bioconductor
## healthyControlsPresenceChecker 1.5.0 2023-10-24 [2] Bioconductor
## healthyFlowData 1.39.0 2023-10-24 [2] Bioconductor
## heatmap3 1.1.9 2021-01-06 [2] CRAN (R 4.3.1)
## heatmaply 1.5.0 2023-10-06 [2] CRAN (R 4.3.1)
## heatmaps 1.26.0 2023-10-24 [2] Bioconductor
## Heatplus 3.10.0 2023-10-24 [2] Bioconductor
## HEEBOdata 1.39.0 2023-10-24 [2] Bioconductor
## HelloRanges 1.28.0 2023-10-24 [2] Bioconductor
## HelloRangesData 1.27.0 2023-10-24 [2] Bioconductor
## HELP 1.60.0 2023-10-24 [2] Bioconductor
## HEM 1.74.0 2023-10-24 [2] Bioconductor
## here 1.0.1 2020-12-13 [2] CRAN (R 4.3.1)
## hermes 1.6.0 2023-10-24 [2] Bioconductor
## HERON 1.0.0 2023-10-24 [2] Bioconductor
## Herper 1.12.0 2023-10-24 [2] Bioconductor
## hexbin 1.28.3 2023-03-21 [2] CRAN (R 4.3.1)
## HGC 1.10.0 2023-10-24 [2] Bioconductor
## hgfocuscdf 2.18.0 2023-06-20 [2] Bioconductor
## hgfocusprobe 2.18.0 2023-06-20 [2] Bioconductor
## HGNChelper 0.8.1 2019-10-24 [2] CRAN (R 4.3.1)
## hgu133a.db 3.13.0 2023-06-20 [2] Bioconductor
## hgu133a2.db 3.13.0 2023-06-20 [2] Bioconductor
## hgu133abarcodevecs 1.39.0 2023-10-24 [2] Bioconductor
## hgu133acdf 2.18.0 2023-06-20 [2] Bioconductor
## hgu133afrmavecs 1.5.0 2023-06-20 [2] Bioconductor
## hgu133aprobe 2.18.0 2023-06-20 [2] Bioconductor
## hgu133atagcdf 2.18.0 2023-06-20 [2] Bioconductor
## hgu133atagprobe 2.18.0 2023-06-20 [2] Bioconductor
## hgu133plus2.db 3.13.0 2023-06-20 [2] Bioconductor
## hgu133plus2barcodevecs 1.39.0 2023-10-24 [2] Bioconductor
## hgu133plus2cdf 2.18.0 2023-06-20 [2] Bioconductor
## hgu133plus2CellScore 1.21.0 2023-10-24 [2] Bioconductor
## hgu133plus2frmavecs 1.5.0 2023-06-22 [2] Bioconductor
## hgu133plus2probe 2.18.0 2023-06-20 [2] Bioconductor
## hgu2beta7 1.41.0 2023-10-24 [2] Bioconductor
## hgu95a.db 3.13.0 2023-06-20 [2] Bioconductor
## hgu95acdf 2.18.0 2023-06-20 [2] Bioconductor
## hgu95av2 2.2.0 2023-06-20 [2] Bioconductor
## hgu95av2.db 3.13.0 2023-06-20 [2] Bioconductor
## hgu95av2cdf 2.18.0 2023-06-20 [2] Bioconductor
## hgu95av2probe 2.18.0 2023-06-20 [2] Bioconductor
## HH 3.1-49 2022-08-09 [2] CRAN (R 4.3.1)
## hiAnnotator 1.36.0 2023-10-24 [2] Bioconductor
## HIBAG 1.38.0 2023-10-24 [2] Bioconductor
## HiBED 0.99.15 2023-10-24 [2] Bioconductor
## HiCBricks 1.20.0 2023-10-24 [2] Bioconductor
## HiCcompare 1.24.0 2023-10-24 [2] Bioconductor
## HiCDataHumanIMR90 1.21.0 2023-10-24 [2] Bioconductor
## HiCDataLymphoblast 1.37.0 2023-10-24 [2] Bioconductor
## HiCDCPlus 1.10.0 2023-10-24 [2] Bioconductor
## HiCDOC 1.4.0 2023-10-24 [2] Bioconductor
## HiCExperiment 1.2.0 2023-10-24 [2] Bioconductor
## HiContacts 1.4.0 2023-10-24 [2] Bioconductor
## HiContactsData 1.3.0 2023-10-24 [2] Bioconductor
## HiCool 1.2.0 2023-10-24 [2] Bioconductor
## hicVennDiagram 1.0.0 2023-10-24 [2] Bioconductor
## HiddenMarkov 1.8-13 2021-04-27 [2] CRAN (R 4.3.1)
## hierGWAS 1.32.0 2023-10-24 [2] Bioconductor
## hierinf 1.20.0 2023-10-24 [2] Bioconductor
## highcharter 0.9.4 2022-01-03 [2] CRAN (R 4.3.1)
## HighlyReplicatedRNASeq 1.13.0 2023-10-24 [2] Bioconductor
## highr 0.10 2022-12-22 [2] CRAN (R 4.3.1)
## highthroughputassays 1.27.0 2023-10-24 [2] Bioconductor
## Hiiragi2013 1.37.0 2023-10-24 [2] Bioconductor
## HilbertCurve 1.32.0 2023-10-24 [2] Bioconductor
## HilbertVis 1.60.0 2023-10-24 [2] Bioconductor
## HilbertVisGUI 1.60.0 2023-10-24 [2] Bioconductor
## HiLDA 1.16.0 2023-10-24 [2] Bioconductor
## hipathia 3.2.0 2023-10-24 [2] Bioconductor
## HIPPO 1.14.0 2023-10-24 [2] Bioconductor
## hiReadsProcessor 1.38.0 2023-10-24 [2] Bioconductor
## HIREewas 1.20.0 2023-10-24 [2] Bioconductor
## HiTC 1.46.0 2023-10-24 [2] Bioconductor
## HIVcDNAvantWout03 1.41.0 2023-10-24 [2] Bioconductor
## HiveR 0.3.63 2020-06-09 [2] CRAN (R 4.3.1)
## hmdbQuery 1.22.0 2023-10-24 [2] Bioconductor
## Hmisc 5.1-1 2023-09-12 [2] CRAN (R 4.3.1)
## HMMcopy 1.44.0 2023-10-24 [2] Bioconductor
## HMP16SData 1.21.0 2023-10-24 [2] Bioconductor
## HMP2Data 1.15.0 2023-10-24 [2] Bioconductor
## hms 1.1.3 2023-03-21 [2] CRAN (R 4.3.1)
## Homo.sapiens 1.3.1 2023-06-20 [2] Bioconductor
## homologene 1.4.68.19.3.27 2019-03-28 [2] CRAN (R 4.3.1)
## hoodscanR 1.0.0 2023-10-24 [2] Bioconductor
## hopach 2.62.0 2023-10-24 [2] Bioconductor
## howmany 0.3-1 2012-06-01 [2] CRAN (R 4.3.1)
## HPAanalyze 1.20.0 2023-10-24 [2] Bioconductor
## hpAnnot 1.1.0 2023-10-25 [2] Bioconductor
## hpar 1.44.0 2023-10-24 [2] Bioconductor
## HPAStainR 1.12.0 2023-10-24 [2] Bioconductor
## HPiP 1.8.0 2023-10-24 [2] Bioconductor
## HPO.db 0.99.2 2023-10-25 [2] Bioconductor
## hrbrthemes 0.8.0 2020-03-06 [2] CRAN (R 4.3.1)
## HSMMSingleCell 1.21.0 2023-10-24 [2] Bioconductor
## htm2txt 2.2.2 2022-06-12 [2] CRAN (R 4.3.1)
## htmlTable 2.4.1 2022-07-07 [2] CRAN (R 4.3.1)
## htmltools 0.5.6.1 2023-10-06 [2] CRAN (R 4.3.1)
## HTMLUtils 0.1.8 2022-06-11 [2] CRAN (R 4.3.1)
## htmlwidgets 1.6.2 2023-03-17 [2] CRAN (R 4.3.1)
## HTqPCR 1.56.0 2023-10-24 [2] Bioconductor
## HTSCluster 2.0.11 2023-09-05 [2] CRAN (R 4.3.1)
## HTSeqGenie 4.32.0 2023-10-24 [2] local
## HTSFilter 1.42.0 2023-10-24 [2] Bioconductor
## httpcache 1.2.0 2021-01-10 [2] CRAN (R 4.3.1)
## httpcode 0.3.0 2020-04-10 [2] CRAN (R 4.3.1)
## httptest 4.2.1 2023-06-12 [2] CRAN (R 4.3.1)
## httpuv 1.6.12 2023-10-23 [2] CRAN (R 4.3.1)
## httr 1.4.7 2023-08-15 [2] CRAN (R 4.3.1)
## httr2 0.2.3 2023-05-08 [2] CRAN (R 4.3.1)
## hu6800.db 3.13.0 2023-06-20 [2] Bioconductor
## HubPub 1.10.0 2023-10-24 [2] Bioconductor
## huge 1.3.5 2021-06-30 [2] CRAN (R 4.3.1)
## hugene10sttranscriptcluster.db 8.8.0 2023-06-23 [2] Bioconductor
## human.db0 3.18.0 2023-09-21 [2] Bioconductor
## human370v1cCrlmm 1.0.2 2023-06-20 [2] Bioconductor
## human610quadv1bCrlmm 1.0.3 2023-06-20 [2] Bioconductor
## HumanAffyData 1.27.0 2023-10-24 [2] Bioconductor
## humanCHRLOC 2.1.6 2023-06-20 [2] Bioconductor
## humanStemCell 0.41.0 2023-10-24 [2] Bioconductor
## HumanTranscriptomeCompendium 1.18.0 2023-10-24 [2] Bioconductor
## hummingbird 1.12.0 2023-10-24 [2] Bioconductor
## hunspell 3.0.3 2023-10-06 [2] CRAN (R 4.3.1)
## hwriter 1.3.2.1 2022-04-08 [2] CRAN (R 4.3.1)
## HybridMTest 1.46.0 2023-10-24 [2] Bioconductor
## hypeR 2.0.0 2023-10-24 [2] Bioconductor
## hyperdraw 1.54.0 2023-10-24 [2] Bioconductor
## hypergraph 1.74.0 2023-10-24 [2] Bioconductor
## iASeq 1.46.0 2023-10-24 [2] Bioconductor
## iasva 1.20.0 2023-10-24 [2] Bioconductor
## iBBiG 1.46.0 2023-10-24 [2] Bioconductor
## ibh 1.50.0 2023-10-24 [2] Bioconductor
## iBMQ 1.42.0 2023-10-24 [2] Bioconductor
## iC10 1.5 2019-02-08 [2] CRAN (R 4.3.1)
## iC10TrainingData 1.3.1 2018-08-24 [2] CRAN (R 4.3.1)
## ica 1.0-3 2022-07-08 [2] CRAN (R 4.3.1)
## iCARE 1.30.0 2023-10-24 [2] Bioconductor
## Icens 1.74.0 2023-10-24 [2] Bioconductor
## icetea 1.20.0 2023-10-24 [2] Bioconductor
## iCheck 1.32.0 2023-10-24 [2] Bioconductor
## iChip 1.56.0 2023-10-24 [2] Bioconductor
## iClusterPlus 1.38.0 2023-10-24 [2] Bioconductor
## iCNV 1.22.0 2023-10-24 [2] Bioconductor
## iCOBRA 1.30.0 2023-10-24 [2] Bioconductor
## ICS 1.4-1 2023-09-21 [2] CRAN (R 4.3.1)
## ICSNP 1.1-2 2023-09-18 [2] CRAN (R 4.3.1)
## ideal 1.26.0 2023-10-24 [2] Bioconductor
## IdeoViz 1.38.0 2023-10-24 [2] Bioconductor
## idiogram 1.78.0 2023-10-24 [2] Bioconductor
## IDPmisc 1.1.20 2020-01-21 [2] CRAN (R 4.3.1)
## idpr 1.12.0 2023-10-24 [2] Bioconductor
## idr 1.3 2022-06-21 [2] CRAN (R 4.3.1)
## idr2d 1.16.0 2023-10-24 [2] Bioconductor
## ids 1.0.1 2017-05-31 [2] CRAN (R 4.3.1)
## IFAA 1.4.0 2023-10-24 [2] Bioconductor
## iGC 1.32.0 2023-10-24 [2] Bioconductor
## IgGeneUsage 1.16.0 2023-10-24 [2] Bioconductor
## igraph 1.5.1 2023-08-10 [2] CRAN (R 4.3.1)
## igraphdata 1.0.1 2015-07-13 [2] CRAN (R 4.3.1)
## igvR 1.22.0 2023-10-24 [2] Bioconductor
## IHW 1.30.0 2023-10-24 [2] Bioconductor
## IHWpaper 1.29.0 2023-10-24 [2] Bioconductor
## Illumina450ProbeVariants.db 1.37.0 2023-10-24 [2] Bioconductor
## IlluminaDataTestFiles 1.39.0 2023-10-24 [2] Bioconductor
## IlluminaHumanMethylation450kanno.ilmn12.hg19 0.6.1 2023-06-20 [2] Bioconductor
## IlluminaHumanMethylation450kmanifest 0.4.0 2023-06-20 [2] Bioconductor
## IlluminaHumanMethylationEPICanno.ilm10b2.hg19 0.6.0 2023-06-20 [2] Bioconductor
## IlluminaHumanMethylationEPICanno.ilm10b4.hg19 0.6.0 2023-06-20 [2] Bioconductor
## IlluminaHumanMethylationEPICmanifest 0.3.0 2023-06-20 [2] Bioconductor
## illuminaHumanv1.db 1.26.0 2023-06-20 [2] Bioconductor
## illuminaHumanv2.db 1.26.0 2023-06-22 [2] Bioconductor
## illuminaHumanv3.db 1.26.0 2023-06-20 [2] Bioconductor
## illuminaHumanv4.db 1.26.0 2023-06-20 [2] Bioconductor
## illuminaio 0.44.0 2023-10-24 [2] Bioconductor
## ILoReg 1.12.0 2023-10-24 [2] Bioconductor
## imageHTS 1.52.0 2023-10-24 [2] Bioconductor
## imager 0.45.2 2023-05-10 [2] CRAN (R 4.3.1)
## IMAS 1.26.0 2023-10-24 [2] Bioconductor
## imcdatasets 1.9.0 2023-10-24 [2] Bioconductor
## imcRtools 1.8.0 2023-10-24 [2] Bioconductor
## iml 0.11.1 2022-09-08 [2] CRAN (R 4.3.1)
## IMMAN 1.22.0 2023-10-24 [2] Bioconductor
## ImmuneSpaceR 1.30.0 2023-10-24 [2] Bioconductor
## immunoClust 1.34.0 2023-10-24 [2] Bioconductor
## immunotation 1.10.0 2023-10-24 [2] Bioconductor
## imp4p 1.2 2021-09-02 [2] CRAN (R 4.3.1)
## IMPCdata 1.38.0 2023-10-24 [2] Bioconductor
## import 1.3.1 2023-09-23 [2] CRAN (R 4.3.1)
## impute 1.76.0 2023-10-24 [2] Bioconductor
## imputeLCMD 2.1 2022-06-10 [2] CRAN (R 4.3.1)
## inaparc 1.2.0 2022-06-16 [2] CRAN (R 4.3.1)
## INDEED 2.16.0 2023-10-24 [2] Bioconductor
## ineq 0.2-13 2014-07-21 [2] CRAN (R 4.3.1)
## iNETgrate 1.0.0 2023-10-24 [2] Bioconductor
## infercnv 1.18.0 2023-10-24 [2] Bioconductor
## infinityFlow 1.12.0 2023-10-24 [2] Bioconductor
## Informeasure 1.12.0 2023-10-24 [2] Bioconductor
## infotheo 1.2.0.1 2022-04-08 [2] CRAN (R 4.3.1)
## ini 0.3.1 2018-05-20 [2] CRAN (R 4.3.1)
## inline 0.3.19 2021-05-31 [2] CRAN (R 4.3.1)
## InPAS 2.10.0 2023-10-24 [2] Bioconductor
## INPower 1.38.0 2023-10-24 [2] Bioconductor
## insight 0.19.6 2023-10-12 [2] CRAN (R 4.3.1)
## INSPEcT 1.31.0 2023-10-16 [2] Bioconductor
## INTACT 1.2.0 2023-10-24 [2] Bioconductor
## InTAD 1.22.0 2023-10-24 [2] Bioconductor
## intansv 1.42.0 2023-10-24 [2] Bioconductor
## interacCircos 1.12.0 2023-10-24 [2] Bioconductor
## InteractionSet 1.30.0 2023-10-24 [2] Bioconductor
## InteractiveComplexHeatmap 1.10.0 2023-10-24 [2] Bioconductor
## interactiveDisplay 1.40.0 2023-10-24 [2] Bioconductor
## interactiveDisplayBase 1.40.0 2023-10-24 [2] Bioconductor
## InterCellar 2.8.0 2023-10-24 [2] Bioconductor
## IntEREst 1.26.0 2023-10-24 [2] Bioconductor
## intergraph 2.0-3 2023-08-20 [2] CRAN (R 4.3.1)
## InterMineR 1.24.0 2023-10-24 [2] Bioconductor
## interp 1.1-4 2023-03-31 [2] CRAN (R 4.3.1)
## intervals 0.15.4 2023-06-29 [2] CRAN (R 4.3.1)
## IntOMICS 1.2.0 2023-10-24 [2] Bioconductor
## IntramiRExploreR 1.24.0 2023-10-24 [2] Bioconductor
## intrinsicDimension 1.2.0 2019-06-07 [2] CRAN (R 4.3.1)
## inum 1.0-5 2023-03-09 [2] CRAN (R 4.3.1)
## InvariantCausalPrediction 0.8 2019-11-10 [2] CRAN (R 4.3.1)
## invgamma 1.1 2017-05-07 [2] CRAN (R 4.3.1)
## IONiseR 2.26.0 2023-10-24 [2] Bioconductor
## iPAC 1.46.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## iPath 1.8.0 2023-10-24 [2] Bioconductor
## ipdDb 1.20.0 2023-10-24 [2] Bioconductor
## ipflasso 1.1 2019-12-10 [2] CRAN (R 4.3.1)
## IPO 1.28.0 2023-10-24 [2] Bioconductor
## ipred 0.9-14 2023-03-09 [2] CRAN (R 4.3.1)
## IRanges 2.36.0 2023-10-24 [2] Bioconductor
## IRdisplay 1.1 2022-01-04 [2] CRAN (R 4.3.1)
## IRISFGM 1.10.0 2023-10-24 [2] Bioconductor
## IRkernel 1.3.2 2023-01-20 [2] CRAN (R 4.3.1)
## irlba 2.3.5.1 2022-10-03 [2] CRAN (R 4.3.1)
## irr 0.84.1 2019-01-26 [2] CRAN (R 4.3.1)
## isa2 0.3.6 2023-02-21 [2] CRAN (R 4.3.1)
## ISAnalytics 1.12.0 2023-10-24 [2] Bioconductor
## iSEE 2.14.0 2023-10-24 [2] Bioconductor
## iSEEde 1.0.0 2023-10-24 [2] Bioconductor
## iSEEhex 1.4.0 2023-10-24 [2] Bioconductor
## iSEEhub 1.4.0 2023-10-24 [2] Bioconductor
## iSEEindex 1.0.0 2023-10-24 [2] Bioconductor
## iSEEpathways 1.0.0 2023-10-24 [2] Bioconductor
## iSEEu 1.14.0 2023-10-24 [2] Bioconductor
## iSeq 1.54.0 2023-10-24 [2] Bioconductor
## ISLET 1.4.0 2023-10-24 [2] Bioconductor
## Iso 0.0-21 2023-10-02 [2] CRAN (R 4.3.1)
## isoband 0.2.7 2022-12-20 [2] CRAN (R 4.3.1)
## isobar 1.48.0 2023-10-24 [2] Bioconductor
## IsoBayes 1.0.0 2023-10-24 [2] Bioconductor
## ISOcodes 2022.09.29 2022-09-30 [2] CRAN (R 4.3.1)
## IsoCorrectoR 1.20.0 2023-10-24 [2] Bioconductor
## IsoCorrectoRGUI 1.18.0 2023-10-24 [2] Bioconductor
## IsoformSwitchAnalyzeR 2.2.0 2023-10-24 [2] Bioconductor
## ISoLDE 1.30.0 2023-10-24 [2] Bioconductor
## isomiRs 1.30.0 2023-10-24 [2] Bioconductor
## isotree 0.5.22 2023-08-07 [2] CRAN (R 4.3.1)
## isva 1.9 2017-01-14 [2] CRAN (R 4.3.1)
## ITALICS 2.62.0 2023-10-24 [2] Bioconductor
## ITALICSData 2.39.0 2023-10-24 [2] Bioconductor
## iterativeBMA 1.60.0 2023-10-24 [2] Bioconductor
## iterativeBMAsurv 1.60.0 2023-10-24 [2] Bioconductor
## iterators 1.0.14 2022-02-05 [2] CRAN (R 4.3.1)
## iterClust 1.24.0 2023-10-24 [2] Bioconductor
## itertools 0.1-3 2014-03-12 [2] CRAN (R 4.3.1)
## IVAS 2.22.0 2023-10-24 [2] Bioconductor
## ivygapSE 1.24.0 2023-10-24 [2] Bioconductor
## IWTomics 1.26.0 2023-10-24 [2] Bioconductor
## Iyer517 1.43.0 2023-10-24 [2] Bioconductor
## JADE 2.0-4 2023-09-17 [2] CRAN (R 4.3.1)
## janeaustenr 1.0.0 2022-08-26 [2] CRAN (R 4.3.1)
## janitor 2.2.0 2023-02-02 [2] CRAN (R 4.3.1)
## JASPAR2014 1.37.1 2023-10-24 [2] Bioconductor
## JASPAR2016 1.29.1 2023-10-24 [2] Bioconductor
## JASPAR2018 1.1.1 2023-06-20 [2] Bioconductor
## JASPAR2020 0.99.8 2023-10-25 [2] Bioconductor
## JASPAR2022 0.99.7 2023-10-25 [2] Bioconductor
## JASPAR2024 0.99.6 2023-10-25 [2] Bioconductor
## jomo 2.7-6 2023-04-15 [2] CRAN (R 4.3.1)
## jose 1.2.0 2021-11-06 [2] CRAN (R 4.3.1)
## jpeg 0.1-10 2022-11-29 [2] CRAN (R 4.3.1)
## jquerylib 0.1.4 2021-04-26 [2] CRAN (R 4.3.1)
## jsonlite 1.8.7 2023-06-29 [2] CRAN (R 4.3.1)
## jsonvalidate 1.3.2 2021-11-03 [2] CRAN (R 4.3.1)
## juicyjuice 0.1.0 2022-11-10 [2] CRAN (R 4.3.1)
## kableExtra 1.3.4 2021-02-20 [2] CRAN (R 4.3.1)
## karyoploteR 1.28.0 2023-10-24 [2] Bioconductor
## katdetectr 1.4.0 2023-10-24 [2] Bioconductor
## KBoost 1.10.0 2023-10-24 [2] Bioconductor
## KCsmart 2.60.0 2023-10-24 [2] Bioconductor
## kde1d 1.0.5 2022-09-16 [2] CRAN (R 4.3.1)
## kebabs 1.36.0 2023-10-24 [2] Bioconductor
## KEGGandMetacoreDzPathwaysGEO 1.21.0 2023-10-24 [2] Bioconductor
## KEGGdzPathwaysGEO 1.39.0 2023-10-24 [2] Bioconductor
## KEGGgraph 1.62.0 2023-10-24 [2] Bioconductor
## KEGGlincs 1.28.0 2023-10-24 [2] Bioconductor
## keggorthology 2.54.0 2023-10-24 [2] Bioconductor
## KEGGREST 1.42.0 2023-10-24 [2] Bioconductor
## Kendall 2.2.1 2022-03-20 [2] CRAN (R 4.3.1)
## keras 2.13.0 2023-08-15 [2] CRAN (R 4.3.1)
## kernlab 0.9-32 2023-01-31 [2] CRAN (R 4.3.1)
## KernSmooth 2.23-22 2023-07-10 [3] CRAN (R 4.3.1)
## kidpack 1.43.0 2023-10-24 [2] Bioconductor
## kinship2 1.9.6 2022-10-05 [2] CRAN (R 4.3.1)
## KinSwingR 1.20.0 2023-10-24 [2] Bioconductor
## kissDE 1.22.0 2023-10-24 [2] Bioconductor
## kknn 1.3.1 2016-03-26 [2] CRAN (R 4.3.1)
## klaR 1.7-2 2023-03-17 [2] CRAN (R 4.3.1)
## km.ci 0.5-6 2022-04-06 [2] CRAN (R 4.3.1)
## kmer 1.1.2 2019-05-20 [2] CRAN (R 4.3.1)
## KMsurv 0.1-5 2012-12-03 [2] CRAN (R 4.3.1)
## knitcitations 1.0.12 2021-01-10 [2] CRAN (R 4.3.1)
## knitr 1.44 2023-09-11 [2] CRAN (R 4.3.1)
## knitrBootstrap 1.0.2 2018-05-24 [2] CRAN (R 4.3.1)
## knn.covertree 1.0 2019-10-28 [2] CRAN (R 4.3.1)
## KnowSeq 1.16.0 2023-10-24 [2] Bioconductor
## KOdata 1.27.0 2023-10-24 [2] Bioconductor
## kohonen 3.0.12 2023-06-09 [2] CRAN (R 4.3.1)
## koRpus 0.13-8 2021-05-17 [2] CRAN (R 4.3.1)
## koRpus.lang.en 0.1-4 2020-10-24 [2] CRAN (R 4.3.1)
## kpeaks 1.1.0 2020-02-08 [2] CRAN (R 4.3.1)
## kpmt 0.1.0 2017-08-01 [2] CRAN (R 4.3.1)
## kriging 1.2 2022-06-24 [2] CRAN (R 4.3.1)
## ks 1.14.1 2023-08-10 [2] CRAN (R 4.3.1)
## kSamples 1.2-10 2023-10-07 [2] CRAN (R 4.3.1)
## labdsv 2.1-0 2023-04-10 [2] CRAN (R 4.3.1)
## labeling 0.4.3 2023-08-29 [2] CRAN (R 4.3.1)
## labelled 2.12.0 2023-06-21 [2] CRAN (R 4.3.1)
## LACE 2.6.0 2023-10-24 [2] Bioconductor
## laeken 0.5.2 2021-10-06 [2] CRAN (R 4.3.1)
## lambda.r 1.2.4 2019-09-18 [2] CRAN (R 4.3.1)
## LambertW 0.6.8 2023-09-03 [2] CRAN (R 4.3.1)
## lamW 2.2.1 2023-10-04 [2] CRAN (R 4.3.1)
## LaplacesDemon 16.1.6 2021-07-09 [2] CRAN (R 4.3.1)
## lapmix 1.68.0 2023-10-24 [2] Bioconductor
## lars 1.3 2022-04-13 [2] CRAN (R 4.3.1)
## lassopv 0.2.0 2018-02-22 [2] CRAN (R 4.3.1)
## later 1.3.1 2023-05-02 [2] CRAN (R 4.3.1)
## latex2exp 0.9.6 2022-11-28 [2] CRAN (R 4.3.1)
## lattice 0.22-5 2023-10-24 [3] CRAN (R 4.3.1)
## latticeExtra 0.6-30 2022-07-04 [2] CRAN (R 4.3.1)
## lava 1.7.2.1 2023-02-27 [2] CRAN (R 4.3.1)
## lavaan 0.6-16 2023-07-19 [2] CRAN (R 4.3.1)
## lazyeval 0.2.2 2019-03-15 [2] CRAN (R 4.3.1)
## LBE 1.70.0 2023-10-24 [2] Bioconductor
## lbfgs 1.2.1.2 2022-06-23 [2] CRAN (R 4.3.1)
## ldblock 1.32.0 2023-10-24 [2] local
## LDlinkR 1.3.0 2023-05-31 [2] CRAN (R 4.3.1)
## LEA 3.14.0 2023-10-24 [2] Bioconductor
## leaps 3.1 2020-01-16 [2] CRAN (R 4.3.1)
## learnr 0.11.5 2023-09-28 [2] CRAN (R 4.3.1)
## LedPred 1.36.0 2023-10-24 [2] Bioconductor
## leeBamViews 1.37.0 2023-10-24 [2] Bioconductor
## lefser 1.11.5 2023-10-22 [2] Bioconductor
## leiden 0.4.3 2022-09-10 [2] CRAN (R 4.3.1)
## leidenbase 0.1.25 2023-07-19 [2] CRAN (R 4.3.1)
## lemur 1.0.0 2023-10-24 [2] Bioconductor
## les 1.52.0 2023-10-24 [2] Bioconductor
## leukemiasEset 1.37.0 2023-10-24 [2] Bioconductor
## levi 1.20.0 2023-10-24 [2] Bioconductor
## lexicon 1.2.1 2019-03-21 [2] CRAN (R 4.3.1)
## lfa 2.2.0 2023-10-24 [2] Bioconductor
## lfda 1.1.3 2019-07-31 [2] CRAN (R 4.3.1)
## lgr 0.4.4 2022-09-05 [2] CRAN (R 4.3.1)
## lhs 1.1.6 2022-12-17 [2] CRAN (R 4.3.1)
## libcoin 1.0-10 2023-09-27 [2] CRAN (R 4.3.1)
## LiblineaR 2.10-22 2022-12-03 [2] CRAN (R 4.3.1)
## LiebermanAidenHiC2009 0.39.0 2023-10-24 [2] Bioconductor
## lifecycle 1.0.3 2022-10-07 [2] CRAN (R 4.3.1)
## liftOver 1.27.0 2023-10-24 [2] Bioconductor
## liger 2.0.1 2021-01-25 [2] CRAN (R 4.3.1)
## LIM 1.4.7 2022-05-11 [2] CRAN (R 4.3.1)
## limma 3.58.0 2023-10-24 [2] Bioconductor
## limmaGUI 1.78.0 2023-10-24 [2] Bioconductor
## limSolve 1.5.7 2023-09-21 [2] CRAN (R 4.3.1)
## LineagePulse 1.21.0 2023-10-04 [2] Bioconductor
## lineagespot 1.6.0 2023-10-24 [2] Bioconductor
## linkcomm 1.0-14 2021-02-04 [2] CRAN (R 4.3.1)
## LinkHD 1.16.0 2023-10-24 [2] Bioconductor
## Linnorm 2.26.0 2023-10-24 [2] Bioconductor
## linprog 0.9-4 2022-03-09 [2] CRAN (R 4.3.1)
## LinTInd 1.6.0 2023-10-24 [2] Bioconductor
## lintr 3.1.0 2023-07-19 [2] CRAN (R 4.3.1)
## lionessR 1.16.0 2023-10-24 [2] Bioconductor
## lipidr 2.16.0 2023-10-24 [2] Bioconductor
## LiquidAssociation 1.56.0 2023-10-24 [2] Bioconductor
## lisaClust 1.10.0 2023-10-24 [2] Bioconductor
## listenv 0.9.0 2022-12-16 [2] CRAN (R 4.3.1)
## ListerEtAlBSseq 1.33.2 2023-10-24 [2] Bioconductor
## listviewer 4.0.0 2023-09-30 [2] CRAN (R 4.3.1)
## lmdme 1.44.0 2023-10-24 [2] Bioconductor
## lme4 1.1-34 2023-07-04 [2] CRAN (R 4.3.1)
## lmerTest 3.1-3 2020-10-23 [2] CRAN (R 4.3.1)
## lmodel2 1.7-3 2018-02-05 [2] CRAN (R 4.3.1)
## lmom 3.0 2023-08-29 [2] CRAN (R 4.3.1)
## Lmoments 1.3-1 2019-03-15 [2] CRAN (R 4.3.1)
## lmtest 0.9-40 2022-03-21 [2] CRAN (R 4.3.1)
## LOBSTAHS 1.28.0 2023-10-24 [2] Bioconductor
## lobstr 1.1.2 2022-06-22 [2] CRAN (R 4.3.1)
## locfdr 1.1-8 2015-07-15 [2] CRAN (R 4.3.1)
## locfit 1.5-9.8 2023-06-11 [2] CRAN (R 4.3.1)
## loci2path 1.22.0 2023-10-24 [2] Bioconductor
## locStra 1.9 2022-04-12 [2] CRAN (R 4.3.1)
## log4r 0.4.3 2022-11-28 [2] CRAN (R 4.3.1)
## logger 0.2.2 2021-10-19 [2] CRAN (R 4.3.1)
## logging 0.10-108 2019-07-14 [2] CRAN (R 4.3.1)
## logicFS 2.22.0 2023-10-24 [2] Bioconductor
## LogicReg 1.6.6 2023-08-08 [2] CRAN (R 4.3.1)
## logistf 1.26.0 2023-08-18 [2] CRAN (R 4.3.1)
## logitnorm 0.8.38 2021-01-07 [2] CRAN (R 4.3.1)
## logitT 1.60.0 2023-10-24 [2] Bioconductor
## logNormReg 0.5-0 2021-11-08 [2] CRAN (R 4.3.1)
## logr 1.3.4 2023-06-25 [2] CRAN (R 4.3.1)
## logspline 2.1.20 2023-06-29 [2] CRAN (R 4.3.1)
## lokern 1.1-10 2023-02-21 [2] CRAN (R 4.3.1)
## LOLA 1.32.0 2023-10-24 [2] Bioconductor
## longitudinal 1.1.13 2021-11-13 [2] CRAN (R 4.3.1)
## loo 2.6.0 2023-03-31 [2] CRAN (R 4.3.1)
## LoomExperiment 1.20.0 2023-10-24 [2] Bioconductor
## LowMACA 1.32.0 2023-10-24 [2] Bioconductor
## LowMACAAnnotation 0.99.3 2023-06-20 [2] Bioconductor
## LPE 1.76.0 2023-10-24 [2] Bioconductor
## LPEadj 1.62.0 2023-10-24 [2] Bioconductor
## lpNet 2.34.0 2023-10-24 [2] Bioconductor
## lpSolve 5.6.19 2023-09-13 [2] CRAN (R 4.3.1)
## lpSolveAPI 5.5.2.0-17.10 2023-09-03 [2] CRAN (R 4.3.1)
## lpsymphony 1.30.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## LRBaseDbi 2.12.0 2023-10-24 [2] Bioconductor
## LRcell 1.10.0 2023-10-24 [2] Bioconductor
## LRcellTypeMarkers 1.9.0 2023-10-24 [2] Bioconductor
## lsa 0.73.3 2022-05-09 [2] CRAN (R 4.3.1)
## LSD 4.1-0 2020-06-17 [2] CRAN (R 4.3.1)
## lsr 0.5.2 2021-12-01 [2] CRAN (R 4.3.1)
## lubridate 1.9.3 2023-09-27 [2] CRAN (R 4.3.1)
## lumi 2.54.0 2023-10-24 [2] Bioconductor
## lumiBarnes 1.41.0 2023-10-24 [2] Bioconductor
## lumiHumanAll.db 1.22.0 2023-06-20 [2] Bioconductor
## lumiHumanIDMapping 1.10.1 2023-06-20 [2] Bioconductor
## LungCancerACvsSCCGEO 1.37.0 2023-10-24 [2] Bioconductor
## LungCancerLines 0.39.0 2023-10-24 [2] Bioconductor
## lungExpression 0.39.0 2023-10-24 [2] Bioconductor
## lwgeom 0.2-13 2023-05-22 [2] CRAN (R 4.3.1)
## lydata 1.27.0 2023-10-24 [2] Bioconductor
## LymphoSeq 1.30.0 2023-10-24 [2] Bioconductor
## LymphoSeqDB 0.99.2 2023-06-20 [2] Bioconductor
## M3C 1.24.0 2023-10-24 [2] Bioconductor
## M3DExampleData 1.27.0 2023-10-24 [2] Bioconductor
## M3Drop 1.28.0 2023-10-24 [2] Bioconductor
## m6Aboost 1.8.0 2023-10-24 [2] Bioconductor
## Maaslin2 1.16.0 2023-10-24 [2] Bioconductor
## Macarron 1.6.0 2023-10-24 [2] Bioconductor
## macat 1.76.0 2023-10-24 [2] Bioconductor
## maCorrPlot 1.72.0 2023-10-24 [2] Bioconductor
## macrophage 1.17.0 2023-10-24 [2] Bioconductor
## MACSdata 1.9.0 2023-10-24 [2] Bioconductor
## MACSQuantifyR 1.16.0 2023-10-24 [2] Bioconductor
## MACSr 1.10.0 2023-10-24 [2] Bioconductor
## made4 1.76.0 2023-10-24 [2] Bioconductor
## MADSEQ 1.28.0 2023-10-24 [2] Bioconductor
## maEndToEnd 2.23.0 2023-10-24 [2] Bioconductor
## MafDb.1Kgenomes.phase1.hs37d5 3.10.0 2023-06-20 [2] Bioconductor
## MafDb.1Kgenomes.phase3.GRCh38 3.10.0 2023-06-20 [2] Bioconductor
## MafDb.1Kgenomes.phase3.hs37d5 3.10.0 2023-06-20 [2] Bioconductor
## MafDb.ExAC.r1.0.hs37d5 3.10.0 2023-06-20 [2] Bioconductor
## MafDb.gnomADex.r2.1.hs37d5 3.10.0 2023-06-20 [2] Bioconductor
## maftools 2.18.0 2023-10-24 [2] Bioconductor
## MAGAR 1.10.0 2023-10-24 [2] Bioconductor
## MAGeCKFlute 2.6.0 2023-10-24 [2] Bioconductor
## magic 1.6-1 2022-11-16 [2] CRAN (R 4.3.1)
## magicaxis 2.2.14 2022-02-22 [2] CRAN (R 4.3.1)
## magick 2.8.1 2023-10-22 [2] CRAN (R 4.3.1)
## magpie 1.2.0 2023-10-24 [2] Bioconductor
## magrene 1.4.0 2023-10-24 [2] Bioconductor
## magrittr 2.0.3 2022-03-30 [2] CRAN (R 4.3.1)
## MAI 1.8.0 2023-10-24 [2] Bioconductor
## maigesPack 1.66.0 2023-10-24 [2] Bioconductor
## MAIT 1.36.0 2023-10-24 [2] Bioconductor
## makecdfenv 1.78.0 2023-10-24 [2] Bioconductor
## MALDIquant 1.22.1 2023-03-20 [2] CRAN (R 4.3.1)
## MALDIquantForeign 0.14 2023-08-11 [2] CRAN (R 4.3.1)
## mammaPrintData 1.37.0 2023-10-24 [2] Bioconductor
## MANOR 1.74.0 2023-10-24 [2] Bioconductor
## MantelCorr 1.72.0 2023-10-24 [2] Bioconductor
## mAPKL 1.32.0 2023-10-24 [2] Bioconductor
## mAPKLData 1.33.0 2023-10-24 [2] Bioconductor
## mapplots 1.5.2 2023-08-25 [2] CRAN (R 4.3.1)
## mapproj 1.2.11 2023-01-12 [2] CRAN (R 4.3.1)
## maPredictDSC 1.40.0 2023-10-24 [2] Bioconductor
## maps 3.4.1 2022-10-30 [2] CRAN (R 4.3.1)
## mapscape 1.26.0 2023-10-24 [2] Bioconductor
## maptools 1.1-8 2023-07-18 [2] CRAN (R 4.3.1)
## maptree 1.4-8 2022-04-06 [2] CRAN (R 4.3.1)
## maqcExpression4plex 1.45.0 2023-10-24 [2] Bioconductor
## MAQCsubset 1.39.0 2023-10-24 [2] Bioconductor
## MAQCsubsetILM 1.39.2 2023-10-24 [2] Bioconductor
## mariner 1.2.0 2023-10-24 [2] Bioconductor
## marinerData 1.1.0 2023-10-24 [2] Bioconductor
## markdown 1.11 2023-10-19 [2] CRAN (R 4.3.1)
## marr 1.12.0 2023-10-24 [2] Bioconductor
## marray 1.80.0 2023-10-24 [2] Bioconductor
## martini 1.22.0 2023-10-24 [2] Bioconductor
## maser 1.20.0 2023-10-24 [2] Bioconductor
## mashr 0.2.79 2023-10-18 [2] CRAN (R 4.3.1)
## maSigPro 1.74.0 2023-10-24 [2] Bioconductor
## maskBAD 1.46.0 2023-10-24 [2] Bioconductor
## MASS 7.3-60 2023-05-04 [3] CRAN (R 4.3.1)
## MassArray 1.54.0 2023-10-24 [2] Bioconductor
## massiR 1.38.0 2023-10-24 [2] Bioconductor
## MassSpecWavelet 1.68.0 2023-10-24 [2] Bioconductor
## MAST 1.28.0 2023-10-24 [2] Bioconductor
## mastR 1.2.0 2023-10-24 [2] Bioconductor
## matchBox 1.44.0 2023-10-24 [2] Bioconductor
## Matching 4.10-14 2023-09-14 [2] CRAN (R 4.3.1)
## matchingR 1.3.3 2021-05-25 [2] CRAN (R 4.3.1)
## mathjaxr 1.6-0 2022-02-28 [2] CRAN (R 4.3.1)
## matlab 1.0.4 2022-06-01 [2] CRAN (R 4.3.1)
## Matrix 1.6-1.1 2023-09-18 [3] CRAN (R 4.3.1)
## matrixcalc 1.0-6 2022-09-14 [2] CRAN (R 4.3.1)
## MatrixCorrelation 0.10.0 2022-04-18 [2] CRAN (R 4.3.1)
## MatrixEQTL 2.3 2019-12-22 [2] CRAN (R 4.3.1)
## MatrixExtra 0.1.14 2023-08-20 [2] CRAN (R 4.3.1)
## MatrixGenerics 1.14.0 2023-10-24 [2] Bioconductor
## matrixLaplacian 1.0 2016-07-14 [2] CRAN (R 4.3.1)
## MatrixModels 0.5-2 2023-07-10 [2] CRAN (R 4.3.1)
## MatrixQCvis 1.10.0 2023-10-24 [2] Bioconductor
## MatrixRider 1.34.0 2023-10-24 [2] Bioconductor
## matrixStats 1.0.0 2023-06-02 [2] CRAN (R 4.3.1)
## matrixTests 0.2.3 2023-10-05 [2] CRAN (R 4.3.1)
## matter 2.4.0 2023-10-24 [2] Bioconductor
## maxLik 1.5-2 2021-07-26 [2] CRAN (R 4.3.1)
## maxstat 0.7-25 2017-03-02 [2] CRAN (R 4.3.1)
## MBA 0.1-0 2022-11-29 [2] CRAN (R 4.3.1)
## MBAmethyl 1.36.0 2023-10-24 [2] Bioconductor
## MBASED 1.36.0 2023-10-24 [2] Bioconductor
## MBCB 1.56.0 2023-10-24 [2] Bioconductor
## MBECS 1.6.0 2023-10-24 [2] Bioconductor
## mbest 0.6 2018-05-25 [2] CRAN (R 4.3.1)
## mbkmeans 1.18.0 2023-10-24 [2] Bioconductor
## MBmca 1.0.1-3 2021-09-03 [2] CRAN (R 4.3.1)
## mbOmic 1.6.0 2023-10-24 [2] Bioconductor
## mboost 2.9-8 2023-09-06 [2] CRAN (R 4.3.1)
## mBPCR 1.56.0 2023-10-24 [2] Bioconductor
## MBQN 2.14.0 2023-10-24 [2] Bioconductor
## mbQTL 1.2.0 2023-10-24 [2] Bioconductor
## MBttest 1.30.0 2023-10-24 [2] Bioconductor
## MCbiclust 1.26.0 2023-10-24 [2] Bioconductor
## mcbiopi 1.1.6 2018-10-06 [2] CRAN (R 4.3.1)
## MCL 1.0 2015-03-11 [2] CRAN (R 4.3.1)
## mclust 6.0.0 2022-10-31 [2] CRAN (R 4.3.1)
## mclustcomp 0.3.3 2021-06-13 [2] CRAN (R 4.3.1)
## mcmc 0.9-7 2020-03-21 [2] CRAN (R 4.3.1)
## MCMCglmm 2.35 2023-06-30 [2] CRAN (R 4.3.1)
## MCMCpack 1.6-3 2022-04-13 [2] CRAN (R 4.3.1)
## MCMCprecision 0.4.0 2019-12-05 [2] CRAN (R 4.3.1)
## mco 1.15.6 2020-10-09 [2] CRAN (R 4.3.1)
## mCSEA 1.22.0 2023-10-24 [2] Bioconductor
## mCSEAdata 1.21.2 2023-10-24 [2] Bioconductor
## mcsurvdata 1.19.1 2023-10-24 [2] Bioconductor
## mda 0.5-4 2023-06-23 [2] CRAN (R 4.3.1)
## mdendro 2.2.0 2023-10-18 [2] CRAN (R 4.3.1)
## mdp 1.22.0 2023-10-24 [2] Bioconductor
## mdqc 1.64.0 2023-10-24 [2] Bioconductor
## MDTS 1.22.0 2023-10-24 [2] Bioconductor
## MEAL 1.32.0 2023-10-24 [2] Bioconductor
## MeasurementError.cor 1.74.0 2023-10-24 [2] Bioconductor
## MEAT 1.14.0 2023-10-24 [2] Bioconductor
## MEB 1.16.0 2023-10-24 [2] Bioconductor
## MEDIPS 1.54.0 2023-10-24 [2] Bioconductor
## MEDIPSData 1.37.0 2023-10-24 [2] Bioconductor
## MEDME 1.62.0 2023-10-24 [2] Bioconductor
## MEEBOdata 1.39.0 2023-10-24 [2] Bioconductor
## mefa 3.2-8 2021-10-07 [2] CRAN (R 4.3.1)
## megadepth 1.12.0 2023-10-24 [2] Bioconductor
## MEIGOR 1.36.0 2023-10-24 [2] Bioconductor
## Melissa 1.18.0 2023-10-24 [2] Bioconductor
## memes 1.10.0 2023-10-24 [2] Bioconductor
## memoise 2.0.1 2021-11-26 [2] CRAN (R 4.3.1)
## memuse 4.2-3 2023-01-24 [2] CRAN (R 4.3.1)
## MerfishData 1.3.0 2023-10-24 [2] Bioconductor
## Mergeomics 1.30.0 2023-10-24 [2] Bioconductor
## MeSHDbi 1.38.0 2023-10-24 [2] Bioconductor
## meshes 1.28.0 2023-10-24 [2] Bioconductor
## meshr 2.8.0 2023-10-24 [2] Bioconductor
## MesKit 1.12.0 2023-10-24 [2] local
## MESS 0.5.12 2023-08-20 [2] CRAN (R 4.3.1)
## messina 1.38.0 2023-10-24 [2] Bioconductor
## Metab 1.36.0 2023-10-24 [2] Bioconductor
## metabCombiner 1.12.0 2023-10-24 [2] Bioconductor
## metabinR 1.4.0 2023-10-24 [2] Bioconductor
## MetaboAnnotation 1.6.0 2023-10-24 [2] Bioconductor
## MetaboCoreUtils 1.10.0 2023-10-24 [2] Bioconductor
## metaboliteIDmapping 0.99.10 2023-10-25 [2] Bioconductor
## metabolomicsWorkbenchR 1.12.0 2023-10-24 [2] Bioconductor
## metabomxtr 1.36.0 2023-10-24 [2] Bioconductor
## MetaboSignal 1.32.0 2023-10-24 [2] Bioconductor
## metaCCA 1.30.0 2023-10-24 [2] Bioconductor
## MetaCycle 1.2.0 2019-04-18 [2] CRAN (R 4.3.1)
## MetaCyto 1.24.0 2023-10-24 [2] Bioconductor
## metadat 1.2-0 2022-04-06 [2] CRAN (R 4.3.1)
## metafor 4.4-0 2023-09-27 [2] CRAN (R 4.3.1)
## metagene 2.34.0 2023-10-24 [2] Bioconductor
## metagene2 1.18.0 2023-10-24 [2] Bioconductor
## metagenomeSeq 1.44.0 2023-10-24 [2] Bioconductor
## MetaGxBreast 1.21.0 2023-10-24 [2] Bioconductor
## MetaGxOvarian 1.21.0 2023-10-24 [2] Bioconductor
## MetaGxPancreas 1.21.0 2023-10-24 [2] Bioconductor
## metahdep 1.60.0 2023-10-24 [2] Bioconductor
## metaMA 3.1.3 2022-04-12 [2] CRAN (R 4.3.1)
## metaMS 1.38.0 2023-10-24 [2] Bioconductor
## metaMSdata 1.37.0 2023-10-24 [2] Bioconductor
## MetaNeighbor 1.22.0 2023-10-24 [2] Bioconductor
## metap 1.9 2023-10-09 [2] CRAN (R 4.3.1)
## MetaPhOR 1.4.0 2023-10-24 [2] Bioconductor
## metapod 1.10.0 2023-10-24 [2] Bioconductor
## metapone 1.8.0 2023-10-24 [2] Bioconductor
## MetaScope 1.1.4 2023-10-24 [2] Bioconductor
## metaSeq 1.42.0 2023-10-24 [2] Bioconductor
## metaseqR2 1.14.0 2023-10-24 [2] Bioconductor
## MetaVolcanoR 1.16.0 2023-10-24 [2] Bioconductor
## MetBrewer 0.2.0 2022-03-21 [2] CRAN (R 4.3.1)
## MetCirc 1.32.0 2023-10-24 [2] Bioconductor
## methimpute 1.24.0 2023-10-24 [2] Bioconductor
## methInheritSim 1.24.0 2023-10-24 [2] Bioconductor
## methods * 4.3.1 2023-06-20 [3] local
## MethPed 1.30.0 2023-10-24 [2] Bioconductor
## MethReg 1.12.0 2023-10-24 [2] Bioconductor
## methrix 1.16.0 2023-10-24 [2] Bioconductor
## MethTargetedNGS 1.34.0 2023-10-24 [2] Bioconductor
## MethylAid 1.36.0 2023-10-24 [2] Bioconductor
## MethylAidData 1.33.0 2023-10-24 [2] Bioconductor
## methylationArrayAnalysis 1.27.0 2023-10-24 [2] Bioconductor
## methylCC 1.16.0 2023-10-24 [2] Bioconductor
## methylclock 1.8.0 2023-10-24 [2] Bioconductor
## methylclockData 1.9.1 2023-10-24 [2] Bioconductor
## methylGSA 1.20.0 2023-10-24 [2] Bioconductor
## methylInheritance 1.26.0 2023-10-24 [2] Bioconductor
## methylKit 1.28.0 2023-10-24 [2] Bioconductor
## MethylMix 2.32.0 2023-10-24 [2] Bioconductor
## methylMnM 1.40.0 2023-10-24 [2] Bioconductor
## methylPipe 1.36.0 2023-10-24 [2] Bioconductor
## methylscaper 1.10.0 2023-10-24 [2] Bioconductor
## MethylSeekR 1.42.0 2023-10-24 [2] Bioconductor
## MethylSeqData 1.11.0 2023-10-24 [2] Bioconductor
## methylSig 1.14.0 2023-10-24 [2] Bioconductor
## methylumi 2.48.0 2023-10-24 [2] Bioconductor
## MetID 1.20.0 2023-10-24 [2] Bioconductor
## MetNet 1.20.0 2023-10-24 [2] Bioconductor
## metR 0.14.0 2023-03-23 [2] CRAN (R 4.3.1)
## Metrics 0.1.4 2018-07-09 [2] CRAN (R 4.3.1)
## mfa 1.24.0 2023-10-24 [2] Bioconductor
## Mfuzz 2.62.0 2023-10-24 [2] Bioconductor
## mgcv 1.9-0 2023-07-11 [3] CRAN (R 4.3.1)
## MGFM 1.36.0 2023-10-24 [2] Bioconductor
## MGFR 1.28.0 2023-10-24 [2] Bioconductor
## MGLM 0.2.1 2022-04-13 [2] CRAN (R 4.3.1)
## mgsa 1.50.0 2023-10-24 [2] Bioconductor
## mgsub 1.7.3 2021-07-28 [2] CRAN (R 4.3.1)
## mhsmm 0.4.21 2023-08-23 [2] CRAN (R 4.3.1)
## mia 1.10.0 2023-10-24 [2] Bioconductor
## miaSim 1.8.0 2023-10-24 [2] Bioconductor
## miaViz 1.10.0 2023-10-24 [2] Bioconductor
## mice 3.16.0 2023-06-05 [2] CRAN (R 4.3.1)
## miceadds 3.16-18 2023-01-06 [2] CRAN (R 4.3.1)
## MiChip 1.56.0 2023-10-24 [2] Bioconductor
## microbenchmark 1.4.10 2023-04-28 [2] CRAN (R 4.3.1)
## microbiome 1.24.0 2023-10-24 [2] Bioconductor
## MicrobiomeBenchmarkData 1.3.0 2023-10-24 [2] Bioconductor
## microbiomeDASim 1.16.0 2023-10-24 [2] Bioconductor
## microbiomeDataSets 1.9.0 2023-10-24 [2] Bioconductor
## microbiomeExplorer 1.12.0 2023-10-24 [2] Bioconductor
## microbiomeMarker 1.8.0 2023-10-24 [2] Bioconductor
## MicrobiomeProfiler 1.8.0 2023-10-24 [2] Bioconductor
## MicrobiomeStat 1.1 2022-01-24 [2] CRAN (R 4.3.1)
## MicrobiotaProcess 1.14.0 2023-10-24 [2] Bioconductor
## microRNA 1.60.0 2023-10-24 [2] Bioconductor
## microRNAome 1.23.0 2023-10-24 [2] Bioconductor
## microSTASIS 1.2.0 2023-10-24 [2] Bioconductor
## MICSQTL 1.0.0 2023-10-24 [2] Bioconductor
## midasHLA 1.10.0 2023-10-24 [2] Bioconductor
## MIGSAdata 1.25.1 2023-10-24 [2] Bioconductor
## miloR 1.10.0 2023-10-24 [2] Bioconductor
## mimager 1.26.0 2023-10-24 [2] Bioconductor
## mime 0.12 2021-09-28 [2] CRAN (R 4.3.1)
## mina 1.10.0 2023-10-24 [2] Bioconductor
## MineICA 1.42.0 2023-10-24 [2] Bioconductor
## minet 3.60.0 2023-10-24 [2] Bioconductor
## minfi 1.48.0 2023-10-24 [2] Bioconductor
## minfiData 0.47.0 2023-10-24 [2] Bioconductor
## minfiDataEPIC 1.27.0 2023-10-24 [2] Bioconductor
## MinimumDistance 1.46.0 2023-10-24 [2] Bioconductor
## minionSummaryData 1.31.0 2023-10-24 [2] Bioconductor
## miniUI 0.1.1.1 2018-05-18 [2] CRAN (R 4.3.1)
## minpack.lm 1.2-4 2023-09-11 [2] CRAN (R 4.3.1)
## minqa 1.2.6 2023-09-11 [2] CRAN (R 4.3.1)
## MiPP 1.74.0 2023-10-24 [2] Bioconductor
## miQC 1.10.0 2023-10-24 [2] Bioconductor
## MIRA 1.24.0 2023-10-24 [2] Bioconductor
## MiRaGE 1.44.0 2023-10-24 [2] Bioconductor
## mirbase.db 1.2.0 2023-06-20 [2] Bioconductor
## miRBaseConverter 1.26.0 2023-10-24 [2] Bioconductor
## miRBaseVersions.db 1.1.0 2023-06-20 [2] Bioconductor
## miRcomp 1.32.0 2023-10-24 [2] Bioconductor
## miRcompData 1.31.0 2023-10-24 [2] Bioconductor
## mirIntegrator 1.32.0 2023-10-24 [2] Bioconductor
## miRLAB 1.32.0 2023-10-24 [2] Bioconductor
## miRmine 1.24.0 2023-10-24 [2] Bioconductor
## mirna10cdf 2.18.0 2023-06-20 [2] Bioconductor
## miRNAmeConverter 1.30.0 2023-10-24 [2] Bioconductor
## miRNApath 1.62.0 2023-10-24 [2] Bioconductor
## miRNAtap 1.36.0 2023-10-24 [2] Bioconductor
## miRNAtap.db 0.99.10 2023-06-20 [2] Bioconductor
## miRNATarget 1.39.0 2023-10-24 [2] Bioconductor
## miRSM 1.20.0 2023-10-24 [2] Bioconductor
## miRspongeR 2.6.0 2023-10-24 [2] Bioconductor
## mirTarRnaSeq 1.10.0 2023-10-24 [2] Bioconductor
## misc3d 0.9-1 2021-10-07 [2] CRAN (R 4.3.1)
## miscTools 0.6-28 2023-05-03 [2] CRAN (R 4.3.1)
## missForest 1.5 2022-04-14 [2] CRAN (R 4.3.1)
## missMDA 1.18 2020-12-11 [2] CRAN (R 4.3.1)
## missMethyl 1.36.0 2023-10-24 [2] Bioconductor
## missRows 1.22.0 2023-10-24 [2] Bioconductor
## mistyR 1.10.0 2023-10-24 [2] Bioconductor
## mitch 1.14.0 2023-10-24 [2] Bioconductor
## mitml 0.4-5 2023-03-08 [2] CRAN (R 4.3.1)
## mitoClone2 1.8.0 2023-10-24 [2] Bioconductor
## mitools 2.4 2019-04-26 [2] CRAN (R 4.3.1)
## mixOmics 6.26.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## mixsmsn 1.1-10 2021-10-06 [2] CRAN (R 4.3.1)
## mixsqp 0.3-48 2022-11-16 [2] CRAN (R 4.3.1)
## mixtools 2.0.0 2022-12-05 [2] CRAN (R 4.3.1)
## MKdescr 0.8 2022-11-05 [2] CRAN (R 4.3.1)
## MKinfer 1.1 2023-04-17 [2] CRAN (R 4.3.1)
## MKmisc 1.9 2022-11-19 [2] CRAN (R 4.3.1)
## mlapi 0.1.1 2022-04-24 [2] CRAN (R 4.3.1)
## mlbench 2.1-3.1 2023-05-05 [2] CRAN (R 4.3.1)
## MLInterfaces 1.82.0 2023-10-24 [2] Bioconductor
## MLmetrics 1.1.1 2016-05-13 [2] CRAN (R 4.3.1)
## MLP 1.50.0 2023-10-24 [2] Bioconductor
## mlr 2.19.1 2022-09-29 [2] CRAN (R 4.3.1)
## mlr3 0.16.1 2023-06-17 [2] CRAN (R 4.3.1)
## mlr3learners 0.5.6 2023-01-06 [2] CRAN (R 4.3.1)
## mlr3measures 0.5.0 2022-08-05 [2] CRAN (R 4.3.1)
## mlr3misc 0.13.0 2023-09-20 [2] CRAN (R 4.3.1)
## mlr3tuning 0.19.0 2023-06-26 [2] CRAN (R 4.3.1)
## mlrMBO 1.1.5.1 2022-07-04 [2] CRAN (R 4.3.1)
## MLSeq 2.20.0 2023-10-24 [2] Bioconductor
## mltools 0.3.5 2018-05-12 [2] CRAN (R 4.3.1)
## mmand 1.6.3 2023-02-07 [2] CRAN (R 4.3.1)
## MMAPPR2 1.16.0 2023-10-24 [2] Bioconductor
## MMAPPR2data 1.15.0 2023-10-24 [2] Bioconductor
## MMDiff2 1.30.0 2023-10-24 [2] Bioconductor
## MMDiffBamSubset 1.37.0 2023-10-24 [2] Bioconductor
## MMUPHin 1.16.0 2023-10-24 [2] Bioconductor
## mnem 1.18.0 2023-10-24 [2] Bioconductor
## mnormt 2.1.1 2022-09-26 [2] CRAN (R 4.3.1)
## moanin 1.10.0 2023-10-24 [2] Bioconductor
## MobilityTransformR 1.6.0 2023-10-24 [2] Bioconductor
## mockery 0.4.4 2023-09-26 [2] CRAN (R 4.3.1)
## MODA 1.28.0 2023-10-24 [2] Bioconductor
## ModCon 1.10.0 2023-10-24 [2] Bioconductor
## modeest 2.4.0 2019-11-18 [2] CRAN (R 4.3.1)
## ModelMetrics 1.2.2.2 2020-03-17 [2] CRAN (R 4.3.1)
## modelr 0.1.11 2023-03-22 [2] CRAN (R 4.3.1)
## modeltools 0.2-23 2020-03-05 [2] CRAN (R 4.3.1)
## Modstrings 1.18.0 2023-10-24 [2] Bioconductor
## MOFA2 1.12.0 2023-10-24 [2] Bioconductor
## MOFAdata 1.17.1 2023-10-24 [2] Bioconductor
## MOGAMUN 1.12.0 2023-10-24 [2] Bioconductor
## mogsa 1.36.0 2023-10-24 [2] Bioconductor
## MoleculeExperiment 1.2.0 2023-10-24 [2] Bioconductor
## MOMA 1.14.0 2023-10-24 [2] Bioconductor
## moments 0.14.1 2022-05-02 [2] CRAN (R 4.3.1)
## monaLisa 1.8.0 2023-10-24 [2] Bioconductor
## monocle 2.30.0 2023-10-24 [2] Bioconductor
## Moonlight2R 1.0.0 2023-10-24 [2] Bioconductor
## MoonlightR 1.28.0 2023-10-24 [2] Bioconductor
## mosaicCore 0.9.2.1 2022-09-22 [2] CRAN (R 4.3.1)
## mosaics 2.40.0 2023-10-24 [2] Bioconductor
## mosaicsExample 1.39.0 2023-10-24 [2] Bioconductor
## mosbi 1.8.0 2023-10-24 [2] Bioconductor
## MOSim 1.16.0 2023-10-24 [2] Bioconductor
## Motif2Site 1.6.0 2023-10-24 [2] Bioconductor
## motifbreakR 2.16.0 2023-10-24 [2] Bioconductor
## motifcounter 1.26.0 2023-10-24 [2] Bioconductor
## MotifDb 1.44.0 2023-10-24 [2] Bioconductor
## motifmatchr 1.24.0 2023-10-24 [2] Bioconductor
## motifStack 1.46.0 2023-10-24 [2] Bioconductor
## mouse4302.db 3.13.0 2023-06-20 [2] Bioconductor
## mouse4302barcodevecs 1.39.0 2023-10-24 [2] Bioconductor
## mouse4302cdf 2.18.0 2023-06-20 [2] Bioconductor
## mouse4302frmavecs 1.5.0 2023-06-20 [2] Bioconductor
## MouseFM 1.12.0 2023-10-24 [2] Bioconductor
## MouseGastrulationData 1.15.0 2023-10-24 [2] Bioconductor
## MouseThymusAgeing 1.9.0 2023-10-24 [2] Bioconductor
## MPFE 1.38.0 2023-10-24 [2] Bioconductor
## mpm 1.0-23 2022-04-01 [2] CRAN (R 4.3.1)
## MPO.db 0.99.7 2023-10-25 [2] Bioconductor
## mpra 1.24.0 2023-10-24 [2] Bioconductor
## MPRAnalyze 1.20.0 2023-10-24 [2] Bioconductor
## MQmetrics 1.10.0 2023-10-24 [2] Bioconductor
## mrfDepth 1.0.15 2023-10-06 [2] CRAN (R 4.3.1)
## mRMRe 2.1.2.1 2023-04-25 [2] CRAN (R 4.3.1)
## msa 1.34.0 2023-10-24 [2] Bioconductor
## MSA2dist 1.6.0 2023-10-24 [2] Bioconductor
## MsBackendMassbank 1.10.0 2023-10-24 [2] Bioconductor
## MsBackendMgf 1.10.0 2023-10-24 [2] Bioconductor
## MsBackendMsp 1.6.0 2023-10-24 [2] Bioconductor
## MsBackendRawFileReader 1.8.0 2023-10-24 [2] Bioconductor
## MsBackendSql 1.2.0 2023-10-24 [2] Bioconductor
## MsCoreUtils 1.14.0 2023-10-24 [2] Bioconductor
## msd16s 1.21.0 2023-10-24 [2] Bioconductor
## msdata 0.41.0 2023-10-24 [2] Bioconductor
## MsDataHub 1.2.0 2023-10-24 [2] Bioconductor
## msentropy 0.1.4 2023-08-07 [2] CRAN (R 4.3.1)
## MsExperiment 1.4.0 2023-10-24 [2] Bioconductor
## MsFeatures 1.10.0 2023-10-24 [2] Bioconductor
## msgbsR 1.26.0 2023-10-24 [2] Bioconductor
## msgps 1.3.5 2022-10-20 [2] CRAN (R 4.3.1)
## msigdb 1.9.2 2023-10-24 [2] Bioconductor
## msigdbr 7.5.1 2022-03-30 [2] CRAN (R 4.3.1)
## msImpute 1.12.0 2023-10-24 [2] Bioconductor
## mslp 1.4.0 2023-10-24 [2] Bioconductor
## msm 1.7 2022-11-28 [2] CRAN (R 4.3.1)
## MSMB 1.19.0 2023-10-24 [2] Bioconductor
## msmsEDA 1.40.0 2023-10-24 [2] Bioconductor
## msmsTests 1.40.0 2023-10-24 [2] Bioconductor
## MSnbase 2.28.0 2023-10-24 [2] Bioconductor
## MSnID 1.36.0 2023-10-24 [2] Bioconductor
## MSPrep 1.12.0 2023-10-24 [2] Bioconductor
## msPurity 1.28.0 2023-10-24 [2] Bioconductor
## msPurityData 1.29.0 2023-10-24 [2] Bioconductor
## MSQC 1.1.0 2022-05-01 [2] CRAN (R 4.3.1)
## msqc1 1.29.0 2023-10-24 [2] Bioconductor
## msqrob2 1.10.0 2023-10-24 [2] Bioconductor
## MsQuality 1.2.0 2023-10-24 [2] Bioconductor
## MSstats 4.10.0 2023-10-24 [2] Bioconductor
## MSstatsBig 1.0.0 2023-10-24 [2] Bioconductor
## MSstatsConvert 1.12.0 2023-10-24 [2] Bioconductor
## MSstatsLiP 1.8.0 2023-10-24 [2] Bioconductor
## MSstatsLOBD 1.10.0 2023-10-24 [2] Bioconductor
## MSstatsPTM 2.4.0 2023-10-24 [2] Bioconductor
## MSstatsQC 2.20.0 2023-10-24 [2] Bioconductor
## MSstatsQCgui 1.22.0 2023-10-24 [2] Bioconductor
## MSstatsSampleSize 1.16.0 2023-10-24 [2] Bioconductor
## MSstatsShiny 1.4.0 2023-10-24 [2] Bioconductor
## MSstatsTMT 2.10.0 2023-10-24 [2] Bioconductor
## mstate 0.3.2 2021-11-08 [2] CRAN (R 4.3.1)
## mtbls2 1.31.0 2023-10-24 [2] Bioconductor
## MuData 1.6.0 2023-10-24 [2] Bioconductor
## MUGAExampleData 1.21.0 2023-10-24 [2] Bioconductor
## Mulcom 1.52.0 2023-10-24 [2] Bioconductor
## multcomp 1.4-25 2023-06-20 [2] CRAN (R 4.3.1)
## multcompView 0.1-9 2023-04-09 [2] CRAN (R 4.3.1)
## MultiAssayExperiment 1.28.0 2023-10-24 [2] Bioconductor
## MultiBaC 1.12.0 2023-10-24 [2] Bioconductor
## multiClust 1.32.0 2023-10-24 [2] Bioconductor
## multicool 0.1-12 2021-06-29 [2] CRAN (R 4.3.1)
## multicrispr 1.12.0 2023-10-24 [2] Bioconductor
## MultiDataSet 1.30.0 2023-10-24 [2] Bioconductor
## multiGSEA 1.12.0 2023-10-24 [2] Bioconductor
## multiHiCcompare 1.20.0 2023-10-24 [2] Bioconductor
## MultiMed 2.24.0 2023-10-24 [2] Bioconductor
## multiMiR 1.24.0 2023-10-24 [2] Bioconductor
## MultimodalExperiment 1.2.0 2023-10-24 [2] Bioconductor
## multiOmicsViz 1.26.0 2023-10-24 [2] Bioconductor
## multipanelfigure 2.1.2 2020-03-04 [2] CRAN (R 4.3.1)
## MultiRNAflow 1.0.0 2023-10-24 [2] Bioconductor
## multiscan 1.62.0 2023-10-24 [2] Bioconductor
## multiSight 1.10.0 2023-10-24 [2] Bioconductor
## multiWGCNA 1.0.0 2023-10-24 [2] Bioconductor
## multiWGCNAdata 0.99.2 2023-10-24 [2] Bioconductor
## multtest 2.58.0 2023-10-24 [2] Bioconductor
## MuMIn 1.47.5 2023-03-22 [2] CRAN (R 4.3.1)
## mumosa 1.10.0 2023-10-24 [2] Bioconductor
## MungeSumstats 1.10.0 2023-10-24 [2] Bioconductor
## munsell 0.5.0 2018-06-12 [2] CRAN (R 4.3.1)
## Mus.musculus 1.3.1 2023-06-20 [2] Bioconductor
## muscat 1.16.0 2023-10-24 [2] Bioconductor
## muscData 1.15.0 2023-10-24 [2] Bioconductor
## muscle 3.44.0 2023-10-24 [2] Bioconductor
## musicatk 1.12.0 2023-10-24 [2] Bioconductor
## MutationalPatterns 3.12.0 2023-10-24 [2] Bioconductor
## mutoss 0.1-13 2023-03-14 [2] CRAN (R 4.3.1)
## MVCClass 1.76.0 2023-10-24 [2] Bioconductor
## mvnfast 0.2.8 2023-02-23 [2] CRAN (R 4.3.1)
## mvoutData 1.37.0 2023-10-24 [2] Bioconductor
## mvoutlier 2.1.1 2021-07-30 [2] CRAN (R 4.3.1)
## mvtnorm 1.2-3 2023-08-25 [2] CRAN (R 4.3.1)
## MWASTools 1.26.0 2023-10-24 [2] Bioconductor
## mwcsr 0.1.7 2023-05-16 [2] CRAN (R 4.3.1)
## mygene 1.38.0 2023-10-24 [2] Bioconductor
## myvariant 1.32.0 2023-10-24 [2] Bioconductor
## mzID 1.40.0 2023-10-24 [2] Bioconductor
## mzR 2.36.0 2023-10-24 [2] Bioconductor
## nabor 0.5.0 2018-07-11 [2] CRAN (R 4.3.1)
## NADA 1.6-1.1 2020-03-22 [2] CRAN (R 4.3.1)
## NADfinder 1.26.0 2023-10-24 [2] Bioconductor
## naivebayes 0.9.7 2020-03-08 [2] CRAN (R 4.3.1)
## naniar 1.0.0 2023-02-02 [2] CRAN (R 4.3.1)
## NanoMethViz 2.8.0 2023-10-24 [2] Bioconductor
## NanoporeRNASeq 1.11.0 2023-10-24 [2] Bioconductor
## NanoStringDiff 1.32.0 2023-10-24 [2] Bioconductor
## NanoStringNCTools 1.10.0 2023-10-24 [2] Bioconductor
## nanotatoR 1.18.0 2023-10-24 [2] Bioconductor
## nanotime 0.3.7 2022-10-24 [2] CRAN (R 4.3.1)
## NanoTube 1.8.0 2023-10-24 [2] Bioconductor
## nanotubes 1.17.0 2023-10-24 [2] Bioconductor
## nat 1.8.23 2023-08-25 [2] CRAN (R 4.3.1)
## nat.utils 0.6.1 2023-06-07 [2] CRAN (R 4.3.1)
## natserv 1.0.0 2020-05-16 [2] CRAN (R 4.3.1)
## naturalsort 0.1.3 2016-08-30 [2] CRAN (R 4.3.1)
## NBAMSeq 1.18.0 2023-10-24 [2] Bioconductor
## NbClust 3.0.1 2022-05-02 [2] CRAN (R 4.3.1)
## NBPSeq 0.3.1 2022-06-09 [2] CRAN (R 4.3.1)
## ncbit 2013.03.29.1 2022-06-24 [2] CRAN (R 4.3.1)
## ncdf4 1.21 2023-01-07 [2] CRAN (R 4.3.1)
## ncdfFlow 2.48.0 2023-10-24 [2] Bioconductor
## ncGTW 1.16.0 2023-10-24 [2] Bioconductor
## NCIgraph 1.50.0 2023-10-24 [2] Bioconductor
## NCIgraphData 1.37.0 2023-10-24 [2] Bioconductor
## NCmisc 1.2.0 2022-10-17 [2] CRAN (R 4.3.1)
## ncRNAtools 1.12.0 2023-10-24 [2] Bioconductor
## ndexr 1.24.0 2023-10-24 [2] Bioconductor
## nearBynding 1.12.0 2023-10-24 [2] Bioconductor
## Nebulosa 1.12.0 2023-10-24 [2] Bioconductor
## NeighborNet 1.20.0 2023-10-24 [2] Bioconductor
## nempi 1.10.0 2023-10-24 [2] Bioconductor
## neo4r 0.1.1 2019-02-15 [2] CRAN (R 4.3.1)
## NestLink 1.17.0 2023-10-24 [2] Bioconductor
## NetActivity 1.4.0 2023-10-24 [2] Bioconductor
## NetActivityData 1.3.0 2023-10-24 [2] Bioconductor
## netbiov 1.36.0 2023-10-24 [2] Bioconductor
## netboost 2.10.0 2023-10-24 [2] Bioconductor
## netDx 1.14.0 2023-10-24 [2] Bioconductor
## nethet 1.34.0 2023-10-24 [2] Bioconductor
## netOmics 1.8.0 2023-10-24 [2] Bioconductor
## NetPathMiner 1.38.0 2023-10-24 [2] Bioconductor
## netprioR 1.28.0 2023-10-24 [2] Bioconductor
## NetRep 1.2.7 2023-08-19 [2] CRAN (R 4.3.1)
## netresponse 1.62.0 2023-10-24 [2] Bioconductor
## NetSAM 1.42.0 2023-10-24 [2] local
## netSmooth 1.22.0 2023-10-24 [2] Bioconductor
## network 1.18.1 2023-01-24 [2] CRAN (R 4.3.1)
## networkD3 0.4 2017-03-18 [2] CRAN (R 4.3.1)
## netZooR 1.6.0 2023-10-24 [2] Bioconductor
## NeuCA 1.8.0 2023-10-24 [2] Bioconductor
## Neve2006 0.39.0 2023-10-24 [2] Bioconductor
## NewWave 1.12.0 2023-10-24 [2] Bioconductor
## NGLVieweR 1.3.1 2021-06-01 [2] CRAN (R 4.3.1)
## NGScopyData 1.21.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## ngsReports 2.4.0 2023-10-24 [2] Bioconductor
## NHPoisson 3.3 2020-02-19 [2] CRAN (R 4.3.1)
## nipals 0.8 2021-09-15 [2] CRAN (R 4.3.1)
## nipalsMCIA 1.0.0 2023-10-24 [2] Bioconductor
## NISTunits 1.0.1 2016-08-11 [2] CRAN (R 4.3.1)
## nlcv 0.3.5 2018-06-29 [2] CRAN (R 4.3.1)
## nleqslv 3.3.4 2023-01-14 [2] CRAN (R 4.3.1)
## nlme 3.1-163 2023-08-09 [3] CRAN (R 4.3.1)
## nloptr 2.0.3 2022-05-26 [2] CRAN (R 4.3.1)
## NLP 0.2-1 2020-10-14 [2] CRAN (R 4.3.1)
## nls2 0.3-3 2022-05-02 [2] CRAN (R 4.3.1)
## NMF 0.26 2023-03-20 [2] CRAN (R 4.3.1)
## NMFN 2.0.1 2022-06-23 [2] CRAN (R 4.3.1)
## NMI 2.0 2016-08-20 [2] CRAN (R 4.3.1)
## nnet 7.3-19 2023-05-03 [3] CRAN (R 4.3.1)
## nnlasso 0.3 2016-03-10 [2] CRAN (R 4.3.1)
## nnls 1.5 2023-09-11 [2] CRAN (R 4.3.1)
## nnNorm 2.66.0 2023-10-24 [2] Bioconductor
## nnSVG 1.6.0 2023-10-24 [2] Bioconductor
## nnTensor 1.2.0 2023-06-22 [2] CRAN (R 4.3.1)
## NOISeq 2.46.0 2023-10-24 [2] Bioconductor
## nondetects 2.32.0 2023-10-24 [2] Bioconductor
## nor1mix 1.3-0 2019-06-13 [2] CRAN (R 4.3.1)
## NoRCE 1.14.0 2023-10-24 [2] Bioconductor
## norm 1.0-11.1 2023-06-18 [2] CRAN (R 4.3.1)
## norm2 2.0.4 2021-02-12 [2] CRAN (R 4.3.1)
## normalize450K 1.30.0 2023-10-24 [2] Bioconductor
## NormalyzerDE 1.20.0 2023-10-24 [2] Bioconductor
## NormqPCR 1.48.0 2023-10-24 [2] Bioconductor
## normr 1.28.0 2023-10-24 [2] Bioconductor
## nortest 1.0-4 2015-07-30 [2] CRAN (R 4.3.1)
## Nozzle.R1 1.1-1.1 2022-06-23 [2] CRAN (R 4.3.1)
## np 0.60-17 2023-03-13 [2] CRAN (R 4.3.1)
## NPARC 1.14.0 2023-10-24 [2] Bioconductor
## npGSEA 1.38.0 2023-10-24 [2] Bioconductor
## nsga2R 1.1 2022-05-23 [2] CRAN (R 4.3.1)
## nsprcomp 0.5.1-2 2018-06-05 [2] CRAN (R 4.3.1)
## NTW 1.52.0 2023-10-24 [2] Bioconductor
## nucleoSim 1.30.0 2023-10-24 [2] Bioconductor
## nucleR 2.34.0 2023-10-24 [2] Bioconductor
## nuCpos 1.20.0 2023-10-24 [2] Bioconductor
## nullranges 1.8.0 2023-10-24 [2] Bioconductor
## nullrangesData 1.7.0 2023-10-24 [2] Bioconductor
## numbers 0.8-5 2022-11-23 [2] CRAN (R 4.3.1)
## numDeriv 2016.8-1.1 2019-06-06 [2] CRAN (R 4.3.1)
## NuPoP 2.10.0 2023-10-24 [2] Bioconductor
## NxtIRFdata 1.7.0 2023-10-24 [2] Bioconductor
## oaqc 1.0 2017-11-14 [2] CRAN (R 4.3.1)
## objectProperties 0.6.8 2022-05-02 [2] CRAN (R 4.3.1)
## objectSignals 0.10.3 2022-04-05 [2] CRAN (R 4.3.1)
## ObMiTi 1.9.0 2023-10-24 [2] Bioconductor
## occugene 1.62.0 2023-10-24 [2] Bioconductor
## OCplus 1.76.0 2023-10-24 [2] Bioconductor
## oct4 1.17.0 2023-10-24 [2] Bioconductor
## octad 1.4.0 2023-10-24 [2] Bioconductor
## octad.db 1.3.0 2023-10-24 [2] Bioconductor
## odseq 1.30.0 2023-10-24 [2] Bioconductor
## officer 0.6.3 2023-10-22 [2] CRAN (R 4.3.1)
## OGRE 1.6.0 2023-10-24 [2] Bioconductor
## oligo 1.66.0 2023-10-24 [2] Bioconductor
## oligoClasses 1.64.0 2023-10-24 [2] Bioconductor
## oligoData 1.8.0 2023-06-20 [2] Bioconductor
## OLIN 1.80.0 2023-10-24 [2] Bioconductor
## OLINgui 1.76.0 2023-10-24 [2] Bioconductor
## omada 1.4.0 2023-10-24 [2] Bioconductor
## OmaDB 2.18.0 2023-10-24 [2] Bioconductor
## omicade4 1.42.0 2023-10-24 [2] Bioconductor
## OmicCircos 1.40.0 2023-10-24 [2] Bioconductor
## omicplotR 1.22.0 2023-10-24 [2] Bioconductor
## omicRexposome 1.24.0 2023-10-24 [2] Bioconductor
## OMICsPCA 1.20.0 2023-10-24 [2] Bioconductor
## OMICsPCAdata 1.19.0 2023-10-24 [2] Bioconductor
## omicsPrint 1.22.0 2023-10-24 [2] Bioconductor
## omicsViewer 1.6.0 2023-10-24 [2] Bioconductor
## Omixer 1.12.0 2023-10-24 [2] Bioconductor
## OmnipathR 3.10.0 2023-10-24 [2] Bioconductor
## ompBAM 1.6.0 2023-10-24 [2] Bioconductor
## OnassisJavaLibs 1.23.0 2023-10-24 [2] Bioconductor
## oncomix 1.24.0 2023-10-24 [2] Bioconductor
## oncoscanR 1.4.0 2023-10-24 [2] Bioconductor
## OncoScore 1.30.0 2023-10-24 [2] Bioconductor
## OncoSimulR 4.4.0 2023-10-24 [2] Bioconductor
## Oncotree 0.3.5 2023-09-27 [2] CRAN (R 4.3.1)
## oneSENSE 1.24.0 2023-10-24 [2] Bioconductor
## onlineFDR 2.10.0 2023-10-24 [2] Bioconductor
## ontologyIndex 2.11 2023-05-30 [2] CRAN (R 4.3.1)
## ontologyPlot 1.6 2021-02-10 [2] CRAN (R 4.3.1)
## ontoProc 1.24.0 2023-10-24 [2] Bioconductor
## ontoProcData 0.99.9904 2023-10-25 [2] Bioconductor
## openair 2.18-0 2023-10-09 [2] CRAN (R 4.3.1)
## opencpu 2.2.11 2023-08-07 [2] CRAN (R 4.3.1)
## openCyto 2.14.0 2023-10-24 [2] Bioconductor
## openPrimeR 1.24.0 2023-10-24 [2] Bioconductor
## openPrimeRui 1.24.0 2023-10-24 [2] Bioconductor
## openssl 2.1.1 2023-09-25 [2] CRAN (R 4.3.1)
## OpenStats 1.14.0 2023-10-24 [2] Bioconductor
## openxlsx 4.2.5.2 2023-02-06 [2] CRAN (R 4.3.1)
## operator.tools 1.6.3 2017-02-28 [2] CRAN (R 4.3.1)
## oposSOM 2.20.0 2023-10-24 [2] Bioconductor
## oppar 1.30.0 2023-10-24 [2] Bioconductor
## oppti 1.16.0 2023-10-24 [2] Bioconductor
## optextras 2019-12.4 2019-12-20 [2] CRAN (R 4.3.1)
## optimalFlow 1.14.0 2023-10-24 [2] Bioconductor
## optimalFlowData 1.13.0 2023-10-24 [2] Bioconductor
## optimParallel 1.0-2 2021-02-11 [2] CRAN (R 4.3.1)
## optimr 2019-12.16 2019-12-17 [2] CRAN (R 4.3.1)
## optimx 2023-10.21 2023-10-24 [2] CRAN (R 4.3.1)
## optparse 1.7.3 2022-07-20 [2] CRAN (R 4.3.1)
## OPWeight 1.24.0 2023-10-24 [2] Bioconductor
## OrderedList 1.74.0 2023-10-24 [2] Bioconductor
## ordinal 2022.11-16 2022-11-16 [2] CRAN (R 4.3.1)
## ore 1.7.3.1 2023-01-16 [2] CRAN (R 4.3.1)
## ORFhunteR 1.10.0 2023-10-24 [2] Bioconductor
## ORFik 1.22.0 2023-10-24 [2] Bioconductor
## org.Ag.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.At.tair.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Bt.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Ce.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Cf.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Dm.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Dr.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.EcK12.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.EcSakai.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Gg.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Hs.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Mm.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Mmu.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Mxanthus.db 1.0.27 2023-10-25 [2] Bioconductor
## org.Pt.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Rn.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Sc.sgd.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Ss.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## org.Xl.eg.db 3.18.0 2023-09-21 [2] Bioconductor
## Organism.dplyr 1.30.0 2023-10-24 [2] Bioconductor
## OrganismDbi 1.44.0 2023-10-24 [2] Bioconductor
## OrgMassSpecR 0.5-3 2017-08-13 [2] CRAN (R 4.3.1)
## origami 1.0.7 2022-10-19 [2] CRAN (R 4.3.1)
## orthogene 1.8.0 2023-10-24 [2] Bioconductor
## orthos 1.0.0 2023-10-24 [2] Bioconductor
## orthosData 0.99.4 2023-10-24 [2] Bioconductor
## OSAT 1.50.0 2023-10-24 [2] Bioconductor
## OSCA 1.12.0 2023-10-25 [2] Bioconductor
## OSCA.advanced 1.10.0 2023-10-25 [2] Bioconductor
## OSCA.basic 1.10.0 2023-10-25 [2] Bioconductor
## OSCA.intro 1.10.0 2023-10-25 [2] Bioconductor
## OSCA.multisample 1.10.0 2023-10-25 [2] Bioconductor
## OSCA.workflows 1.10.0 2023-10-25 [2] Bioconductor
## Oscope 1.32.0 2023-10-24 [2] Bioconductor
## osfr 0.2.9 2022-09-25 [2] CRAN (R 4.3.1)
## osqp 0.6.3.2 2023-10-20 [2] CRAN (R 4.3.1)
## OTUbase 1.52.0 2023-10-24 [2] Bioconductor
## outliers 0.15 2022-03-26 [2] CRAN (R 4.3.1)
## OUTRIDER 1.20.0 2023-10-24 [2] Bioconductor
## OutSplice 1.2.0 2023-10-24 [2] Bioconductor
## OVESEG 1.18.0 2023-10-24 [2] Bioconductor
## PAA 1.36.0 2023-10-24 [2] Bioconductor
## packFinder 1.14.0 2023-10-24 [2] Bioconductor
## packrat 0.9.2 2023-09-05 [2] CRAN (R 4.3.1)
## padma 1.12.0 2023-10-24 [2] Bioconductor
## PADOG 1.44.0 2023-10-24 [2] Bioconductor
## pageRank 1.12.0 2023-10-24 [2] Bioconductor
## paintmap 1.0 2016-08-31 [2] CRAN (R 4.3.1)
## PAIRADISE 1.18.0 2023-10-24 [2] Bioconductor
## paircompviz 1.40.0 2023-10-24 [2] Bioconductor
## PairedData 1.1.1 2018-06-02 [2] CRAN (R 4.3.1)
## pairedGSEA 1.2.0 2023-10-24 [2] Bioconductor
## pairkat 1.8.0 2023-10-24 [2] Bioconductor
## pairsD3 0.1.3 2022-06-06 [2] CRAN (R 4.3.1)
## paletteer 1.5.0 2022-10-19 [2] CRAN (R 4.3.1)
## palmerpenguins 0.1.1 2022-08-15 [2] CRAN (R 4.3.1)
## pals 1.8 2023-08-23 [2] CRAN (R 4.3.1)
## pamr 1.56.1 2019-04-22 [2] CRAN (R 4.3.1)
## pan 1.9 2023-08-21 [2] CRAN (R 4.3.1)
## pandaR 1.34.0 2023-10-24 [2] Bioconductor
## pander 0.6.5 2022-03-18 [2] CRAN (R 4.3.1)
## panelcn.mops 1.24.0 2023-10-24 [2] Bioconductor
## PanomiR 1.6.0 2023-10-24 [2] Bioconductor
## panp 1.72.0 2023-10-24 [2] Bioconductor
## PANR 1.48.0 2023-10-24 [2] Bioconductor
## PANTHER.db 1.0.12 2023-10-25 [2] Bioconductor
## PanViz 1.4.0 2023-10-24 [2] Bioconductor
## paradox 0.11.1 2023-03-17 [2] CRAN (R 4.3.1)
## parallel 4.3.1 2023-06-20 [3] local
## parallelDist 0.2.6 2022-02-03 [2] CRAN (R 4.3.1)
## ParallelLogger 3.3.0 2023-08-22 [2] CRAN (R 4.3.1)
## parallelly 1.36.0 2023-05-26 [2] CRAN (R 4.3.1)
## parallelMap 1.5.1 2021-06-28 [2] CRAN (R 4.3.1)
## parameters 0.21.2 2023-09-16 [2] CRAN (R 4.3.1)
## ParamHelpers 1.14.1 2022-07-04 [2] CRAN (R 4.3.1)
## parathyroidSE 1.39.0 2023-10-24 [2] Bioconductor
## pareg 1.6.0 2023-10-24 [2] Bioconductor
## parglms 1.34.0 2023-10-24 [2] local
## parmigene 1.1.0 2020-08-03 [2] CRAN (R 4.3.1)
## parody 1.60.0 2023-10-24 [2] Bioconductor
## ParquetDataFrame 0.1.0 2023-10-11 [2] Github (LTLA/ParquetDataFrame@5685a62)
## parsedate 1.3.1 2022-10-27 [2] CRAN (R 4.3.1)
## partCNV 1.0.0 2023-10-24 [2] Bioconductor
## party 1.3-13 2023-03-17 [2] CRAN (R 4.3.1)
## partykit 1.2-20 2023-04-14 [2] CRAN (R 4.3.1)
## pasilla 1.29.1 2023-10-24 [2] Bioconductor
## pasillaBamSubset 0.39.0 2023-10-24 [2] Bioconductor
## PasillaTranscriptExpr 1.29.0 2023-10-24 [2] Bioconductor
## PAST 1.18.0 2023-10-24 [2] Bioconductor
## pastecs 1.3.21 2018-03-15 [2] CRAN (R 4.3.1)
## patchwork 1.1.3 2023-08-14 [2] CRAN (R 4.3.1)
## Path2PPI 1.32.0 2023-10-24 [2] Bioconductor
## pathifier 1.40.0 2023-10-24 [2] Bioconductor
## PathNet 1.42.0 2023-10-24 [2] Bioconductor
## PathNetData 1.37.1 2023-10-24 [2] Bioconductor
## PathoStat 1.28.0 2023-10-24 [2] Bioconductor
## pathRender 1.70.0 2023-10-24 [2] Bioconductor
## pathVar 1.32.0 2023-10-24 [2] Bioconductor
## pathview 1.42.0 2023-10-24 [2] Bioconductor
## pathwayPCA 1.18.0 2023-10-24 [2] Bioconductor
## patrick 0.2.0 2022-10-13 [2] CRAN (R 4.3.1)
## paws.common 0.6.2 2023-10-13 [2] CRAN (R 4.3.1)
## paws.storage 0.4.0 2023-09-11 [2] CRAN (R 4.3.1)
## paxtoolsr 1.36.0 2023-10-24 [2] Bioconductor
## pbapply 1.7-2 2023-06-27 [2] CRAN (R 4.3.1)
## pbdZMQ 0.3-10 2023-09-05 [2] CRAN (R 4.3.1)
## pbivnorm 0.6.0 2015-01-23 [2] CRAN (R 4.3.1)
## pbkrtest 0.5.2 2023-01-19 [2] CRAN (R 4.3.1)
## pbmcapply 1.5.1 2022-04-28 [2] CRAN (R 4.3.1)
## pcaExplorer 2.28.0 2023-10-24 [2] Bioconductor
## pcalg 2.7-9 2023-09-26 [2] CRAN (R 4.3.1)
## pcaMethods 1.94.0 2023-10-24 [2] Bioconductor
## PCAN 1.30.0 2023-10-24 [2] Bioconductor
## pcaPP 2.0-3 2022-10-24 [2] CRAN (R 4.3.1)
## PCAtools 2.14.0 2023-10-24 [2] Bioconductor
## PCHiCdata 1.29.0 2023-10-24 [2] Bioconductor
## PCRedux 1.1-2 2022-05-11 [2] CRAN (R 4.3.1)
## pcxn 2.24.0 2023-10-24 [2] Bioconductor
## pcxnData 2.23.0 2023-10-24 [2] Bioconductor
## pd.atdschip.tiling 0.39.0 2023-10-24 [2] Bioconductor
## pd.genomewidesnp.5 3.14.1 2023-06-20 [2] Bioconductor
## pd.genomewidesnp.6 3.14.1 2023-06-20 [2] Bioconductor
## pd.hg.u95a 3.12.0 2023-06-20 [2] Bioconductor
## pd.hg.u95av2 3.12.0 2023-06-20 [2] Bioconductor
## pd.hg18.60mer.expr 3.12.0 2023-06-20 [2] Bioconductor
## pd.huex.1.0.st.v2 3.14.1 2023-06-20 [2] Bioconductor
## pd.hugene.1.0.st.v1 3.14.1 2023-06-20 [2] Bioconductor
## pd.mapping250k.nsp 3.12.0 2023-06-20 [2] Bioconductor
## pd.mapping250k.sty 3.12.0 2023-06-20 [2] Bioconductor
## pd.mapping50k.hind240 3.12.0 2023-06-20 [2] Bioconductor
## pd.mapping50k.xba240 3.12.0 2023-06-20 [2] Bioconductor
## PDATK 1.10.0 2023-10-24 [2] Bioconductor
## pdfCluster 1.0-4 2022-12-02 [2] CRAN (R 4.3.1)
## pdftools 3.4.0 2023-09-25 [2] CRAN (R 4.3.1)
## pdInfoBuilder 1.66.0 2023-10-24 [2] Bioconductor
## pdist 1.2.1 2022-05-02 [2] CRAN (R 4.3.1)
## PeacoQC 1.12.0 2023-10-24 [2] Bioconductor
## peakPantheR 1.16.0 2023-10-24 [2] Bioconductor
## PECA 1.38.0 2023-10-24 [2] Bioconductor
## peco 1.14.0 2023-10-24 [2] Bioconductor
## penalized 0.9-52 2022-04-23 [2] CRAN (R 4.3.1)
## pengls 1.8.0 2023-10-24 [2] Bioconductor
## pepDat 1.21.0 2023-10-24 [2] Bioconductor
## PepsNMR 1.20.0 2023-10-24 [2] Bioconductor
## PepsNMRData 1.19.0 2023-10-24 [2] Bioconductor
## pepStat 1.36.0 2023-10-24 [2] Bioconductor
## Peptides 2.4.5 2023-05-10 [2] CRAN (R 4.3.1)
## pepXMLTab 1.36.0 2023-10-24 [2] Bioconductor
## PERFect 1.16.0 2023-10-24 [2] Bioconductor
## PerfMeas 1.2.5 2022-09-14 [2] CRAN (R 4.3.1)
## PerformanceAnalytics 2.0.4 2020-02-06 [2] CRAN (R 4.3.1)
## periodicDNA 1.12.0 2023-10-24 [2] Bioconductor
## permute 0.9-7 2022-01-27 [2] CRAN (R 4.3.1)
## PFAM.db 3.18.0 2023-09-21 [2] Bioconductor
## pfamAnalyzeR 1.2.0 2023-10-24 [2] Bioconductor
## PFP 1.10.0 2023-10-24 [2] Bioconductor
## pgca 1.26.0 2023-10-24 [2] Bioconductor
## phangorn 2.11.1 2023-01-23 [2] CRAN (R 4.3.1)
## phantasus 1.22.0 2023-10-24 [2] Bioconductor
## phantasusLite 1.0.0 2023-10-24 [2] Bioconductor
## PharmacoGx 3.6.0 2023-10-24 [2] Bioconductor
## phastCons100way.UCSC.hg19 3.7.2 2023-06-20 [2] Bioconductor
## phastCons100way.UCSC.hg38 3.7.1 2023-06-20 [2] Bioconductor
## phastCons30way.UCSC.hg38 3.13.0 2023-10-25 [2] Bioconductor
## phateR 1.0.7 2021-02-12 [2] CRAN (R 4.3.1)
## pheatmap 1.0.12 2019-01-04 [2] CRAN (R 4.3.1)
## phemd 1.18.0 2023-10-24 [2] Bioconductor
## PhenoGeneRanker 1.10.0 2023-10-24 [2] Bioconductor
## phenomis 1.4.0 2023-10-24 [2] Bioconductor
## phenopath 1.26.0 2023-10-24 [2] Bioconductor
## phenoTest 1.50.0 2023-10-24 [2] Bioconductor
## PhenStat 2.38.0 2023-10-24 [2] Bioconductor
## philentropy 0.7.0 2022-11-05 [2] CRAN (R 4.3.1)
## philr 1.28.0 2023-10-24 [2] Bioconductor
## PhIPData 1.10.0 2023-10-24 [2] Bioconductor
## phosphonormalizer 1.26.0 2023-10-24 [2] Bioconductor
## phosphoricons 0.2.0 2023-05-17 [2] CRAN (R 4.3.1)
## PhosR 1.12.0 2023-10-24 [2] Bioconductor
## phyclust 0.1-34 2023-09-06 [2] CRAN (R 4.3.1)
## phylobase 0.8.10 2020-03-01 [2] CRAN (R 4.3.1)
## phylogram 2.1.0 2018-06-25 [2] CRAN (R 4.3.1)
## phylolm 2.6.2 2020-06-22 [2] CRAN (R 4.3.1)
## PhyloProfile 1.16.0 2023-10-24 [2] Bioconductor
## PhyloProfileData 1.15.0 2023-10-24 [2] Bioconductor
## phyloseq 1.46.0 2023-10-24 [2] Bioconductor
## phytools 1.9-16 2023-07-14 [2] CRAN (R 4.3.1)
## Pi 2.14.0 2023-10-24 [2] Bioconductor
## piano 2.18.0 2023-10-24 [2] Bioconductor
## pickgene 1.74.0 2023-10-24 [2] Bioconductor
## PICS 2.46.0 2023-10-24 [2] Bioconductor
## Pigengene 1.28.0 2023-10-24 [2] Bioconductor
## piggyback 0.1.5 2023-07-10 [2] CRAN (R 4.3.1)
## pillar 1.9.0 2023-03-22 [2] CRAN (R 4.3.1)
## pinfsc50 1.2.0 2020-06-03 [2] CRAN (R 4.3.1)
## PING 2.46.0 2023-10-24 [2] Bioconductor
## pingr 2.0.2 2022-10-26 [2] CRAN (R 4.3.1)
## pipeComp 1.12.0 2023-10-24 [2] Bioconductor
## pipeFrame 1.18.0 2023-10-24 [2] Bioconductor
## pixmap 0.4-12 2021-01-29 [2] CRAN (R 4.3.1)
## pkgbuild 1.4.2 2023-06-26 [2] CRAN (R 4.3.1)
## pkgconfig 2.0.3 2019-09-22 [2] CRAN (R 4.3.1)
## pkgdown 2.0.7 2022-12-14 [2] CRAN (R 4.3.1)
## pkgload 1.3.3 2023-09-22 [2] CRAN (R 4.3.1)
## pkgndep 1.99.3 2023-10-13 [2] CRAN (R 4.3.1)
## planet 1.10.0 2023-10-24 [2] Bioconductor
## planttfhunter 1.2.0 2023-10-24 [2] Bioconductor
## plasmodiumanophelescdf 2.18.0 2023-06-20 [2] Bioconductor
## plasmut 1.0.0 2023-10-24 [2] Bioconductor
## plethy 1.39.0 2023-06-26 [2] Bioconductor
## plgem 1.74.0 2023-10-24 [2] Bioconductor
## plier 1.72.0 2023-10-24 [2] Bioconductor
## PloGO2 1.14.0 2023-10-24 [2] Bioconductor
## plogr 0.2.0 2018-03-25 [2] CRAN (R 4.3.1)
## plot3D 1.4 2021-05-22 [2] CRAN (R 4.3.1)
## plot3Drgl 1.0.4 2023-01-19 [2] CRAN (R 4.3.1)
## plotgardener 1.8.0 2023-10-24 [2] Bioconductor
## plotgardenerData 1.7.0 2023-10-24 [2] Bioconductor
## plotGrouper 1.20.0 2023-10-24 [2] Bioconductor
## plotly 4.10.3 2023-10-21 [2] CRAN (R 4.3.1)
## plotmo 3.6.2 2022-05-21 [2] CRAN (R 4.3.1)
## plotrix 3.8-2 2021-09-08 [2] CRAN (R 4.3.1)
## plotROC 2.3.1 2023-10-06 [2] CRAN (R 4.3.1)
## PlotTools 0.2.1 2023-09-28 [2] CRAN (R 4.3.1)
## PLPE 1.62.0 2023-10-24 [2] Bioconductor
## pls 2.8-2 2023-05-19 [2] CRAN (R 4.3.1)
## plsgenomics 1.5-2 2018-08-24 [2] CRAN (R 4.3.1)
## plsVarSel 0.9.10 2023-01-12 [2] CRAN (R 4.3.1)
## plyinteractions 1.0.0 2023-10-24 [2] Bioconductor
## plyr 1.8.9 2023-10-02 [2] CRAN (R 4.3.1)
## plyranges 1.22.0 2023-10-24 [2] Bioconductor
## PMA 1.2-2 2023-07-20 [2] CRAN (R 4.3.1)
## PMCMRplus 1.9.8 2023-10-09 [2] CRAN (R 4.3.1)
## pmm 1.34.0 2023-10-24 [2] Bioconductor
## pmp 1.14.0 2023-10-24 [2] Bioconductor
## png 0.1-8 2022-11-29 [2] CRAN (R 4.3.1)
## PoDCall 1.10.0 2023-10-24 [2] Bioconductor
## podkat 1.34.0 2023-10-24 [2] Bioconductor
## pogos 1.22.0 2023-10-24 [2] Bioconductor
## poibin 1.5 2020-01-08 [2] CRAN (R 4.3.1)
## PoiClaClu 1.0.2.1 2019-01-04 [2] CRAN (R 4.3.1)
## polspline 1.1.23 2023-06-29 [2] CRAN (R 4.3.1)
## Polychrome 1.5.1 2022-05-03 [2] CRAN (R 4.3.1)
## polyclip 1.10-6 2023-09-27 [2] CRAN (R 4.3.1)
## polyester 1.38.0 2023-10-24 [2] Bioconductor
## polylabelr 0.2.0 2020-04-19 [2] CRAN (R 4.3.1)
## polynom 1.4-1 2022-04-11 [2] CRAN (R 4.3.1)
## PolynomF 2.0-5 2022-05-02 [2] CRAN (R 4.3.1)
## PolyPhen.Hsapiens.dbSNP131 1.0.2 2023-06-20 [2] Bioconductor
## POMA 1.12.0 2023-10-24 [2] Bioconductor
## poolr 1.1-1 2022-01-26 [2] CRAN (R 4.3.1)
## poorman 0.2.6 2022-08-17 [2] CRAN (R 4.3.1)
## posterior 1.4.1 2023-03-14 [2] CRAN (R 4.3.1)
## poweRlaw 0.70.6 2020-04-25 [2] CRAN (R 4.3.1)
## powerTCR 1.22.0 2023-10-24 [2] Bioconductor
## POWSC 1.10.0 2023-10-24 [2] Bioconductor
## ppclust 1.1.0 2020-02-09 [2] CRAN (R 4.3.1)
## ppcor 1.1 2015-12-03 [2] CRAN (R 4.3.1)
## ppcseq 1.10.0 2023-10-24 [2] Bioconductor
## PPInfer 1.28.0 2023-10-24 [2] Bioconductor
## pqsfinder 2.18.0 2023-10-24 [2] Bioconductor
## prabclus 2.3-3 2023-10-24 [2] CRAN (R 4.3.1)
## pracma 2.4.2 2022-09-22 [2] CRAN (R 4.3.1)
## praise 1.0.0 2015-08-11 [2] CRAN (R 4.3.1)
## pram 1.18.0 2023-10-24 [2] Bioconductor
## praznik 11.0.0 2022-05-20 [2] CRAN (R 4.3.1)
## prebs 1.42.0 2023-10-24 [2] Bioconductor
## prebsdata 1.37.0 2023-10-24 [2] Bioconductor
## preciseTAD 1.12.0 2023-10-24 [2] Bioconductor
## preciseTADhub 1.9.0 2023-10-24 [2] Bioconductor
## precrec 0.14.4 2023-10-11 [2] CRAN (R 4.3.1)
## PREDA 1.48.0 2023-10-24 [2] Bioconductor
## PREDAsampledata 0.41.0 2023-10-24 [2] Bioconductor
## prediction 0.3.14 2019-06-17 [2] CRAN (R 4.3.1)
## preprocessCore 1.64.0 2023-10-24 [2] Bioconductor
## preseqR 4.0.0 2018-06-27 [2] CRAN (R 4.3.1)
## prettydoc 0.4.1 2021-01-10 [2] CRAN (R 4.3.1)
## prettyGraphs 2.1.6 2018-12-18 [2] CRAN (R 4.3.1)
## prettyunits 1.2.0 2023-09-24 [2] CRAN (R 4.3.1)
## primirTSS 1.20.0 2023-10-24 [2] Bioconductor
## PRIMME 3.2-5 2023-09-30 [2] CRAN (R 4.3.1)
## PrInCE 1.18.0 2023-10-24 [2] Bioconductor
## princurve 2.1.6 2021-01-18 [2] CRAN (R 4.3.1)
## printr 0.3 2023-03-08 [2] CRAN (R 4.3.1)
## prismatic 1.1.1 2022-08-15 [2] CRAN (R 4.3.1)
## proActiv 1.12.0 2023-10-24 [2] Bioconductor
## proBAMr 1.36.0 2023-10-24 [2] Bioconductor
## pROC 1.18.4 2023-07-06 [2] CRAN (R 4.3.1)
## PROcess 1.78.0 2023-10-24 [2] Bioconductor
## processx 3.8.2 2023-06-30 [2] CRAN (R 4.3.1)
## procoil 2.30.0 2023-10-24 [2] Bioconductor
## proDA 1.16.0 2023-10-24 [2] Bioconductor
## ProData 1.39.0 2023-10-24 [2] Bioconductor
## prodlim 2023.08.28 2023-08-28 [2] CRAN (R 4.3.1)
## profileModel 0.6.1 2021-01-08 [2] CRAN (R 4.3.1)
## profileplyr 1.18.0 2023-10-24 [2] Bioconductor
## profileScoreDist 1.30.0 2023-10-24 [2] Bioconductor
## profmem 0.6.0 2020-12-13 [2] CRAN (R 4.3.1)
## profvis 0.3.8 2023-05-02 [2] CRAN (R 4.3.1)
## progeny 1.24.0 2023-10-24 [2] Bioconductor
## progress 1.2.2 2019-05-16 [2] CRAN (R 4.3.1)
## progressr 0.14.0 2023-08-10 [2] CRAN (R 4.3.1)
## proj4 1.0-13 2023-08-17 [2] CRAN (R 4.3.1)
## projectR 1.18.0 2023-10-24 [2] Bioconductor
## pRoloc 1.42.0 2023-10-24 [2] Bioconductor
## pRolocdata 1.39.0 2023-10-24 [2] Bioconductor
## pRolocGUI 2.12.0 2023-10-24 [2] Bioconductor
## PROMISE 1.54.0 2023-10-24 [2] Bioconductor
## promises 1.2.1 2023-08-10 [2] CRAN (R 4.3.1)
## PROPER 1.34.0 2023-10-24 [2] Bioconductor
## PROPS 1.24.0 2023-10-24 [2] Bioconductor
## Prostar 1.34.0 2023-10-24 [2] Bioconductor
## prostateCancerCamcap 1.29.0 2023-10-24 [2] Bioconductor
## prostateCancerGrasso 1.29.0 2023-10-24 [2] Bioconductor
## prostateCancerStockholm 1.29.0 2023-10-24 [2] Bioconductor
## prostateCancerTaylor 1.29.0 2023-10-24 [2] Bioconductor
## prostateCancerVarambally 1.29.0 2023-10-24 [2] Bioconductor
## proteasy 1.4.0 2023-10-24 [2] Bioconductor
## proteinProfiles 1.42.0 2023-10-24 [2] local
## ProteoDisco 1.8.0 2023-10-24 [2] Bioconductor
## ProteoMM 1.20.0 2023-10-24 [2] Bioconductor
## protGear 1.6.0 2023-10-24 [2] Bioconductor
## ProtGenerics 1.34.0 2023-10-24 [2] Bioconductor
## proto 1.0.0 2016-10-29 [2] CRAN (R 4.3.1)
## protolite 2.3.0 2023-09-25 [2] CRAN (R 4.3.1)
## protr 1.6-3 2023-03-05 [2] CRAN (R 4.3.1)
## protViz 0.7.7 2023-02-06 [2] CRAN (R 4.3.1)
## proxy 0.4-27 2022-06-09 [2] CRAN (R 4.3.1)
## proxyC 0.3.3 2022-10-06 [2] CRAN (R 4.3.1)
## PRROC 1.3.1 2018-06-19 [2] CRAN (R 4.3.1)
## pryr 0.1.6 2023-01-17 [2] CRAN (R 4.3.1)
## ps 1.7.5 2023-04-18 [2] CRAN (R 4.3.1)
## PSCBS 0.66.0 2021-10-23 [2] CRAN (R 4.3.1)
## pscl 1.5.5.1 2023-05-10 [2] CRAN (R 4.3.1)
## PSEA 1.36.0 2023-10-24 [2] Bioconductor
## psichomics 1.28.0 2023-10-24 [2] Bioconductor
## PSMatch 1.6.0 2023-10-24 [2] Bioconductor
## pspline 1.0-19 2022-02-20 [2] CRAN (R 4.3.1)
## psych 2.3.9 2023-09-26 [2] CRAN (R 4.3.1)
## psygenet2r 1.34.0 2023-10-24 [2] Bioconductor
## ptairData 1.9.0 2023-10-24 [2] Bioconductor
## ptairMS 1.10.0 2023-10-24 [2] Bioconductor
## PtH2O2lipids 1.27.0 2023-10-24 [2] Bioconductor
## ptw 1.9-16 2022-01-19 [2] CRAN (R 4.3.1)
## puma 3.44.0 2023-10-24 [2] Bioconductor
## pumadata 2.37.0 2023-10-24 [2] Bioconductor
## PureCN 2.8.0 2023-10-24 [2] Bioconductor
## purrr 1.0.2 2023-08-10 [2] CRAN (R 4.3.1)
## pushbar 0.1.0 2019-03-15 [2] CRAN (R 4.3.1)
## pvac 1.50.0 2023-10-24 [2] Bioconductor
## pvca 1.42.0 2023-10-24 [2] Bioconductor
## pvclust 2.2-0 2019-11-19 [2] CRAN (R 4.3.1)
## Pviz 1.36.0 2023-10-24 [2] Bioconductor
## PWMEnrich 4.38.0 2023-10-24 [2] Bioconductor
## PWMEnrich.Dmelanogaster.background 4.35.0 2023-10-24 [2] Bioconductor
## PWMEnrich.Hsapiens.background 4.35.0 2023-10-24 [2] Bioconductor
## PWMEnrich.Mmusculus.background 4.35.0 2023-10-24 [2] Bioconductor
## pwOmics 1.34.0 2023-10-24 [2] Bioconductor
## pwr 1.3-0 2020-03-17 [2] CRAN (R 4.3.1)
## pwrEWAS 1.16.0 2023-10-24 [2] Bioconductor
## pwrEWAS.data 1.15.1 2023-10-24 [2] Bioconductor
## qap 0.1-2 2022-06-27 [2] CRAN (R 4.3.1)
## qckitfastq 1.18.0 2023-10-24 [2] Bioconductor
## qcmetrics 1.40.0 2023-10-24 [2] Bioconductor
## qdapRegex 0.7.8 2023-10-17 [2] CRAN (R 4.3.1)
## qdapTools 1.3.7 2023-05-10 [2] CRAN (R 4.3.1)
## QDNAseq 1.38.0 2023-10-24 [2] Bioconductor
## QDNAseq.hg19 1.31.0 2023-10-24 [2] Bioconductor
## QDNAseq.mm10 1.31.0 2023-10-24 [2] Bioconductor
## QFeatures 1.12.0 2023-10-24 [2] Bioconductor
## qgraph 1.9.5 2023-05-16 [2] CRAN (R 4.3.1)
## qlcMatrix 0.9.7 2018-04-20 [2] CRAN (R 4.3.1)
## qmtools 1.6.0 2023-10-24 [2] Bioconductor
## qpcR 1.4-1 2018-06-14 [2] CRAN (R 4.3.1)
## qpcrNorm 1.60.0 2023-10-24 [2] Bioconductor
## qpdf 1.3.2 2023-03-17 [2] CRAN (R 4.3.1)
## qpgraph 2.36.0 2023-10-24 [2] Bioconductor
## qPLEXanalyzer 1.20.0 2023-10-24 [2] Bioconductor
## qPLEXdata 1.19.1 2023-10-24 [2] Bioconductor
## qqconf 1.3.2 2023-04-14 [2] CRAN (R 4.3.1)
## qqman 0.1.9 2023-08-23 [2] CRAN (R 4.3.1)
## qs 0.25.5 2023-02-22 [2] CRAN (R 4.3.1)
## qsea 1.28.0 2023-10-24 [2] Bioconductor
## qsmooth 1.18.0 2023-10-24 [2] Bioconductor
## QSutils 1.20.0 2023-10-24 [2] Bioconductor
## qsvaR 1.6.0 2023-10-24 [2] Bioconductor
## qtl 1.60 2023-04-18 [2] CRAN (R 4.3.1)
## QTLExperiment 1.0.0 2023-10-24 [2] Bioconductor
## Qtlizer 1.16.0 2023-10-24 [2] Bioconductor
## quadprog 1.5-8 2019-11-20 [2] CRAN (R 4.3.1)
## qualV 0.3-5 2023-07-02 [2] CRAN (R 4.3.1)
## quanteda 3.3.1 2023-05-18 [2] CRAN (R 4.3.1)
## quantiseqr 1.10.0 2023-10-24 [2] Bioconductor
## quantmod 0.4.25 2023-08-22 [2] CRAN (R 4.3.1)
## quantreg 5.97 2023-08-19 [2] CRAN (R 4.3.1)
## quantro 1.36.0 2023-10-24 [2] Bioconductor
## quantsmooth 1.68.0 2023-10-24 [2] Bioconductor
## quarto 1.3 2023-09-19 [2] CRAN (R 4.3.1)
## QuartPAC 1.34.0 2023-10-24 [2] Bioconductor
## QuasR 1.42.0 2023-10-24 [2] Bioconductor
## QuaternaryProd 1.36.0 2023-10-24 [2] Bioconductor
## QUBIC 1.30.0 2023-10-24 [2] Bioconductor
## QUBICdata 1.29.0 2023-10-24 [2] Bioconductor
## questionr 0.7.8 2023-01-31 [2] CRAN (R 4.3.1)
## QuickJSR 1.0.7 2023-10-15 [2] CRAN (R 4.3.1)
## qusage 2.36.0 2023-10-24 [2] Bioconductor
## qvalue 2.34.0 2023-10-24 [2] Bioconductor
## qvcalc 1.0.3 2023-05-26 [2] CRAN (R 4.3.1)
## R.cache 0.16.0 2022-07-21 [2] CRAN (R 4.3.1)
## R.devices 2.17.1 2022-06-21 [2] CRAN (R 4.3.1)
## R.filesets 2.15.0 2022-07-21 [2] CRAN (R 4.3.1)
## R.huge 0.10.0 2023-06-24 [2] CRAN (R 4.3.1)
## R.matlab 3.7.0 2022-08-25 [2] CRAN (R 4.3.1)
## R.methodsS3 1.8.2 2022-06-13 [2] CRAN (R 4.3.1)
## R.oo 1.25.0 2022-06-12 [2] CRAN (R 4.3.1)
## R.rsp 0.45.0 2022-06-27 [2] CRAN (R 4.3.1)
## R.utils 2.12.2 2022-11-11 [2] CRAN (R 4.3.1)
## r2glmm 0.1.2 2017-08-05 [2] CRAN (R 4.3.1)
## R2HTML 2.3.3 2022-05-23 [2] CRAN (R 4.3.1)
## R2jags 0.7-1 2021-08-05 [2] CRAN (R 4.3.1)
## R2WinBUGS 2.1-21 2015-07-30 [2] CRAN (R 4.3.1)
## R3CPET 1.34.0 2023-10-24 [2] Bioconductor
## r3Cseq 1.48.0 2023-10-24 [2] Bioconductor
## R453Plus1Toolbox 1.52.0 2023-10-24 [2] Bioconductor
## R4RNA 1.30.0 2023-10-24 [2] Bioconductor
## R6 2.5.1 2021-08-19 [2] CRAN (R 4.3.1)
## R6P 0.3.0 2022-10-02 [2] CRAN (R 4.3.1)
## radiant.data 1.6.2 2023-10-16 [2] CRAN (R 4.3.1)
## RadioGx 2.6.0 2023-10-24 [2] Bioconductor
## rae230a.db 3.13.0 2023-06-20 [2] Bioconductor
## rae230aprobe 2.18.0 2023-06-20 [2] Bioconductor
## raer 1.0.0 2023-10-24 [2] Bioconductor
## raerdata 0.99.3 2023-10-24 [2] Bioconductor
## rafalib 1.0.0 2015-08-09 [2] CRAN (R 4.3.1)
## ragg 1.2.6 2023-10-10 [2] CRAN (R 4.3.1)
## RaggedExperiment 1.26.0 2023-10-24 [2] Bioconductor
## RAIDS 1.0.0 2023-10-24 [2] Bioconductor
## rain 1.36.0 2023-10-24 [2] Bioconductor
## rainbow 3.7 2022-10-09 [2] CRAN (R 4.3.1)
## ramr 1.10.0 2023-10-24 [2] Bioconductor
## ramwas 1.26.0 2023-10-24 [2] Bioconductor
## randomcoloR 1.1.0.1 2019-11-24 [2] CRAN (R 4.3.1)
## randomForest 4.7-1.1 2022-05-23 [2] CRAN (R 4.3.1)
## randomForestSRC 3.2.2 2023-05-23 [2] CRAN (R 4.3.1)
## randomizr 1.0.0 2023-08-10 [2] CRAN (R 4.3.1)
## RandomWalkRestartMH 1.22.0 2023-10-24 [2] Bioconductor
## randPack 1.48.0 2023-10-24 [2] Bioconductor
## randRotation 1.14.0 2023-10-24 [2] Bioconductor
## randtests 1.0.1 2022-06-20 [2] CRAN (R 4.3.1)
## randtoolbox 2.0.4 2023-01-28 [2] CRAN (R 4.3.1)
## ranger 0.15.1 2023-04-03 [2] CRAN (R 4.3.1)
## RankAggreg 0.6.6 2020-05-09 [2] CRAN (R 4.3.1)
## RankProd 3.28.0 2023-10-24 [2] Bioconductor
## RANN 2.6.1 2019-01-08 [2] CRAN (R 4.3.1)
## rapiclient 0.1.3 2020-01-17 [2] CRAN (R 4.3.1)
## rapidjsonr 1.2.0 2020-03-08 [2] CRAN (R 4.3.1)
## RApiSerialize 0.1.2 2022-08-25 [2] CRAN (R 4.3.1)
## rappdirs 0.3.3 2021-01-31 [2] CRAN (R 4.3.1)
## rapportools 1.1 2022-03-22 [2] CRAN (R 4.3.1)
## RAREsim 1.6.0 2023-10-24 [2] Bioconductor
## RareVariantVis 2.30.0 2023-10-24 [2] Bioconductor
## rARPACK 0.11-0 2016-03-10 [2] CRAN (R 4.3.1)
## Rarr 1.2.0 2023-10-24 [2] Bioconductor
## raster 3.6-26 2023-10-14 [2] CRAN (R 4.3.1)
## rat2302frmavecs 0.99.11 2023-10-25 [2] Bioconductor
## ratelimitr 0.4.1 2018-10-07 [2] CRAN (R 4.3.1)
## Rattus.norvegicus 1.3.1 2023-06-20 [2] Bioconductor
## rawrr 1.10.0 2023-10-24 [2] Bioconductor
## RbcBook1 1.70.0 2023-10-24 [2] Bioconductor
## Rbec 1.10.0 2023-10-24 [2] Bioconductor
## rbenchmark 1.0.0 2012-08-30 [2] CRAN (R 4.3.1)
## rBeta2009 1.0 2012-03-01 [2] CRAN (R 4.3.1)
## RBGL 1.78.0 2023-10-24 [2] Bioconductor
## rbibutils 2.2.15 2023-08-21 [2] CRAN (R 4.3.1)
## rbioapi 0.8.0 2023-09-30 [2] CRAN (R 4.3.1)
## RBioFormats 1.2.0 2023-10-24 [2] Bioconductor
## RBioinf 1.62.0 2023-10-24 [2] Bioconductor
## rBiopaxParser 2.42.0 2023-10-24 [2] Bioconductor
## RBM 1.34.0 2023-10-24 [2] Bioconductor
## rbokeh 0.5.2 2021-08-04 [2] CRAN (R 4.3.1)
## Rbowtie 1.42.0 2023-10-24 [2] Bioconductor
## Rbowtie2 2.8.0 2023-10-24 [2] Bioconductor
## rbsurv 2.60.0 2023-10-24 [2] Bioconductor
## Rbwa 1.6.0 2023-10-24 [2] Bioconductor
## Rcapture 1.4-4 2022-05-04 [2] CRAN (R 4.3.1)
## RCAS 1.28.0 2023-10-24 [2] Bioconductor
## RCASPAR 1.48.0 2023-10-24 [2] Bioconductor
## rcdk 3.8.1 2023-07-01 [2] CRAN (R 4.3.1)
## rcdklibs 2.8 2022-09-25 [2] CRAN (R 4.3.1)
## rcellminer 2.24.0 2023-10-24 [2] Bioconductor
## rcellminerData 2.23.1 2023-10-24 [2] Bioconductor
## rCGH 1.32.0 2023-10-24 [2] Bioconductor
## Rcgmin 2022-4.30 2022-05-11 [2] CRAN (R 4.3.1)
## RCircos 1.2.2 2021-12-19 [2] CRAN (R 4.3.1)
## RcisTarget 1.22.0 2023-10-24 [2] Bioconductor
## RcisTarget.hg19.motifDBs.cisbpOnly.500bp 1.21.0 2023-10-24 [2] Bioconductor
## rclipboard 0.2.0 2023-10-21 [2] CRAN (R 4.3.1)
## RCM 1.18.0 2023-10-24 [2] Bioconductor
## rcmdcheck 1.4.0 2021-09-27 [2] CRAN (R 4.3.1)
## RcmdrMisc 2.9-1 2023-09-26 [2] CRAN (R 4.3.1)
## Rcollectl 1.2.0 2023-10-24 [2] Bioconductor
## RColorBrewer 1.1-3 2022-04-03 [2] CRAN (R 4.3.1)
## rcompanion 2.4.34 2023-09-17 [2] CRAN (R 4.3.1)
## Rcpi 1.38.0 2023-10-24 [2] Bioconductor
## Rcpp 1.0.11 2023-07-06 [2] CRAN (R 4.3.1)
## RcppAlgos 2.8.2 2023-10-02 [2] CRAN (R 4.3.1)
## RcppAnnoy 0.0.21 2023-07-02 [2] CRAN (R 4.3.1)
## RcppArmadillo 0.12.6.4.0 2023-09-10 [2] CRAN (R 4.3.1)
## RcppCCTZ 0.2.12 2022-11-06 [2] CRAN (R 4.3.1)
## RcppDate 0.0.3 2021-05-19 [2] CRAN (R 4.3.1)
## RcppDE 0.1.7 2022-12-20 [2] CRAN (R 4.3.1)
## RcppDist 0.1.1 2018-10-28 [2] CRAN (R 4.3.1)
## RcppEigen 0.3.3.9.3 2022-11-05 [2] CRAN (R 4.3.1)
## RcppGSL 0.3.13 2023-01-13 [2] CRAN (R 4.3.1)
## RcppHMM 1.2.2 2017-11-21 [2] CRAN (R 4.3.1)
## RcppHNSW 0.5.0 2023-09-19 [2] CRAN (R 4.3.1)
## RcppInt64 0.0.3 2023-09-19 [2] CRAN (R 4.3.1)
## RcppML 0.3.7 2021-09-21 [2] CRAN (R 4.3.1)
## RcppNumerical 0.6-0 2023-09-06 [2] CRAN (R 4.3.1)
## RcppParallel 5.1.7 2023-02-27 [2] CRAN (R 4.3.1)
## RcppProgress 0.4.2 2020-02-06 [2] CRAN (R 4.3.1)
## RcppRoll 0.3.0 2018-06-05 [2] CRAN (R 4.3.1)
## RcppSpdlog 0.0.14 2023-07-10 [2] CRAN (R 4.3.1)
## RcppThread 2.1.6 2023-10-18 [2] CRAN (R 4.3.1)
## RcppTOML 0.2.2 2023-01-29 [2] CRAN (R 4.3.1)
## RcppZiggurat 0.1.6 2020-10-20 [2] CRAN (R 4.3.1)
## RCSL 1.10.0 2023-10-24 [2] Bioconductor
## RCurl 1.98-1.12 2023-03-27 [2] CRAN (R 4.3.1)
## Rcwl 1.18.0 2023-10-24 [2] Bioconductor
## RcwlPipelines 1.18.0 2023-10-24 [2] Bioconductor
## RCX 1.6.0 2023-10-24 [2] Bioconductor
## RCy3 2.22.0 2023-10-24 [2] Bioconductor
## RCyjs 2.24.0 2023-10-24 [2] Bioconductor
## rDGIdb 1.28.0 2023-10-24 [2] Bioconductor
## Rdisop 1.62.0 2023-10-24 [2] Bioconductor
## rdist 0.0.5 2020-05-04 [2] CRAN (R 4.3.1)
## Rdpack 2.5 2023-08-21 [2] CRAN (R 4.3.1)
## RDRToolbox 1.52.0 2023-10-24 [2] Bioconductor
## reactable 0.4.4 2023-03-12 [2] CRAN (R 4.3.1)
## reactome.db 1.86.0 2023-10-17 [2] Bioconductor
## ReactomeContentService4R 1.10.0 2023-10-24 [2] Bioconductor
## ReactomeGraph4R 1.10.0 2023-10-24 [2] Bioconductor
## ReactomeGSA 1.16.0 2023-10-24 [2] Bioconductor
## ReactomeGSA.data 1.15.0 2023-10-24 [2] Bioconductor
## ReactomePA 1.46.0 2023-10-24 [2] Bioconductor
## reactR 0.5.0 2023-10-11 [2] CRAN (R 4.3.1)
## readbitmap 0.1.5 2018-06-27 [2] CRAN (R 4.3.1)
## readBrukerFlexData 1.9.1 2023-04-01 [2] CRAN (R 4.3.1)
## reader 1.0.6 2017-01-03 [2] CRAN (R 4.3.1)
## readJDX 0.6.1 2021-09-20 [2] CRAN (R 4.3.1)
## readMzXmlData 2.8.3 2023-08-19 [2] CRAN (R 4.3.1)
## ReadqPCR 1.48.0 2023-10-24 [2] Bioconductor
## readr 2.1.4 2023-02-10 [2] CRAN (R 4.3.1)
## readstata13 0.10.1 2023-02-21 [2] CRAN (R 4.3.1)
## readxl 1.4.3 2023-07-06 [2] CRAN (R 4.3.1)
## rearrr 0.3.3 2023-01-18 [2] CRAN (R 4.3.1)
## REBET 1.20.0 2023-10-24 [2] Bioconductor
## rebook 1.12.0 2023-10-24 [2] Bioconductor
## rebus 0.1-3 2017-04-25 [2] CRAN (R 4.3.1)
## rebus.base 0.0-3 2017-04-25 [2] CRAN (R 4.3.1)
## rebus.datetimes 0.0-2 2022-11-03 [2] CRAN (R 4.3.1)
## rebus.numbers 0.0-1 2015-12-16 [2] CRAN (R 4.3.1)
## rebus.unicode 0.0-2 2017-01-03 [2] CRAN (R 4.3.1)
## receptLoss 1.14.0 2023-10-24 [2] Bioconductor
## recipes 1.0.8 2023-08-25 [2] CRAN (R 4.3.1)
## reconsi 1.14.0 2023-10-24 [2] Bioconductor
## RecordLinkage 0.4-12.4 2022-11-08 [2] CRAN (R 4.3.1)
## recount 1.28.0 2023-10-24 [2] Bioconductor
## recount3 1.12.0 2023-10-24 [2] Bioconductor
## recountmethylation 1.12.0 2023-10-24 [2] Bioconductor
## recountWorkflow 1.27.0 2023-10-24 [2] Bioconductor
## recoup 1.30.0 2023-10-24 [2] Bioconductor
## RedeR 2.6.0 2023-10-24 [2] Bioconductor
## RedisParam 1.4.0 2023-10-24 [2] Bioconductor
## REDseq 1.48.0 2023-10-24 [2] Bioconductor
## redux 1.1.3 2022-01-12 [2] CRAN (R 4.3.1)
## RefManageR 1.4.0 2022-09-30 [2] CRAN (R 4.3.1)
## RefPlus 1.72.0 2023-10-24 [2] Bioconductor
## RegEnrich 1.12.0 2023-10-24 [2] Bioconductor
## regionalpcs 1.0.0 2023-10-24 [2] Bioconductor
## RegionalST 1.0.0 2023-10-24 [2] Bioconductor
## regioneR 1.34.0 2023-10-24 [2] Bioconductor
## regioneReloaded 1.4.0 2023-10-24 [2] Bioconductor
## regionReport 1.36.0 2023-10-24 [2] Bioconductor
## registry 0.5-1 2019-03-05 [2] CRAN (R 4.3.1)
## RegParallel 1.19.0 2023-10-24 [2] Bioconductor
## regsplice 1.28.0 2023-10-24 [2] Bioconductor
## regutools 1.14.0 2023-10-24 [2] Bioconductor
## relations 0.6-13 2023-03-07 [2] CRAN (R 4.3.1)
## reldist 1.7-2 2023-02-17 [2] CRAN (R 4.3.1)
## relimp 1.0-5 2016-03-30 [2] CRAN (R 4.3.1)
## remaCor 0.0.16 2023-06-21 [2] CRAN (R 4.3.1)
## rematch 2.0.0 2023-08-30 [2] CRAN (R 4.3.1)
## rematch2 2.1.2 2020-05-01 [2] CRAN (R 4.3.1)
## remotes 2.4.2.1 2023-07-18 [2] CRAN (R 4.3.1)
## REMP 1.26.0 2023-10-24 [2] Bioconductor
## rentrez 1.2.3 2020-11-10 [2] CRAN (R 4.3.1)
## renv 1.0.3 2023-09-19 [2] CRAN (R 4.3.1)
## Repitools 1.48.0 2023-10-24 [2] Bioconductor
## repmis 0.5 2016-02-07 [2] CRAN (R 4.3.1)
## repo 2.1.5 2020-02-08 [2] CRAN (R 4.3.1)
## ReportingTools 2.42.0 2023-10-24 [2] Bioconductor
## reportr 1.3.0 2018-10-26 [2] CRAN (R 4.3.1)
## reportROC 3.6 2022-06-17 [2] CRAN (R 4.3.1)
## repr 1.1.6 2023-01-26 [2] CRAN (R 4.3.1)
## reprex 2.0.2 2022-08-17 [2] CRAN (R 4.3.1)
## RepViz 1.18.0 2023-10-24 [2] Bioconductor
## ReQON 1.48.0 2023-10-24 [2] Bioconductor
## reshape 0.8.9 2022-04-12 [2] CRAN (R 4.3.1)
## reshape2 1.4.4 2020-04-09 [2] CRAN (R 4.3.1)
## ResidualMatrix 1.12.0 2023-10-24 [2] Bioconductor
## RESOLVE 1.4.0 2023-10-24 [2] Bioconductor
## restfulr 0.0.15 2022-06-16 [2] CRAN (R 4.3.1)
## restfulSE 1.24.0 2023-10-24 [2] Bioconductor
## restfulSEData 1.23.1 2023-10-24 [2] Bioconductor
## reticulate 1.34.0 2023-10-12 [2] CRAN (R 4.3.1)
## retrofit 1.2.0 2023-10-24 [2] Bioconductor
## ReUseData 1.2.0 2023-10-24 [2] Bioconductor
## rex 1.2.1 2021-11-26 [2] CRAN (R 4.3.1)
## rexposome 1.24.0 2023-10-24 [2] Bioconductor
## rfaRm 1.14.0 2023-10-24 [2] Bioconductor
## Rfast 2.0.8 2023-07-03 [2] CRAN (R 4.3.1)
## Rfastp 1.12.0 2023-10-24 [2] Bioconductor
## Rfit 0.24.6 2023-09-08 [2] CRAN (R 4.3.1)
## RFOC 3.4-10 2023-09-06 [2] CRAN (R 4.3.1)
## RforProteomics 1.39.1 2023-10-24 [2] Bioconductor
## rfPred 1.40.0 2023-10-24 [2] Bioconductor
## rGADEM 2.50.0 2023-10-24 [2] Bioconductor
## rGenomeTracks 1.8.0 2023-10-24 [2] Bioconductor
## rGenomeTracksData 0.99.0 2023-10-25 [2] Bioconductor
## rgeos 0.6-4 2023-07-18 [2] CRAN (R 4.3.1)
## rgl 1.2.1 2023-07-06 [2] CRAN (R 4.3.1)
## RGMQL 1.22.0 2023-10-24 [2] Bioconductor
## RGMQLlib 1.21.0 2023-10-24 [2] Bioconductor
## RgnTX 1.4.0 2023-10-24 [2] Bioconductor
## rgoslin 1.6.0 2023-10-24 [2] Bioconductor
## RGraph2js 1.30.0 2023-10-24 [2] Bioconductor
## Rgraphviz 2.46.0 2023-10-24 [2] Bioconductor
## rGREAT 2.4.0 2023-10-24 [2] Bioconductor
## RGSEA 1.36.0 2023-10-24 [2] Bioconductor
## rgsepd 1.34.0 2023-10-24 [2] Bioconductor
## rhandsontable 0.3.8 2021-05-27 [2] CRAN (R 4.3.1)
## rhdf5 2.46.0 2023-10-24 [2] Bioconductor
## rhdf5client 1.24.0 2023-10-24 [2] Bioconductor
## rhdf5filters 1.14.0 2023-10-24 [2] Bioconductor
## Rhdf5lib 1.24.0 2023-10-24 [2] Bioconductor
## rheumaticConditionWOLLBOLD 1.39.0 2023-10-24 [2] Bioconductor
## Rhisat2 1.18.0 2023-10-24 [2] Bioconductor
## RhpcBLASctl 0.23-42 2023-02-11 [2] CRAN (R 4.3.1)
## Rhtslib 2.4.0 2023-10-24 [2] Bioconductor
## RiboCrypt 1.8.0 2023-10-24 [2] Bioconductor
## RiboDiPA 1.10.0 2023-10-24 [2] Bioconductor
## RiboProfiling 1.32.0 2023-10-24 [2] Bioconductor
## ribor 1.14.0 2023-10-24 [2] Bioconductor
## riboSeqR 1.36.0 2023-10-24 [2] Bioconductor
## ribosomeProfilingQC 1.14.0 2023-10-24 [2] Bioconductor
## ridge 3.3 2022-04-11 [2] CRAN (R 4.3.1)
## rifi 1.6.0 2023-10-24 [2] Bioconductor
## rifiComparative 1.2.0 2023-10-24 [2] Bioconductor
## RImmPort 1.30.0 2023-10-24 [2] Bioconductor
## Ringo 1.66.0 2023-10-24 [2] Bioconductor
## rintrojs 0.3.2 2022-08-09 [2] CRAN (R 4.3.1)
## rio 1.0.1 2023-09-19 [2] CRAN (R 4.3.1)
## RIPAT 1.12.0 2023-10-24 [2] Bioconductor
## Risa 1.44.0 2023-10-24 [2] Bioconductor
## RISmed 2.3.0 2021-07-05 [2] CRAN (R 4.3.1)
## RITAN 1.26.0 2023-10-24 [2] Bioconductor
## RITANdata 1.25.1 2023-10-24 [2] Bioconductor
## ritis 1.0.0 2021-02-02 [2] CRAN (R 4.3.1)
## RIVER 1.26.0 2023-10-24 [2] Bioconductor
## rjags 4-14 2023-04-23 [2] CRAN (R 4.3.1)
## rJava 1.0-6 2021-12-10 [2] CRAN (R 4.3.1)
## RJMCMCNucleosomes 1.26.0 2023-10-24 [2] Bioconductor
## rjson 0.2.21 2022-01-09 [2] CRAN (R 4.3.1)
## rjsoncons 1.0.0 2022-09-29 [2] CRAN (R 4.3.1)
## RJSONIO 1.3-1.8 2023-01-31 [2] CRAN (R 4.3.1)
## Rlab 4.0 2022-05-04 [2] CRAN (R 4.3.1)
## Rlabkey 2.12.0 2023-08-18 [2] CRAN (R 4.3.1)
## rlang 1.1.1 2023-04-28 [2] CRAN (R 4.3.1)
## RLassoCox 1.10.0 2023-10-24 [2] Bioconductor
## rlecuyer 0.3-7 2023-03-24 [2] CRAN (R 4.3.1)
## RLHub 1.7.0 2023-10-24 [2] Bioconductor
## rlist 0.4.6.2 2021-09-03 [2] CRAN (R 4.3.1)
## RLMM 1.64.0 2023-10-24 [2] Bioconductor
## RLSeq 1.8.0 2023-10-24 [2] Bioconductor
## Rmagpie 1.58.0 2023-10-24 [2] Bioconductor
## RMallow 1.1 2020-02-07 [2] CRAN (R 4.3.1)
## RMariaDB 1.3.0 2023-10-09 [2] CRAN (R 4.3.1)
## rmarkdown 2.25 2023-09-18 [2] CRAN (R 4.3.1)
## RMassBank 3.12.0 2023-10-24 [2] Bioconductor
## RMassBankData 1.39.0 2023-10-24 [2] Bioconductor
## rmdformats 1.0.4 2022-05-17 [2] CRAN (R 4.3.1)
## rmelting 1.18.0 2023-10-24 [2] Bioconductor
## rmeta 3.0 2018-03-20 [2] CRAN (R 4.3.1)
## rmio 0.4.0 2022-02-17 [2] CRAN (R 4.3.1)
## Rmisc 1.5.1 2022-05-02 [2] CRAN (R 4.3.1)
## Rmixmod 2.1.9 2023-09-25 [2] CRAN (R 4.3.1)
## Rmmquant 1.20.0 2023-10-24 [2] Bioconductor
## Rmpfr 0.9-3 2023-08-08 [2] CRAN (R 4.3.1)
## Rmpi 0.7-1 2023-03-18 [2] CRAN (R 4.3.1)
## rms 6.7-1 2023-09-12 [2] CRAN (R 4.3.1)
## RMSNumpress 1.0.1 2021-02-04 [2] CRAN (R 4.3.1)
## rmspc 1.8.0 2023-10-24 [2] Bioconductor
## RMTstat 0.3.1 2022-04-12 [2] CRAN (R 4.3.1)
## rmutil 1.1.10 2022-10-27 [2] CRAN (R 4.3.1)
## RMySQL 0.10.26 2023-09-26 [2] CRAN (R 4.3.1)
## rmzqc 0.5.3 2023-08-25 [2] CRAN (R 4.3.1)
## RNAAgeCalc 1.14.0 2023-10-24 [2] Bioconductor
## RNAdecay 1.22.0 2023-10-24 [2] Bioconductor
## rnaEditr 1.12.0 2023-10-24 [2] Bioconductor
## RNAinteract 1.50.0 2023-10-24 [2] Bioconductor
## RNAinteractMAPK 1.39.0 2023-10-24 [2] Bioconductor
## RNAmodR 1.16.0 2023-10-24 [2] Bioconductor
## RNAmodR.AlkAnilineSeq 1.16.0 2023-10-24 [2] Bioconductor
## RNAmodR.Data 1.15.0 2023-10-24 [2] Bioconductor
## RNAmodR.ML 1.16.0 2023-10-24 [2] Bioconductor
## RNAmodR.RiboMethSeq 1.16.0 2023-10-24 [2] Bioconductor
## RNAsense 1.16.0 2023-10-24 [2] Bioconductor
## RNAseq123 1.27.0 2023-10-24 [2] Bioconductor
## rnaseqcomp 1.32.0 2023-10-24 [2] Bioconductor
## RNAseqCovarImpute 1.0.0 2023-10-24 [2] Bioconductor
## RNAseqData.HNRNPC.bam.chr14 0.39.0 2023-10-24 [2] Bioconductor
## rnaseqDTU 1.23.0 2023-10-24 [2] Bioconductor
## rnaseqGene 1.27.0 2023-10-24 [2] Bioconductor
## RnaSeqGeneEdgeRQL 1.27.0 2023-10-24 [2] Bioconductor
## RNASeqPower 1.42.0 2023-10-24 [2] Bioconductor
## RnaSeqSampleSize 2.12.0 2023-10-24 [2] Bioconductor
## RnaSeqSampleSizeData 1.33.0 2023-10-24 [2] Bioconductor
## RnBeads 2.20.0 2023-10-24 [2] Bioconductor
## RnBeads.hg19 1.33.0 2023-10-24 [2] local
## RnBeads.hg38 1.33.0 2023-10-24 [2] local
## RnBeads.mm10 2.9.0 2023-10-24 [2] local
## RnBeads.mm9 1.33.0 2023-10-24 [2] local
## RnBeads.rn5 1.33.0 2023-10-24 [2] local
## rncl 0.8.7 2023-01-08 [2] CRAN (R 4.3.1)
## RNeXML 2.4.11 2023-02-01 [2] CRAN (R 4.3.1)
## rngtools 1.5.2 2021-09-20 [2] CRAN (R 4.3.1)
## rngWELL 0.10-9 2023-01-16 [2] CRAN (R 4.3.1)
## RNifti 1.5.0 2023-05-17 [2] CRAN (R 4.3.1)
## Rnits 1.36.0 2023-10-24 [2] Bioconductor
## RNOmni 1.0.1.2 2023-09-11 [2] CRAN (R 4.3.1)
## roar 1.38.0 2023-10-24 [2] Bioconductor
## roastgsa 1.0.0 2023-10-24 [2] Bioconductor
## robust 0.7-2 2023-06-23 [2] CRAN (R 4.3.1)
## robustbase 0.99-0 2023-06-16 [2] CRAN (R 4.3.1)
## RobustRankAggreg 1.2.1 2022-10-03 [2] CRAN (R 4.3.1)
## ROC 1.78.0 2023-10-24 [2] Bioconductor
## ROCit 2.1.1 2020-06-14 [2] CRAN (R 4.3.1)
## ROCpAI 1.14.0 2023-10-24 [2] Bioconductor
## ROCR 1.0-11 2020-05-02 [2] CRAN (R 4.3.1)
## ROI 1.0-1 2023-04-20 [2] CRAN (R 4.3.1)
## ROI.plugin.lpsolve 1.0-2 2023-07-07 [2] CRAN (R 4.3.1)
## RolDE 1.6.0 2023-10-24 [2] Bioconductor
## rols 2.30.0 2023-10-24 [2] Bioconductor
## ROntoTools 2.30.0 2023-10-24 [2] Bioconductor
## Rook 1.2 2022-11-07 [2] CRAN (R 4.3.1)
## rootSolve 1.8.2.4 2023-09-21 [2] CRAN (R 4.3.1)
## ropls 1.34.0 2023-10-24 [2] Bioconductor
## roptim 0.1.6 2022-08-06 [2] CRAN (R 4.3.1)
## rorcid 0.7.0 2021-01-20 [2] CRAN (R 4.3.1)
## ROSeq 1.14.0 2023-10-24 [2] Bioconductor
## rotl 3.1.0 2023-06-15 [2] CRAN (R 4.3.1)
## ROTS 1.30.0 2023-10-24 [2] Bioconductor
## roxygen2 7.2.3 2022-12-08 [2] CRAN (R 4.3.1)
## RPA 1.58.0 2023-10-24 [2] Bioconductor
## rpart 4.1.21 2023-10-09 [3] CRAN (R 4.3.1)
## rpart.plot 3.1.1 2022-05-21 [2] CRAN (R 4.3.1)
## rphylopic 1.2.1 2023-10-10 [2] CRAN (R 4.3.1)
## RPMG 2.2-7 2023-08-19 [2] CRAN (R 4.3.1)
## RPMM 1.25 2017-02-28 [2] CRAN (R 4.3.1)
## RPostgres 1.4.6 2023-10-22 [2] CRAN (R 4.3.1)
## RPostgreSQL 0.7-5 2023-02-10 [2] CRAN (R 4.3.1)
## rprimer 1.6.0 2023-10-24 [2] Bioconductor
## rprojroot 2.0.3 2022-04-02 [2] CRAN (R 4.3.1)
## RProtoBufLib 2.14.0 2023-10-24 [2] Bioconductor
## rpx 2.10.0 2023-10-24 [2] Bioconductor
## Rqc 1.36.0 2023-10-24 [2] Bioconductor
## rqt 1.28.0 2023-10-24 [2] Bioconductor
## rqubic 1.48.0 2023-10-24 [2] Bioconductor
## rrBLUP 4.6.2 2023-01-06 [2] CRAN (R 4.3.1)
## RRBSdata 1.21.0 2023-10-24 [2] Bioconductor
## rrcov 1.7-4 2023-06-24 [2] CRAN (R 4.3.1)
## rRDP 1.36.0 2023-10-24 [2] Bioconductor
## rRDPData 1.21.0 2023-10-24 [2] Bioconductor
## rredlist 0.7.1 2022-11-11 [2] CRAN (R 4.3.1)
## RRHO 1.42.0 2023-10-24 [2] Bioconductor
## rrvgo 1.14.0 2023-10-24 [2] Bioconductor
## rsample 1.2.0 2023-08-23 [2] CRAN (R 4.3.1)
## Rsamtools 2.18.0 2023-10-24 [2] Bioconductor
## rsbml 2.60.0 2023-10-24 [2] Bioconductor
## rsconnect 1.1.1 2023-10-04 [2] CRAN (R 4.3.1)
## rScudo 1.18.0 2023-10-24 [2] Bioconductor
## RSEIS 4.1-6 2023-08-19 [2] CRAN (R 4.3.1)
## rsemmed 1.12.0 2023-10-24 [2] Bioconductor
## RSeqAn 1.22.0 2023-10-24 [2] Bioconductor
## rslurm 0.6.2 2023-02-24 [2] CRAN (R 4.3.1)
## rsm 2.10.4 2023-09-20 [2] CRAN (R 4.3.1)
## RSNNS 0.4-16 2023-05-09 [2] CRAN (R 4.3.1)
## rsnps 0.6.0 2023-06-23 [2] CRAN (R 4.3.1)
## Rsolnp 1.16 2015-12-28 [2] CRAN (R 4.3.1)
## rsparse 0.5.1 2022-09-11 [2] CRAN (R 4.3.1)
## RSpectra 0.16-1 2022-04-24 [2] CRAN (R 4.3.1)
## rSpectral 1.0.0.10 2023-01-18 [2] CRAN (R 4.3.1)
## rsq 2.6 2023-10-22 [2] CRAN (R 4.3.1)
## RSQLite 2.3.1 2023-04-03 [2] CRAN (R 4.3.1)
## rstan 2.32.3 2023-10-15 [2] CRAN (R 4.3.1)
## rstantools 2.3.1.1 2023-07-18 [2] CRAN (R 4.3.1)
## rstatix 0.7.2 2023-02-01 [2] CRAN (R 4.3.1)
## rstudioapi 0.15.0 2023-07-07 [2] CRAN (R 4.3.1)
## Rsubread 2.16.0 2023-10-24 [2] Bioconductor
## rsvd 1.0.5 2021-04-16 [2] CRAN (R 4.3.1)
## rsvg 2.6.0 2023-10-08 [2] CRAN (R 4.3.1)
## RSVSim 1.42.0 2023-10-24 [2] Bioconductor
## rSWeeP 1.14.0 2023-10-24 [2] Bioconductor
## RTCA 1.54.0 2023-10-24 [2] Bioconductor
## RTCGA 1.32.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.clinical 20151101.31.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.CNV 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.methylation 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.miRNASeq 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.mRNA 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.mutations 20151101.31.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.PANCAN12 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.rnaseq 20151101.31.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGA.RPPA 1.29.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## RTCGAToolbox 2.32.0 2023-10-24 [2] Bioconductor
## rTensor 1.4.8 2021-05-15 [2] CRAN (R 4.3.1)
## RTN 2.26.0 2023-10-24 [2] Bioconductor
## RTNduals 1.26.0 2023-10-24 [2] Bioconductor
## RTNsurvival 1.26.0 2023-10-24 [2] Bioconductor
## RTopper 1.48.0 2023-10-24 [2] Bioconductor
## Rtpca 1.12.0 2023-10-24 [2] Bioconductor
## rtracklayer 1.62.0 2023-10-24 [2] Bioconductor
## Rtreemix 1.64.0 2023-10-24 [2] Bioconductor
## RTriangle 1.6-0.12 2023-01-15 [2] CRAN (R 4.3.1)
## rTRM 1.40.0 2023-10-24 [2] Bioconductor
## rTRMui 1.40.0 2023-10-24 [2] Bioconductor
## Rtsne 0.16 2022-04-17 [2] CRAN (R 4.3.1)
## Rttf2pt1 1.3.12 2023-01-22 [2] CRAN (R 4.3.1)
## runibic 1.24.0 2023-10-24 [2] Bioconductor
## RUnit 0.4.32 2018-05-18 [2] CRAN (R 4.3.1)
## runonce 0.2.3 2021-10-02 [2] CRAN (R 4.3.1)
## ruv 0.9.7.1 2019-08-30 [2] CRAN (R 4.3.1)
## RUVcorr 1.34.0 2023-10-24 [2] Bioconductor
## RUVnormalize 1.36.0 2023-10-24 [2] Bioconductor
## RUVnormalizeData 1.21.0 2023-10-24 [2] Bioconductor
## RUVSeq 1.36.0 2023-10-24 [2] Bioconductor
## rvcheck 0.2.1 2021-10-22 [2] CRAN (R 4.3.1)
## RVenn 1.1.0 2019-07-18 [2] CRAN (R 4.3.1)
## rversions 2.1.2 2022-08-31 [2] CRAN (R 4.3.1)
## rvest 1.0.3 2022-08-19 [2] CRAN (R 4.3.1)
## rvinecopulib 0.6.3.1.1 2023-02-23 [2] CRAN (R 4.3.1)
## Rvisdiff 1.0.0 2023-10-24 [2] Bioconductor
## Rvmmin 2018-4.17.1 2021-04-18 [2] CRAN (R 4.3.1)
## RVS 1.24.0 2023-10-24 [2] Bioconductor
## Rwave 2.6-5 2022-10-21 [2] CRAN (R 4.3.1)
## RWeka 0.4-46 2023-03-07 [2] CRAN (R 4.3.1)
## RWekajars 3.9.3-2 2019-10-19 [2] CRAN (R 4.3.1)
## rWikiPathways 1.22.1 2023-10-24 [2] Bioconductor
## rworkflows 0.99.13 2023-09-14 [2] CRAN (R 4.3.1)
## s2 1.1.4 2023-05-17 [2] CRAN (R 4.3.1)
## S4Arrays 1.2.0 2023-10-24 [2] Bioconductor
## s4vd 1.1-1 2015-11-19 [2] CRAN (R 4.3.1)
## S4Vectors 0.40.0 2023-10-24 [2] Bioconductor
## sabre 0.4.3 2022-08-17 [2] CRAN (R 4.3.1)
## safe 3.42.0 2023-10-24 [2] Bioconductor
## sagenhaft 1.72.0 2023-10-24 [2] Bioconductor
## SAIGEgds 2.2.0 2023-10-24 [2] Bioconductor
## sampleClassifier 1.26.0 2023-10-24 [2] Bioconductor
## sampleClassifierData 1.25.0 2023-10-24 [2] Bioconductor
## sampling 2.9 2021-01-13 [2] CRAN (R 4.3.1)
## samr 3.0 2018-10-16 [2] CRAN (R 4.3.1)
## SamSPECTRAL 1.56.0 2023-10-24 [2] Bioconductor
## sandwich 3.0-2 2022-06-15 [2] CRAN (R 4.3.1)
## sangeranalyseR 1.12.0 2023-10-24 [2] Bioconductor
## sangerseqR 1.38.0 2023-10-24 [2] Bioconductor
## SANTA 2.38.0 2023-10-24 [2] Bioconductor
## SARC 1.0.0 2023-10-24 [2] Bioconductor
## sarks 1.14.0 2023-10-24 [2] Bioconductor
## sass 0.4.7 2023-07-15 [2] CRAN (R 4.3.1)
## satuRn 1.10.0 2023-10-24 [2] Bioconductor
## SAVER 1.1.2 2019-11-13 [2] CRAN (R 4.3.1)
## SBGNview 1.16.0 2023-10-24 [2] Bioconductor
## SBGNview.data 1.15.0 2023-10-24 [2] Bioconductor
## SBMLR 1.98.0 2023-10-24 [2] Bioconductor
## SC3 1.30.0 2023-10-24 [2] Bioconductor
## Scale4C 1.24.0 2023-10-24 [2] Bioconductor
## ScaledMatrix 1.10.0 2023-10-24 [2] Bioconductor
## scales 1.2.1 2022-08-20 [2] CRAN (R 4.3.1)
## scam 1.2-14 2023-04-14 [2] CRAN (R 4.3.1)
## SCAN.UPC 2.44.0 2023-10-24 [2] Bioconductor
## scanMiR 1.8.0 2023-10-24 [2] Bioconductor
## scanMiRApp 1.8.0 2023-10-24 [2] Bioconductor
## scanMiRData 1.7.1 2023-10-24 [2] Bioconductor
## scAnnotatR 1.8.0 2023-10-24 [2] Bioconductor
## scAnnotatR.models 0.99.10 2023-10-25 [2] Bioconductor
## SCANVIS 1.16.0 2023-10-24 [2] Bioconductor
## SCArray 1.10.0 2023-10-24 [2] Bioconductor
## SCArray.sat 1.2.0 2023-10-24 [2] Bioconductor
## scATAC.Explorer 1.7.0 2023-10-24 [2] Bioconductor
## SCATE 1.12.0 2023-10-24 [2] Bioconductor
## SCATEData 1.11.1 2023-10-24 [2] Bioconductor
## scater 1.30.0 2023-10-24 [2] Bioconductor
## scatterHatch 1.8.0 2023-10-24 [2] Bioconductor
## scattermore 1.2 2023-06-12 [2] CRAN (R 4.3.1)
## scatterpie 0.2.1 2023-06-07 [2] CRAN (R 4.3.1)
## scatterplot3d 0.3-44 2023-05-05 [2] CRAN (R 4.3.1)
## scBFA 1.16.0 2023-10-24 [2] Bioconductor
## SCBN 1.20.0 2023-10-24 [2] Bioconductor
## scBubbletree 1.4.0 2023-10-24 [2] Bioconductor
## scCB2 1.12.0 2023-10-24 [2] Bioconductor
## scClassify 1.14.0 2023-10-24 [2] Bioconductor
## sccomp 1.6.0 2023-10-24 [2] Bioconductor
## scDataviz 1.12.0 2023-10-24 [2] Bioconductor
## scDblFinder 1.16.0 2023-10-24 [2] Bioconductor
## scDD 1.26.0 2023-10-24 [2] Bioconductor
## scDDboost 1.4.0 2023-10-24 [2] Bioconductor
## scde 2.30.0 2023-10-24 [2] Bioconductor
## scDesign3 1.0.0 2023-10-24 [2] Bioconductor
## scds 1.18.0 2023-10-24 [2] Bioconductor
## SCFA 1.12.0 2023-10-24 [2] Bioconductor
## scFeatureFilter 1.22.0 2023-10-24 [2] Bioconductor
## scFeatures 1.2.0 2023-10-24 [2] Bioconductor
## scGPS 1.16.0 2023-10-24 [2] Bioconductor
## schex 1.16.0 2023-10-24 [2] Bioconductor
## scHOT 1.14.0 2023-10-24 [2] Bioconductor
## scico 1.5.0 2023-08-14 [2] CRAN (R 4.3.1)
## scider 1.0.0 2023-10-24 [2] Bioconductor
## scifer 1.4.0 2023-10-24 [2] Bioconductor
## SCLCBam 1.33.0 2023-10-24 [2] Bioconductor
## scmap 1.24.0 2023-10-24 [2] Bioconductor
## scMerge 1.18.0 2023-10-24 [2] Bioconductor
## scMET 1.4.0 2023-10-24 [2] Bioconductor
## scmeth 1.22.0 2023-10-24 [2] Bioconductor
## scMultiome 1.1.2 2023-10-24 [2] Bioconductor
## SCnorm 1.24.0 2023-10-24 [2] Bioconductor
## scone 1.26.0 2023-10-24 [2] Bioconductor
## Sconify 1.22.0 2023-10-24 [2] Bioconductor
## SCOPE 1.14.0 2023-10-24 [2] Bioconductor
## scoreInvHap 1.24.0 2023-10-24 [2] Bioconductor
## scp 1.12.0 2023-10-24 [2] Bioconductor
## scPCA 1.16.0 2023-10-24 [2] Bioconductor
## scpdata 1.9.2 2023-10-24 [2] Bioconductor
## scPipe 2.2.0 2023-10-24 [2] Bioconductor
## scran 1.30.0 2023-10-24 [2] Bioconductor
## scReClassify 1.8.0 2023-10-24 [2] Bioconductor
## scRecover 1.18.0 2023-10-24 [2] Bioconductor
## screenCounter 1.2.0 2023-10-24 [2] Bioconductor
## ScreenR 1.4.0 2023-10-24 [2] Bioconductor
## scRepertoire 1.12.0 2023-10-24 [2] Bioconductor
## scrime 1.3.5 2018-12-01 [2] CRAN (R 4.3.1)
## scRNAseq 2.15.0 2023-10-24 [2] Bioconductor
## scRNAseqApp 1.2.0 2023-10-24 [2] Bioconductor
## scruff 1.20.0 2023-10-24 [2] Bioconductor
## scry 1.14.0 2023-10-24 [2] Bioconductor
## scrypt 0.1.6 2023-01-29 [2] CRAN (R 4.3.1)
## scs 3.2.4 2023-04-11 [2] CRAN (R 4.3.1)
## scShapes 1.8.0 2023-10-24 [2] Bioconductor
## scTensor 2.12.0 2023-10-24 [2] Bioconductor
## scTGIF 1.16.0 2023-10-24 [2] Bioconductor
## scTHI 1.14.0 2023-10-24 [2] Bioconductor
## scTHI.data 1.13.0 2023-10-24 [2] Bioconductor
## sctransform 0.4.1 2023-10-19 [2] CRAN (R 4.3.1)
## scTreeViz 1.8.0 2023-10-24 [2] Bioconductor
## scuttle 1.12.0 2023-10-24 [2] Bioconductor
## scviR 1.2.0 2023-10-24 [2] Bioconductor
## sda 1.3.8 2021-11-21 [2] CRAN (R 4.3.1)
## SDAMS 1.22.0 2023-10-24 [2] Bioconductor
## sechm 1.10.0 2023-10-24 [2] Bioconductor
## seewave 2.2.3 2023-10-19 [2] CRAN (R 4.3.1)
## segmented 1.6-4 2023-04-13 [2] CRAN (R 4.3.1)
## segmenter 1.8.0 2023-10-24 [2] Bioconductor
## segmentSeq 2.36.0 2023-10-24 [2] Bioconductor
## selectKSigs 1.14.0 2023-10-24 [2] Bioconductor
## selectr 0.4-2 2019-11-20 [2] CRAN (R 4.3.1)
## SELEX 1.34.0 2023-10-24 [2] Bioconductor
## SemDist 1.36.0 2023-10-24 [2] Bioconductor
## semisup 1.26.0 2023-10-24 [2] Bioconductor
## sendmailR 1.4-0 2023-01-12 [2] CRAN (R 4.3.1)
## SEPIRA 1.22.0 2023-10-24 [2] Bioconductor
## seq.hotSPOT 1.2.0 2023-10-24 [2] Bioconductor
## seq2pathway 1.34.0 2023-10-24 [2] Bioconductor
## seq2pathway.data 1.33.0 2023-10-24 [2] Bioconductor
## seqArchR 1.6.0 2023-10-24 [2] Bioconductor
## seqArchRplus 1.2.0 2023-10-24 [2] Bioconductor
## SeqArray 1.42.0 2023-10-24 [2] Bioconductor
## seqbias 1.50.0 2023-10-24 [2] Bioconductor
## seqc 1.35.0 2023-10-24 [2] Bioconductor
## seqCAT 1.24.0 2023-10-24 [2] Bioconductor
## seqCNA 1.48.0 2023-10-24 [2] Bioconductor
## seqCNA.annot 1.37.0 2023-10-24 [2] Bioconductor
## seqcombo 1.24.0 2023-10-24 [2] Bioconductor
## SeqGate 1.12.0 2023-10-24 [2] Bioconductor
## SeqGSEA 1.42.0 2023-10-24 [2] Bioconductor
## seqinr 4.2-30 2023-04-05 [2] CRAN (R 4.3.1)
## seqLogo 1.68.0 2023-10-24 [2] Bioconductor
## seqmagick 0.1.6 2023-06-27 [2] CRAN (R 4.3.1)
## seqminer 9.1 2023-09-02 [2] CRAN (R 4.3.1)
## seqpac 1.3.0 2023-10-24 [2] Bioconductor
## seqPattern 1.34.0 2023-10-24 [2] Bioconductor
## seqsetvis 1.22.0 2023-10-24 [2] Bioconductor
## SeqSQC 1.24.0 2023-10-24 [2] Bioconductor
## seqTools 1.36.0 2023-10-24 [2] Bioconductor
## sequencing 1.27.0 2023-10-24 [2] Bioconductor
## SeqVarTools 1.40.0 2023-10-24 [2] Bioconductor
## seriation 1.5.1 2023-07-20 [2] CRAN (R 4.3.1)
## serumStimulation 1.37.0 2023-10-24 [2] Bioconductor
## servr 0.27 2023-05-02 [2] CRAN (R 4.3.1)
## sesame 1.20.0 2023-10-24 [2] Bioconductor
## sesameData 1.19.0 2023-10-24 [2] Bioconductor
## sessioninfo 1.2.2 2021-12-06 [2] CRAN (R 4.3.1)
## SEtools 1.16.0 2023-10-24 [2] Bioconductor
## setRNG 2022.4-1 2022-04-03 [2] CRAN (R 4.3.1)
## sets 1.0-24 2023-03-07 [2] CRAN (R 4.3.1)
## settings 0.2.7 2021-05-07 [2] CRAN (R 4.3.1)
## Seurat 4.4.0 2023-09-28 [2] CRAN (R 4.3.1)
## SeuratObject 4.1.4 2023-09-26 [2] CRAN (R 4.3.1)
## sevenbridges 1.32.0 2023-10-24 [2] Bioconductor
## sevenC 1.22.0 2023-10-24 [2] Bioconductor
## seventyGeneData 1.37.4 2023-10-24 [2] Bioconductor
## sf 1.0-14 2023-07-11 [2] CRAN (R 4.3.1)
## sfarrow 0.4.1 2021-10-27 [2] CRAN (R 4.3.1)
## SFEData 1.3.0 2023-10-24 [2] Bioconductor
## sfsmisc 1.1-16 2023-08-10 [2] CRAN (R 4.3.1)
## sftime 0.2-0 2022-03-17 [2] CRAN (R 4.3.1)
## SGCP 1.2.0 2023-10-24 [2] Bioconductor
## sgeostat 1.0-27 2016-02-03 [2] CRAN (R 4.3.1)
## SGSeq 1.36.0 2023-10-24 [2] Bioconductor
## shades 1.4.0 2019-08-02 [2] CRAN (R 4.3.1)
## shadowtext 0.1.2 2022-04-22 [2] CRAN (R 4.3.1)
## shape 1.4.6 2021-05-19 [2] CRAN (R 4.3.1)
## SharedObject 1.16.0 2023-10-24 [2] Bioconductor
## shiny 1.7.5.1 2023-10-14 [2] CRAN (R 4.3.1)
## shinyAce 0.4.2 2022-05-06 [2] CRAN (R 4.3.1)
## shinyalert 3.0.0 2021-12-20 [2] CRAN (R 4.3.1)
## shinyBS 0.61.1 2022-04-17 [2] CRAN (R 4.3.1)
## shinybusy 0.3.1 2022-05-10 [2] CRAN (R 4.3.1)
## shinycssloaders 1.0.0 2020-07-28 [2] CRAN (R 4.3.1)
## shinycustomloader 0.9.0 2018-03-27 [2] CRAN (R 4.3.1)
## shinyCyJS 1.0.0 2023-09-26 [2] CRAN (R 4.3.1)
## shinydashboard 0.7.2 2021-09-30 [2] CRAN (R 4.3.1)
## shinydashboardPlus 2.0.3 2021-09-15 [2] CRAN (R 4.3.1)
## shinyepico 1.10.0 2023-10-24 [2] Bioconductor
## shinyFeedback 0.4.0 2021-09-23 [2] CRAN (R 4.3.1)
## shinyFiles 0.9.3 2022-08-19 [2] CRAN (R 4.3.1)
## shinyHeatmaply 0.2.0 2020-04-06 [2] CRAN (R 4.3.1)
## shinyhelper 0.3.2 2019-11-09 [2] CRAN (R 4.3.1)
## shinyjqui 0.4.1 2022-02-03 [2] CRAN (R 4.3.1)
## shinyjs 2.1.0 2021-12-23 [2] CRAN (R 4.3.1)
## shinylogs 0.2.1 2022-04-18 [2] CRAN (R 4.3.1)
## shinymanager 1.0.410 2022-09-27 [2] CRAN (R 4.3.1)
## shinyMatrix 0.6.0 2021-05-20 [2] CRAN (R 4.3.1)
## shinymeta 0.2.0.3 2021-11-17 [2] CRAN (R 4.3.1)
## shinyMethyl 1.38.0 2023-10-24 [2] Bioconductor
## shinyMethylData 1.21.0 2023-10-24 [2] Bioconductor
## shinypanel 0.1.5 2022-03-25 [2] CRAN (R 4.3.1)
## shinyscreenshot 0.2.1 2023-08-21 [2] CRAN (R 4.3.1)
## shinytest 1.5.3 2023-03-25 [2] CRAN (R 4.3.1)
## shinytest2 0.3.1 2023-08-26 [2] CRAN (R 4.3.1)
## shinythemes 1.2.0 2021-01-25 [2] CRAN (R 4.3.1)
## shinytitle 0.1.0 2021-06-16 [2] CRAN (R 4.3.1)
## shinytoastr 2.2.0 2023-08-30 [2] CRAN (R 4.3.1)
## shinyTree 0.3.1 2023-08-07 [2] CRAN (R 4.3.1)
## shinyvalidate 0.1.3 2023-10-04 [2] CRAN (R 4.3.1)
## shinyWidgets 0.8.0 2023-08-30 [2] CRAN (R 4.3.1)
## ShortRead 1.60.0 2023-10-24 [2] Bioconductor
## showimage 1.0.0 2018-01-24 [2] CRAN (R 4.3.1)
## showtext 0.9-6 2023-05-03 [2] CRAN (R 4.3.1)
## showtextdb 3.0 2020-06-04 [2] CRAN (R 4.3.1)
## SIAMCAT 2.6.0 2023-10-24 [2] Bioconductor
## SICtools 1.32.0 2023-10-24 [2] Bioconductor
## SIFT.Hsapiens.dbSNP132 1.0.2 2023-06-20 [2] Bioconductor
## SIFT.Hsapiens.dbSNP137 1.0.0 2023-06-20 [2] Bioconductor
## SigCheck 2.34.0 2023-10-24 [2] Bioconductor
## sigclust 1.1.0.1 2022-06-27 [2] CRAN (R 4.3.1)
## sigFeature 1.20.0 2023-10-24 [2] Bioconductor
## SigFuge 1.40.0 2023-10-24 [2] Bioconductor
## siggenes 1.76.0 2023-10-24 [2] Bioconductor
## sights 1.28.0 2023-10-24 [2] Bioconductor
## sigmajs 0.1.5 2020-06-18 [2] CRAN (R 4.3.1)
## Signac 1.11.0 2023-10-13 [2] CRAN (R 4.3.1)
## signal 0.7-7 2021-05-25 [2] CRAN (R 4.3.1)
## signalHsmm 1.5 2018-11-15 [2] CRAN (R 4.3.1)
## signatureSearch 1.16.0 2023-10-24 [2] Bioconductor
## signatureSearchData 1.15.0 2023-10-24 [2] Bioconductor
## signeR 2.4.0 2023-10-24 [2] Bioconductor
## signifinder 1.4.0 2023-10-24 [2] Bioconductor
## SigsPack 1.16.0 2023-10-24 [2] Bioconductor
## sigsquared 1.34.0 2023-10-24 [2] local
## SIM 1.72.0 2023-10-24 [2] Bioconductor
## SIMAT 1.34.0 2023-10-24 [2] Bioconductor
## SimBenchData 1.9.0 2023-10-24 [2] Bioconductor
## SimBindProfiles 1.40.0 2023-10-24 [2] Bioconductor
## SimBu 1.4.0 2023-10-24 [2] Bioconductor
## SIMD 1.20.0 2023-10-24 [2] Bioconductor
## SimFFPE 1.14.0 2023-10-24 [2] Bioconductor
## similaRpeak 1.34.0 2023-10-24 [2] Bioconductor
## SIMLR 1.28.0 2023-10-24 [2] Bioconductor
## simona 1.0.0 2023-10-24 [2] Bioconductor
## simpIntLists 1.37.0 2023-10-24 [2] Bioconductor
## simpleCache 0.4.2 2021-04-17 [2] CRAN (R 4.3.1)
## simpleSeg 1.4.0 2023-10-24 [2] Bioconductor
## simpleSingleCell 1.27.0 2023-10-24 [2] Bioconductor
## simplifyEnrichment 1.12.0 2023-10-24 [2] Bioconductor
## sincell 1.34.0 2023-10-24 [2] Bioconductor
## single 1.6.0 2023-10-24 [2] Bioconductor
## Single.mTEC.Transcriptomes 1.29.0 2023-10-24 [2] Bioconductor
## SingleCellExperiment 1.24.0 2023-10-24 [2] Bioconductor
## SingleCellMultiModal 1.13.15 2023-10-24 [2] Bioconductor
## SingleCellSignalR 1.14.0 2023-10-24 [2] Bioconductor
## singleCellTK 2.12.0 2023-10-24 [2] Bioconductor
## SingleMoleculeFootprinting 1.10.0 2023-10-24 [2] Bioconductor
## SingleMoleculeFootprintingData 1.9.0 2023-10-24 [2] Bioconductor
## SingleR 2.4.0 2023-10-24 [2] Bioconductor
## SingleRBook 1.12.0 2023-10-25 [2] Bioconductor
## singscore 1.22.0 2023-10-24 [2] Bioconductor
## SingscoreAMLMutations 1.19.0 2023-10-24 [2] Bioconductor
## SiPSiC 1.2.0 2023-10-24 [2] Bioconductor
## SISPA 1.32.0 2023-10-24 [2] Bioconductor
## sitadela 1.10.0 2023-10-24 [2] Bioconductor
## sitePath 1.18.0 2023-10-24 [2] Bioconductor
## sitmo 2.0.2 2021-10-13 [2] CRAN (R 4.3.1)
## sizepower 1.72.0 2023-10-24 [2] Bioconductor
## sjlabelled 1.2.0 2022-04-10 [2] CRAN (R 4.3.1)
## sjmisc 2.8.9 2021-12-03 [2] CRAN (R 4.3.1)
## skewr 1.34.0 2023-10-24 [2] Bioconductor
## skmeans 0.2-16 2023-09-23 [2] CRAN (R 4.3.1)
## slalom 1.24.0 2023-10-24 [2] Bioconductor
## slam 0.1-50 2022-01-08 [2] CRAN (R 4.3.1)
## slickR 0.6.0 2022-12-21 [2] CRAN (R 4.3.1)
## slider 0.3.1 2023-10-12 [2] CRAN (R 4.3.1)
## slingshot 2.10.0 2023-10-24 [2] Bioconductor
## SLqPCR 1.68.0 2023-10-24 [2] Bioconductor
## sm 2.2-5.7.1 2022-07-04 [2] CRAN (R 4.3.1)
## SMAD 1.18.0 2023-10-24 [2] Bioconductor
## SMAP 1.66.0 2023-10-24 [2] Bioconductor
## SmartSVA 0.1.3 2017-05-28 [2] CRAN (R 4.3.1)
## smatr 3.4-8 2018-03-18 [2] CRAN (R 4.3.1)
## SMITE 1.30.0 2023-10-24 [2] Bioconductor
## smokingMouse 0.99.91 2023-10-24 [2] Bioconductor
## smoof 1.6.0.3 2023-03-10 [2] CRAN (R 4.3.1)
## smoother 1.1 2015-04-16 [2] CRAN (R 4.3.1)
## smoothie 1.0-3 2021-05-31 [2] CRAN (R 4.3.1)
## SmoothWin 3.0.0 2019-07-27 [2] CRAN (R 4.3.1)
## smurf 1.1.5 2023-03-22 [2] CRAN (R 4.3.1)
## SMVar 1.3.4 2022-04-12 [2] CRAN (R 4.3.1)
## sn 2.1.1 2023-04-04 [2] CRAN (R 4.3.1)
## sna 2.7-1 2023-01-24 [2] CRAN (R 4.3.1)
## SNAData 1.47.0 2023-10-24 [2] Bioconductor
## SNAGEE 1.42.0 2023-10-24 [2] Bioconductor
## SNAGEEdata 1.37.0 2023-10-24 [2] Bioconductor
## snakecase 0.11.1 2023-08-27 [2] CRAN (R 4.3.1)
## snapCGH 1.72.0 2023-10-24 [2] Bioconductor
## snapcount 1.14.0 2023-10-24 [2] Bioconductor
## SNFtool 2.3.1 2021-06-11 [2] CRAN (R 4.3.1)
## snifter 1.12.0 2023-10-24 [2] Bioconductor
## snm 1.50.0 2023-10-24 [2] Bioconductor
## snow 0.4-4 2021-10-27 [2] CRAN (R 4.3.1)
## SnowballC 0.7.1 2023-04-25 [2] CRAN (R 4.3.1)
## snowfall 1.84-6.2 2022-07-05 [2] CRAN (R 4.3.1)
## SNPediaR 1.28.0 2023-10-24 [2] Bioconductor
## SNPhood 1.32.0 2023-10-24 [2] Bioconductor
## SNPhoodData 1.31.0 2023-10-24 [2] Bioconductor
## SNPlocs.Hsapiens.dbSNP144.GRCh37 0.99.20 2023-06-20 [2] Bioconductor
## SNPlocs.Hsapiens.dbSNP144.GRCh38 0.99.20 2023-06-20 [2] Bioconductor
## SNPlocs.Hsapiens.dbSNP150.GRCh38 0.99.20 2023-06-20 [2] Bioconductor
## SNPlocs.Hsapiens.dbSNP155.GRCh37 0.99.24 2023-06-21 [2] Bioconductor
## SNPlocs.Hsapiens.dbSNP155.GRCh38 0.99.24 2023-06-20 [2] Bioconductor
## SNPRelate 1.36.0 2023-10-24 [2] Bioconductor
## snpStats 1.52.0 2023-10-24 [2] Bioconductor
## softImpute 1.4-1 2021-05-09 [2] CRAN (R 4.3.1)
## soGGi 1.34.0 2023-10-24 [2] Bioconductor
## solrium 1.2.0 2021-05-19 [2] CRAN (R 4.3.1)
## som 0.3-5.1 2016-07-06 [2] CRAN (R 4.3.1)
## SomaDataIO 6.0.0 2023-03-15 [2] CRAN (R 4.3.1)
## SomaScan.db 0.99.7 2023-10-25 [2] Bioconductor
## SomatiCAData 1.39.0 2023-10-24 [2] Bioconductor
## SomaticCancerAlterations 1.37.0 2023-10-24 [2] Bioconductor
## SomaticSignatures 2.38.0 2023-10-24 [2] Bioconductor
## SOMbrero 1.4-1 2022-01-03 [2] CRAN (R 4.3.1)
## SOMNiBUS 1.10.0 2023-10-24 [2] Bioconductor
## sonicLength 1.4.7 2021-09-20 [2] CRAN (R 4.3.1)
## sortable 0.5.0 2023-03-26 [2] CRAN (R 4.3.1)
## SoupX 1.6.2 2022-11-01 [2] CRAN (R 4.3.1)
## sourcetools 0.1.7-1 2023-02-01 [2] CRAN (R 4.3.1)
## sp 2.1-1 2023-10-16 [2] CRAN (R 4.3.1)
## SpacePAC 1.40.0 2023-10-24 [2] Bioconductor (R 4.3.1)
## spacetime 1.3-0 2023-04-05 [2] CRAN (R 4.3.1)
## spam 2.10-0 2023-10-23 [2] CRAN (R 4.3.1)
## Spaniel 1.16.0 2023-10-24 [2] Bioconductor
## sparkline 2.0 2016-11-12 [2] CRAN (R 4.3.1)
## sparklyr 1.8.3 2023-09-02 [2] CRAN (R 4.3.1)
## sparrow 1.8.0 2023-10-24 [2] Bioconductor
## SparseArray 1.2.0 2023-10-24 [2] Bioconductor
## SparseDC 0.1.17 2018-01-04 [2] CRAN (R 4.3.1)
## sparseDOSSA 1.26.0 2023-10-24 [2] Bioconductor
## sparseLDA 0.1-9 2016-09-22 [2] CRAN (R 4.3.1)
## SparseM 1.81 2021-02-18 [2] CRAN (R 4.3.1)
## sparseMatrixStats 1.14.0 2023-10-24 [2] Bioconductor
## sparseMVN 0.2.2 2021-10-25 [2] CRAN (R 4.3.1)
## sparsenetgls 1.20.0 2023-10-24 [2] Bioconductor
## sparsepca 0.1.2 2018-04-11 [2] CRAN (R 4.3.1)
## SparseSignatures 2.12.0 2023-10-24 [2] Bioconductor
## sparsesvd 0.2-2 2023-01-14 [2] CRAN (R 4.3.1)
## spaSim 1.4.0 2023-10-24 [2] Bioconductor
## SPAtest 3.1.2 2020-09-04 [2] CRAN (R 4.3.1)
## spatial 7.3-17 2023-07-20 [3] CRAN (R 4.3.1)
## SpatialCPie 1.18.0 2023-10-24 [2] Bioconductor
## SpatialDatasets 0.99.4 2023-10-24 [2] Bioconductor
## spatialDE 1.8.0 2023-10-24 [2] Bioconductor
## SpatialDecon 1.12.0 2023-10-24 [2] Bioconductor
## spatialDmelxsim 1.7.1 2023-10-24 [2] Bioconductor
## SpatialExperiment 1.12.0 2023-10-24 [2] Bioconductor
## SpatialExtremes 2.1-0 2022-04-19 [2] CRAN (R 4.3.1)
## SpatialFeatureExperiment 1.4.0 2023-10-24 [2] Bioconductor
## spatialHeatmap 2.8.0 2023-10-24 [2] Bioconductor
## spatialLIBD 1.13.6 2023-10-24 [2] Bioconductor
## SpatialOmicsOverlay 1.2.0 2023-10-24 [2] Bioconductor
## SpatialTools 1.0.5 2023-07-18 [2] CRAN (R 4.3.1)
## spatstat 3.0-6 2023-05-17 [2] CRAN (R 4.3.1)
## spatstat.data 3.0-3 2023-10-24 [2] CRAN (R 4.3.1)
## spatstat.explore 3.2-5 2023-10-22 [2] CRAN (R 4.3.1)
## spatstat.geom 3.2-7 2023-10-20 [2] CRAN (R 4.3.1)
## spatstat.linnet 3.1-1 2023-05-15 [2] CRAN (R 4.3.1)
## spatstat.model 3.2-8 2023-10-23 [2] CRAN (R 4.3.1)
## spatstat.random 3.2-1 2023-10-21 [2] CRAN (R 4.3.1)
## spatstat.sparse 3.0-3 2023-10-24 [2] CRAN (R 4.3.1)
## spatstat.utils 3.0-4 2023-10-24 [2] CRAN (R 4.3.1)
## spatzie 1.8.0 2023-10-24 [2] Bioconductor
## spBayes 0.4-6 2022-05-17 [2] CRAN (R 4.3.1)
## spData 2.3.0 2023-07-06 [2] CRAN (R 4.3.1)
## spdep 1.2-8 2023-02-28 [2] CRAN (R 4.3.1)
## spdl 0.0.5 2023-06-18 [2] CRAN (R 4.3.1)
## speaq 2.7.0 2022-05-23 [2] CRAN (R 4.3.1)
## speckle 1.2.0 2023-10-24 [2] Bioconductor
## specL 1.36.0 2023-10-24 [2] Bioconductor
## SpeCond 1.56.0 2023-10-24 [2] Bioconductor
## Spectra 1.12.0 2023-10-24 [2] Bioconductor
## SpectralTAD 1.18.0 2023-10-24 [2] Bioconductor
## speedglm 0.3-5 2023-05-06 [2] CRAN (R 4.3.1)
## spelling 2.2.1 2023-03-22 [2] CRAN (R 4.3.1)
## SPEM 1.42.0 2023-10-24 [2] Bioconductor
## SPIA 2.54.0 2023-10-24 [2] Bioconductor
## SPIAT 1.4.0 2023-10-24 [2] Bioconductor
## spicyR 1.14.0 2023-10-24 [2] Bioconductor
## spicyWorkflow 1.3.0 2023-10-24 [2] Bioconductor
## SpidermiR 1.32.0 2023-10-24 [2] Bioconductor
## SpikeIn 1.43.2 2023-10-24 [2] Bioconductor
## SpikeInSubset 1.41.2 2023-10-24 [2] Bioconductor
## spikeLI 2.62.0 2023-10-24 [2] Bioconductor
## spiky 1.8.0 2023-10-24 [2] Bioconductor
## spkTools 1.58.0 2023-10-24 [2] Bioconductor
## splancs 2.01-44 2023-08-21 [2] CRAN (R 4.3.1)
## splatter 1.26.0 2023-10-24 [2] Bioconductor
## SpliceWiz 1.4.0 2023-10-24 [2] Bioconductor
## SplicingFactory 1.10.0 2023-10-24 [2] Bioconductor
## SplicingGraphs 1.42.0 2023-10-24 [2] Bioconductor
## splines 4.3.1 2023-06-20 [3] local
## splines2 0.5.1 2023-08-19 [2] CRAN (R 4.3.1)
## splineTimeR 1.30.0 2023-10-24 [2] Bioconductor
## SPLINTER 1.28.0 2023-10-24 [2] Bioconductor
## splitstackshape 1.4.8 2019-04-21 [2] CRAN (R 4.3.1)
## splots 1.68.0 2023-10-24 [2] Bioconductor
## splus2R 1.3-3 2021-01-30 [2] CRAN (R 4.3.1)
## SPONGE 1.24.0 2023-10-24 [2] Bioconductor
## SpotClean 1.4.0 2023-10-24 [2] Bioconductor
## SPOTlight 1.6.0 2023-10-24 [2] Bioconductor
## spqn 1.14.0 2023-10-24 [2] Bioconductor
## spqnData 1.13.0 2023-10-24 [2] Bioconductor
## spsComps 0.3.3.0 2023-07-12 [2] CRAN (R 4.3.1)
## SPsimSeq 1.12.0 2023-10-24 [2] Bioconductor
## spsUtil 0.2.2 2021-10-30 [2] CRAN (R 4.3.1)
## SQLDataFrame 1.16.0 2023-10-24 [2] Bioconductor
## sqldf 0.4-11 2017-06-28 [2] CRAN (R 4.3.1)
## SQN 1.0.6 2022-06-10 [2] CRAN (R 4.3.1)
## SQUADD 1.52.0 2023-10-24 [2] Bioconductor
## SQUAREM 2021.1 2021-01-13 [2] CRAN (R 4.3.1)
## squash 1.0.9 2020-02-20 [2] CRAN (R 4.3.1)
## sRACIPE 1.18.0 2023-10-24 [2] Bioconductor
## SRAdb 1.64.0 2023-10-24 [2] Bioconductor
## srnadiff 1.22.0 2023-10-24 [2] Bioconductor
## ssc 2.1-0 2019-12-15 [2] CRAN (R 4.3.1)
## sscore 1.74.0 2023-10-24 [2] Bioconductor
## sscu 2.32.0 2023-10-24 [2] Bioconductor
## sSeq 1.40.0 2023-10-24 [2] Bioconductor
## ssize 1.76.0 2023-10-24 [2] Bioconductor
## sSNAPPY 1.6.0 2023-10-24 [2] Bioconductor
## ssPATHS 1.16.0 2023-10-24 [2] Bioconductor
## ssrch 1.18.0 2023-10-24 [2] Bioconductor
## ssviz 1.36.0 2023-10-24 [2] Bioconductor
## st 1.2.7 2021-11-27 [2] CRAN (R 4.3.1)
## stable 1.1.6 2022-03-02 [2] CRAN (R 4.3.1)
## stabledist 0.7-1 2016-09-12 [2] CRAN (R 4.3.1)
## stabs 0.6-4 2021-01-29 [2] CRAN (R 4.3.1)
## stageR 1.24.0 2023-10-24 [2] Bioconductor
## standR 1.6.0 2023-10-24 [2] Bioconductor
## StanHeaders 2.26.28 2023-09-07 [2] CRAN (R 4.3.1)
## staRank 1.44.0 2023-10-24 [2] Bioconductor
## StarBioTrek 1.28.0 2023-10-24 [2] Bioconductor
## stars 0.6-4 2023-09-11 [2] CRAN (R 4.3.1)
## startupmsg 0.9.6 2019-03-11 [2] CRAN (R 4.3.1)
## statebins 1.4.0 2020-07-08 [2] CRAN (R 4.3.1)
## STATegRa 1.38.0 2023-10-24 [2] Bioconductor
## Statial 1.4.0 2023-10-24 [2] Bioconductor
## statip 0.2.3 2019-11-17 [2] CRAN (R 4.3.1)
## statmod 1.5.0 2023-01-06 [2] CRAN (R 4.3.1)
## statnet.common 4.9.0 2023-05-24 [2] CRAN (R 4.3.1)
## stats * 4.3.1 2023-06-20 [3] local
## stats4 4.3.1 2023-06-20 [3] local
## statTarget 1.32.0 2023-10-24 [2] Bioconductor
## STdeconvolve 1.6.0 2023-10-24 [2] Bioconductor
## stemHypoxia 1.37.0 2023-10-24 [2] Bioconductor
## stepNorm 1.74.0 2023-10-24 [2] Bioconductor
## STexampleData 1.9.0 2023-10-24 [2] Bioconductor
## stJoincount 1.4.0 2023-10-24 [2] Bioconductor
## stjudem 1.41.1 2023-10-24 [2] Bioconductor
## stopwords 2.3 2021-10-28 [2] CRAN (R 4.3.1)
## storr 1.2.5 2020-12-01 [2] CRAN (R 4.3.1)
## strandCheckR 1.20.0 2023-10-24 [2] Bioconductor
## strawr 0.0.91 2023-03-29 [2] CRAN (R 4.3.1)
## Streamer 1.48.0 2023-10-24 [2] Bioconductor
## strex 1.6.0 2023-01-21 [2] CRAN (R 4.3.1)
## STRINGdb 2.14.0 2023-10-24 [2] Bioconductor
## stringdist 0.9.10 2022-11-07 [2] CRAN (R 4.3.1)
## stringfish 0.15.8 2023-05-30 [2] CRAN (R 4.3.1)
## stringi 1.7.12 2023-01-11 [2] CRAN (R 4.3.1)
## stringr 1.5.0 2022-12-02 [2] CRAN (R 4.3.1)
## STROMA4 1.26.0 2023-10-24 [2] Bioconductor
## strucchange 1.5-3 2022-06-15 [2] CRAN (R 4.3.1)
## struct 1.14.0 2023-10-24 [2] Bioconductor
## Structstrings 1.18.0 2023-10-24 [2] Bioconductor
## structToolbox 1.14.0 2023-10-24 [2] Bioconductor
## StructuralVariantAnnotation 1.18.0 2023-10-24 [2] Bioconductor
## styler 1.10.2 2023-08-29 [2] CRAN (R 4.3.1)
## SubCellBarCode 1.18.0 2023-10-24 [2] Bioconductor
## subplex 1.8 2022-04-12 [2] CRAN (R 4.3.1)
## subSeq 1.32.0 2023-10-24 [2] Bioconductor
## subspace 1.0.4 2015-10-12 [2] CRAN (R 4.3.1)
## SUITOR 1.4.0 2023-10-24 [2] Bioconductor
## SummarizedBenchmark 2.20.0 2023-10-24 [2] Bioconductor
## SummarizedExperiment 1.32.0 2023-10-24 [2] Bioconductor
## summarytools 1.0.1 2022-05-20 [2] CRAN (R 4.3.1)
## Summix 2.8.0 2023-10-24 [2] Bioconductor
## superheat 0.1.0 2017-02-04 [2] CRAN (R 4.3.1)
## SuperLearner 2.0-28.1 2023-07-18 [2] CRAN (R 4.3.1)
## supersigs 1.10.0 2023-10-24 [2] Bioconductor
## SuppDists 1.1-9.7 2022-01-03 [2] CRAN (R 4.3.1)
## supraHex 1.40.0 2023-10-24 [2] Bioconductor
## surfaltr 1.8.0 2023-10-24 [2] Bioconductor
## survcomp 1.52.0 2023-10-24 [2] Bioconductor
## survey 4.2-1 2023-05-03 [2] CRAN (R 4.3.1)
## survival 3.5-7 2023-08-14 [3] CRAN (R 4.3.1)
## survivalAnalysis 0.3.0 2022-02-11 [2] CRAN (R 4.3.1)
## survivalROC 1.0.3.1 2022-12-05 [2] CRAN (R 4.3.1)
## survivalsvm 0.0.5 2018-02-05 [2] CRAN (R 4.3.1)
## survminer 0.4.9 2021-03-09 [2] CRAN (R 4.3.1)
## survMisc 0.5.6 2022-04-07 [2] CRAN (R 4.3.1)
## survtype 1.18.0 2023-10-24 [2] Bioconductor
## sva 3.50.0 2023-10-24 [2] Bioconductor
## svaNUMT 1.8.0 2023-10-24 [2] Bioconductor
## svaRetro 1.8.0 2023-10-24 [2] Bioconductor
## svd 0.5.4.1 2023-07-23 [2] CRAN (R 4.3.1)
## svDialogs 1.1.0 2022-05-10 [2] CRAN (R 4.3.1)
## svglite 2.1.2 2023-10-11 [2] CRAN (R 4.3.1)
## svgPanZoom 0.3.4 2020-02-15 [2] CRAN (R 4.3.1)
## svGUI 1.0.1 2021-04-16 [2] CRAN (R 4.3.1)
## SVM2CRMdata 1.33.0 2023-10-24 [2] Bioconductor
## SVMDO 1.2.0 2023-10-24 [2] Bioconductor
## svMisc 1.2.3 2021-10-11 [2] CRAN (R 4.3.1)
## svUnit 1.0.6 2021-04-19 [2] CRAN (R 4.3.1)
## swamp 1.5.1 2019-12-06 [2] CRAN (R 4.3.1)
## SWATH2stats 1.32.0 2023-10-24 [2] Bioconductor
## SwathXtend 2.24.0 2023-10-24 [2] Bioconductor
## swfdr 1.28.0 2023-10-24 [2] Bioconductor
## switchBox 1.38.0 2023-10-24 [2] Bioconductor
## switchde 1.28.0 2023-10-24 [2] Bioconductor
## sylly 0.1-6 2020-09-20 [2] CRAN (R 4.3.1)
## sylly.en 0.1-3 2018-03-19 [2] CRAN (R 4.3.1)
## synapsis 1.8.0 2023-10-24 [2] Bioconductor
## synapter 2.26.0 2023-10-24 [2] Bioconductor
## synapterdata 1.39.1 2023-10-24 [2] Bioconductor
## synaptome.data 0.99.6 2023-10-25 [2] Bioconductor
## synaptome.db 0.99.15 2023-10-25 [2] Bioconductor
## synergyfinder 3.10.0 2023-10-24 [2] Bioconductor
## SynExtend 1.14.0 2023-10-24 [2] Bioconductor
## synlet 2.2.0 2023-10-24 [2] Bioconductor
## SynMut 1.18.0 2023-10-24 [2] Bioconductor
## syntenet 1.4.0 2023-10-24 [2] Bioconductor
## sys 3.4.2 2023-05-23 [2] CRAN (R 4.3.1)
## sysfonts 0.8.8 2022-03-13 [2] CRAN (R 4.3.1)
## systemfonts 1.0.5 2023-10-09 [2] CRAN (R 4.3.1)
## systemPipeR 2.8.0 2023-10-24 [2] Bioconductor
## systemPipeRdata 2.5.1 2023-10-24 [2] Bioconductor
## systemPipeShiny 1.12.0 2023-10-24 [2] Bioconductor
## systemPipeTools 1.10.0 2023-10-24 [2] Bioconductor
## syuzhet 1.0.7 2023-08-11 [2] CRAN (R 4.3.1)
## TabulaMurisData 1.19.0 2023-10-24 [2] Bioconductor
## TabulaMurisSenisData 1.7.0 2023-10-24 [2] Bioconductor
## tadar 1.0.0 2023-10-24 [2] Bioconductor
## TADCompare 1.12.0 2023-10-24 [2] Bioconductor
## tagcloud 0.6 2015-07-03 [2] CRAN (R 4.3.1)
## tanggle 1.8.0 2023-10-24 [2] Bioconductor
## TAPseq 1.14.0 2023-10-24 [2] Bioconductor
## target 1.16.0 2023-10-24 [2] Bioconductor
## TargetDecoy 1.8.0 2023-10-24 [2] Bioconductor
## targetscan.Hs.eg.db 0.6.1 2023-06-20 [2] Bioconductor
## TargetScore 1.40.0 2023-10-24 [2] Bioconductor
## TargetScoreData 1.37.0 2023-10-24 [2] Bioconductor
## TargetSearch 2.4.0 2023-10-24 [2] Bioconductor
## TargetSearchData 1.39.0 2023-10-24 [2] Bioconductor
## tartare 1.15.0 2023-10-24 [2] Bioconductor
## taxize 0.9.100 2022-04-22 [2] CRAN (R 4.3.1)
## TBSignatureProfiler 1.14.0 2023-10-24 [2] Bioconductor
## TBX20BamSubset 1.37.0 2023-10-24 [2] Bioconductor
## TCA 1.2.1 2021-02-14 [2] CRAN (R 4.3.1)
## TCC 1.42.0 2023-10-24 [2] Bioconductor
## TCGAbiolinks 2.30.0 2023-10-24 [2] Bioconductor
## TCGAbiolinksGUI.data 1.21.0 2023-10-24 [2] Bioconductor
## TCGAcrcmiRNA 1.21.0 2023-10-24 [2] Bioconductor
## TCGAcrcmRNA 1.21.0 2023-10-24 [2] Bioconductor
## TCGAMethylation450k 1.37.0 2023-10-24 [2] Bioconductor
## TCGAutils 1.22.0 2023-10-24 [2] Bioconductor
## TCGAWorkflow 1.27.0 2023-10-24 [2] Bioconductor
## TCGAWorkflowData 1.25.3 2023-10-24 [2] Bioconductor
## tcltk 4.3.1 2023-06-20 [3] local
## tcltk2 1.2-11 2014-12-20 [2] CRAN (R 4.3.1)
## TCseq 1.26.0 2023-10-24 [2] Bioconductor
## TDbasedUFE 1.2.0 2023-10-24 [2] Bioconductor
## TDbasedUFEadv 1.2.0 2023-10-24 [2] Bioconductor
## TeachingDemos 2.12 2020-04-07 [2] CRAN (R 4.3.1)
## TEKRABber 1.6.0 2023-10-24 [2] Bioconductor
## tensor 1.5 2012-05-05 [2] CRAN (R 4.3.1)
## tensorA 0.36.2 2020-11-19 [2] CRAN (R 4.3.1)
## tensorflow 2.14.0 2023-09-28 [2] CRAN (R 4.3.1)
## TENxBrainData 1.21.0 2023-10-24 [2] Bioconductor
## TENxBUSData 1.15.0 2023-10-24 [2] Bioconductor
## TENxIO 1.4.0 2023-10-24 [2] Bioconductor
## TENxPBMCData 1.19.0 2023-10-24 [2] Bioconductor
## tenXplore 1.24.0 2023-10-24 [2] Bioconductor
## TENxVisiumData 1.9.0 2023-10-24 [2] Bioconductor
## TEQC 4.24.0 2023-10-24 [2] Bioconductor
## ternarynet 1.46.0 2023-10-24 [2] Bioconductor
## terra 1.7-55 2023-10-13 [2] CRAN (R 4.3.1)
## terraTCGAdata 1.6.0 2023-10-24 [2] Bioconductor
## tester 0.1.7 2013-11-14 [2] CRAN (R 4.3.1)
## testthat 3.2.0 2023-10-06 [2] CRAN (R 4.3.1)
## text2vec 0.6.3 2022-11-30 [2] CRAN (R 4.3.1)
## textclean 0.9.3 2018-07-23 [2] CRAN (R 4.3.1)
## textshape 1.7.3 2021-05-28 [2] CRAN (R 4.3.1)
## textshaping 0.3.7 2023-10-09 [2] CRAN (R 4.3.1)
## textstem 0.1.4 2018-04-09 [2] CRAN (R 4.3.1)
## TFARM 1.24.0 2023-10-24 [2] Bioconductor
## tfautograph 0.3.2 2021-09-17 [2] CRAN (R 4.3.1)
## TFBSTools 1.40.0 2023-10-24 [2] Bioconductor
## TFEA.ChIP 1.22.0 2023-10-24 [2] Bioconductor
## TFHAZ 1.24.0 2023-10-24 [2] Bioconductor
## TFisher 0.2.0 2018-03-21 [2] CRAN (R 4.3.1)
## TFMPvalue 0.0.9 2022-10-21 [2] CRAN (R 4.3.1)
## tfprobability 0.15.1 2022-09-01 [2] CRAN (R 4.3.1)
## tfruns 1.5.1 2022-09-05 [2] CRAN (R 4.3.1)
## TFutils 1.22.0 2023-10-24 [2] Bioconductor
## TH.data 1.1-2 2023-04-17 [2] CRAN (R 4.3.1)
## this.path 2.1.0 2023-09-13 [2] CRAN (R 4.3.1)
## threejs 0.3.3 2020-01-21 [2] CRAN (R 4.3.1)
## tibble 3.2.1 2023-03-20 [2] CRAN (R 4.3.1)
## tictoc 1.2 2023-04-23 [2] CRAN (R 4.3.1)
## tidybayes 3.0.6 2023-08-12 [2] CRAN (R 4.3.1)
## tidybulk 1.14.0 2023-10-24 [2] Bioconductor
## tidydr 0.0.5 2023-03-08 [2] CRAN (R 4.3.1)
## tidygraph 1.2.3 2023-02-01 [2] CRAN (R 4.3.1)
## tidyHeatmap 1.8.1 2022-05-20 [2] CRAN (R 4.3.1)
## tidyr 1.3.0 2023-01-24 [2] CRAN (R 4.3.1)
## tidyselect 1.2.0 2022-10-10 [2] CRAN (R 4.3.1)
## tidyseurat 0.7.4 2023-10-02 [2] CRAN (R 4.3.1)
## tidySingleCellExperiment 1.12.0 2023-10-24 [2] Bioconductor
## tidySummarizedExperiment 1.12.0 2023-10-24 [2] Bioconductor
## tidytext 0.4.1 2023-01-07 [2] CRAN (R 4.3.1)
## tidytidbits 0.3.2 2022-03-16 [2] CRAN (R 4.3.1)
## tidytree 0.4.5 2023-08-10 [2] CRAN (R 4.3.1)
## tidyverse 2.0.0 2023-02-22 [2] CRAN (R 4.3.1)
## tiff 0.1-11 2022-01-31 [2] CRAN (R 4.3.1)
## tightClust 1.1 2018-06-12 [2] CRAN (R 4.3.1)
## tigre 1.56.0 2023-10-24 [2] Bioconductor
## tiledb 0.21.1 2023-09-27 [2] CRAN (R 4.3.1)
## TileDBArray 1.12.0 2023-10-24 [2] Bioconductor
## tilingArray 1.80.0 2023-10-24 [2] Bioconductor
## timechange 0.2.0 2023-01-11 [2] CRAN (R 4.3.1)
## timecourse 1.74.0 2023-10-24 [2] Bioconductor
## timecoursedata 1.11.0 2023-10-24 [2] Bioconductor
## timeDate 4022.108 2023-01-07 [2] CRAN (R 4.3.1)
## timeOmics 1.14.0 2023-10-24 [2] Bioconductor
## TimerQuant 1.31.0 2023-10-24 [2] Bioconductor
## timescape 1.26.0 2023-10-24 [2] Bioconductor
## timeSeries 4031.107 2023-08-26 [2] CRAN (R 4.3.1)
## TimiRGeN 1.12.0 2023-10-24 [2] Bioconductor
## timsac 1.3.8-4 2023-09-30 [2] CRAN (R 4.3.1)
## TIN 1.34.0 2023-10-24 [2] Bioconductor
## tinesath1cdf 1.39.0 2023-10-24 [2] Bioconductor
## tinesath1probe 1.39.0 2023-10-24 [2] Bioconductor
## tinytest 1.4.1 2023-02-22 [2] CRAN (R 4.3.1)
## tinytex 0.48 2023-10-13 [2] CRAN (R 4.3.1)
## tippy 0.1.0 2021-01-11 [2] CRAN (R 4.3.1)
## TissueEnrich 1.22.0 2023-10-24 [2] Bioconductor
## tissueTreg 1.21.5 2023-10-24 [2] Bioconductor
## TitanCNA 1.40.0 2023-10-24 [2] Bioconductor
## tkrplot 0.0-27 2022-10-18 [2] CRAN (R 4.3.1)
## tkWidgets 1.80.0 2023-10-24 [2] Bioconductor
## tLOH 1.10.0 2023-10-24 [2] Bioconductor
## tm 0.7-11 2023-02-05 [2] CRAN (R 4.3.1)
## TMB 1.9.6 2023-08-11 [2] CRAN (R 4.3.1)
## TMExplorer 1.11.0 2023-10-24 [2] Bioconductor
## TMixClust 1.24.0 2023-10-24 [2] Bioconductor
## tmvtnorm 1.5 2022-03-22 [2] CRAN (R 4.3.1)
## TNBC.CMS 1.18.0 2023-10-24 [2] Bioconductor
## tnet 3.0.16 2020-02-24 [2] CRAN (R 4.3.1)
## TnT 1.24.0 2023-10-24 [2] Bioconductor
## TOAST 1.16.0 2023-10-24 [2] Bioconductor
## tofsimsData 1.29.0 2023-10-24 [2] Bioconductor
## tokenizers 0.3.0 2022-12-22 [2] CRAN (R 4.3.1)
## tomoda 1.12.0 2023-10-24 [2] Bioconductor
## tomoseqr 1.6.0 2023-10-24 [2] Bioconductor
## tools 4.3.1 2023-06-20 [3] local
## TOP 1.2.0 2023-10-24 [2] Bioconductor
## topconfects 1.18.0 2023-10-24 [2] Bioconductor
## topdownr 1.24.0 2023-10-24 [2] Bioconductor
## topdownrdata 1.23.0 2023-10-24 [2] Bioconductor
## topGO 2.54.0 2023-10-24 [2] Bioconductor
## topicmodels 0.2-14 2023-03-31 [2] CRAN (R 4.3.1)
## topologyGSA 1.5.0 2023-09-25 [2] CRAN (R 4.3.1)
## torch 0.11.0 2023-06-06 [2] CRAN (R 4.3.1)
## ToxicoGx 2.6.0 2023-10-24 [2] Bioconductor
## TPP 3.30.0 2023-10-24 [2] Bioconductor
## TPP2D 1.18.0 2023-10-24 [2] Bioconductor
## tracktables 1.36.0 2023-10-24 [2] Bioconductor
## trackViewer 1.38.0 2023-10-24 [2] Bioconductor
## tractor.base 3.3.5.1 2022-08-24 [2] CRAN (R 4.3.1)
## tradeSeq 1.16.0 2023-10-24 [2] Bioconductor
## TrajectoryGeometry 1.10.0 2023-10-24 [2] Bioconductor
## TrajectoryUtils 1.10.0 2023-10-24 [2] Bioconductor
## transcriptogramer 1.24.0 2023-10-24 [2] Bioconductor
## transcriptR 1.30.0 2023-10-24 [2] Bioconductor
## transformGamPoi 1.8.0 2023-10-24 [2] Bioconductor
## transite 1.20.0 2023-10-24 [2] Bioconductor
## tRanslatome 1.40.0 2023-10-24 [2] Bioconductor
## transomics2cytoscape 1.12.0 2023-10-24 [2] Bioconductor
## transport 0.14-6 2023-07-02 [2] CRAN (R 4.3.1)
## TransView 1.46.0 2023-10-24 [2] Bioconductor
## traseR 1.32.0 2023-10-24 [2] Bioconductor
## traviz 1.8.0 2023-10-24 [2] Bioconductor
## TreeAndLeaf 1.14.0 2023-10-24 [2] Bioconductor
## treeio 1.26.0 2023-10-24 [2] Bioconductor
## treekoR 1.10.0 2023-10-24 [2] Bioconductor
## treemap 2.4-4 2023-05-25 [2] CRAN (R 4.3.1)
## TreeSummarizedExperiment 2.10.0 2023-10-24 [2] Bioconductor
## TreeTools 1.10.0 2023-08-19 [2] CRAN (R 4.3.1)
## TREG 1.6.0 2023-10-24 [2] Bioconductor
## trena 1.24.0 2023-10-24 [2] Bioconductor
## Trendy 1.24.0 2023-10-24 [2] Bioconductor
## TRESS 1.8.0 2023-10-24 [2] Bioconductor
## tricycle 1.10.0 2023-10-24 [2] Bioconductor
## triebeard 0.4.1 2023-03-04 [2] CRAN (R 4.3.1)
## trigger 1.48.0 2023-10-24 [2] Bioconductor
## trio 3.40.0 2023-10-24 [2] Bioconductor
## triplex 1.42.0 2023-10-24 [2] Bioconductor
## tripr 1.8.0 2023-10-24 [2] Bioconductor
## tRNA 1.20.0 2023-10-24 [2] Bioconductor
## tRNAdbImport 1.20.0 2023-10-24 [2] Bioconductor
## tRNAscanImport 1.22.0 2023-10-24 [2] Bioconductor
## TRONCO 2.34.0 2023-10-24 [2] Bioconductor
## truncdist 1.0-2 2016-08-30 [2] CRAN (R 4.3.1)
## truncnorm 1.0-9 2023-03-20 [2] CRAN (R 4.3.1)
## trust 0.1-8 2020-01-10 [2] CRAN (R 4.3.1)
## TSAR 1.0.0 2023-10-24 [2] Bioconductor
## TSCAN 1.40.0 2023-10-24 [2] Bioconductor
## tseries 0.10-54 2023-05-02 [2] CRAN (R 4.3.1)
## tsne 0.1-3.1 2022-03-28 [2] CRAN (R 4.3.1)
## TSP 1.2-4 2023-04-04 [2] CRAN (R 4.3.1)
## ttgsea 1.10.0 2023-10-24 [2] Bioconductor
## TTMap 1.24.0 2023-10-24 [2] Bioconductor
## TTR 0.24.3 2021-12-12 [2] CRAN (R 4.3.1)
## ttservice 0.3.8 2023-08-24 [2] CRAN (R 4.3.1)
## tuberculosis 1.7.0 2023-10-24 [2] Bioconductor
## TumourMethData 0.99.4 2023-10-24 [2] Bioconductor
## tuneR 1.4.5 2023-08-14 [2] CRAN (R 4.3.1)
## TurboNorm 1.50.0 2023-10-24 [2] Bioconductor
## TVTB 1.28.0 2023-10-24 [2] Bioconductor
## tweeDEseq 1.48.0 2023-10-24 [2] Bioconductor
## tweeDEseqCountData 1.39.2 2023-10-24 [2] Bioconductor
## tweedie 2.3.5 2022-08-17 [2] CRAN (R 4.3.1)
## tweenr 2.0.2 2022-09-06 [2] CRAN (R 4.3.1)
## twilight 1.78.0 2023-10-24 [2] Bioconductor
## twoddpcr 1.26.0 2023-10-24 [2] Bioconductor
## txcutr 1.8.0 2023-10-24 [2] Bioconductor
## TxDb.Athaliana.BioMart.plantsmart22 3.0.1 2023-06-20 [2] Bioconductor
## TxDb.Athaliana.BioMart.plantsmart28 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Celegans.UCSC.ce11.ensGene 3.15.0 2023-06-20 [2] Bioconductor
## TxDb.Celegans.UCSC.ce11.refGene 3.4.6 2023-06-20 [2] Bioconductor
## TxDb.Celegans.UCSC.ce6.ensGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Dmelanogaster.UCSC.dm3.ensGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Dmelanogaster.UCSC.dm6.ensGene 3.12.0 2023-06-20 [2] Bioconductor
## TxDb.Drerio.UCSC.danRer10.refGene 3.4.6 2023-06-20 [2] Bioconductor
## TxDb.Ggallus.UCSC.galGal5.refGene 3.12.0 2023-06-20 [2] Bioconductor
## TxDb.Hsapiens.UCSC.hg18.knownGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Hsapiens.UCSC.hg38.knownGene 3.18.0 2023-09-21 [2] Bioconductor
## TxDb.Mmulatta.UCSC.rheMac10.refGene 3.14.0 2023-06-20 [2] Bioconductor
## TxDb.Mmusculus.UCSC.mm10.ensGene 3.4.0 2023-06-20 [2] Bioconductor
## TxDb.Mmusculus.UCSC.mm10.knownGene 3.10.0 2023-06-20 [2] Bioconductor
## TxDb.Mmusculus.UCSC.mm39.refGene 3.18.0 2023-10-09 [2] Bioconductor
## TxDb.Mmusculus.UCSC.mm9.knownGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Rnorvegicus.UCSC.rn4.ensGene 3.2.2 2023-06-20 [2] Bioconductor
## TxDb.Rnorvegicus.UCSC.rn5.refGene 3.12.0 2023-06-20 [2] Bioconductor
## TxDb.Rnorvegicus.UCSC.rn6.refGene 3.4.6 2023-06-20 [2] Bioconductor
## TxDb.Rnorvegicus.UCSC.rn7.refGene 3.15.0 2023-06-20 [2] Bioconductor
## TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 3.2.2 2023-06-20 [2] Bioconductor
## tximeta 1.20.0 2023-10-24 [2] Bioconductor
## tximport 1.30.0 2023-10-24 [2] Bioconductor
## tximportData 1.29.0 2023-10-24 [2] Bioconductor
## TypeInfo 1.68.0 2023-10-24 [2] Bioconductor
## tzdb 0.4.0 2023-05-12 [2] CRAN (R 4.3.1)
## UCell 2.6.0 2023-10-24 [2] Bioconductor
## uchardet 1.1.1 2022-11-07 [2] CRAN (R 4.3.1)
## ucminf 1.2.0 2023-05-29 [2] CRAN (R 4.3.1)
## UCSCRepeatMasker 3.17.3 2023-10-25 [2] Bioconductor
## Ularcirc 1.20.0 2023-10-24 [2] Bioconductor
## umap 0.2.10.0 2023-02-01 [2] CRAN (R 4.3.1)
## UMI4Cats 1.12.0 2023-10-24 [2] Bioconductor
## uncoverappLib 1.12.0 2023-10-24 [2] Bioconductor
## UNDO 1.44.0 2023-10-24 [2] Bioconductor
## unifiedWMWqPCR 1.38.0 2023-10-24 [2] Bioconductor
## UniProt.ws 2.42.0 2023-10-24 [2] Bioconductor
## UniProtKeywords 0.99.7 2023-10-25 [2] Bioconductor
## uniqtag 1.0.1 2022-06-10 [2] CRAN (R 4.3.1)
## Uniquorn 2.22.0 2023-10-24 [2] Bioconductor
## units 0.8-4 2023-09-13 [2] CRAN (R 4.3.1)
## unittest 1.6-0 2023-05-04 [2] CRAN (R 4.3.1)
## universalmotif 1.20.0 2023-10-24 [2] Bioconductor
## unmarked 1.3.2 2023-07-08 [2] CRAN (R 4.3.1)
## updateObject 1.6.0 2023-10-24 [2] Bioconductor
## UpSetR 1.4.0 2019-05-22 [2] CRAN (R 4.3.1)
## urca 1.3-3 2022-08-29 [2] CRAN (R 4.3.1)
## urlchecker 1.0.1 2021-11-30 [2] CRAN (R 4.3.1)
## urltools 1.7.3 2019-04-14 [2] CRAN (R 4.3.1)
## usethis 2.2.2 2023-07-06 [2] CRAN (R 4.3.1)
## uSORT 1.28.0 2023-10-24 [2] Bioconductor
## utf8 1.2.4 2023-10-22 [2] CRAN (R 4.3.1)
## utils * 4.3.1 2023-06-20 [3] local
## uuid 1.1-1 2023-08-17 [2] CRAN (R 4.3.1)
## uwot 0.1.16 2023-06-29 [2] CRAN (R 4.3.1)
## V8 4.4.0 2023-10-09 [2] CRAN (R 4.3.1)
## VAExprs 1.8.0 2023-10-24 [2] Bioconductor
## valr 0.7.0 2023-09-18 [2] CRAN (R 4.3.1)
## VAM 1.0.0 2021-09-07 [2] CRAN (R 4.3.1)
## VanillaICE 1.64.0 2023-10-24 [2] Bioconductor
## VarCon 1.10.0 2023-10-24 [2] Bioconductor
## VarfromPDB 2.2.10 2018-09-13 [2] CRAN (R 4.3.1)
## varhandle 2.0.6 2023-09-30 [2] CRAN (R 4.3.1)
## variancePartition 1.32.0 2023-10-24 [2] Bioconductor
## VariantAnnotation 1.48.0 2023-10-24 [2] Bioconductor
## VariantExperiment 1.16.0 2023-10-24 [2] Bioconductor
## VariantFiltering 1.38.0 2023-10-24 [2] Bioconductor
## variants 1.27.0 2023-10-24 [2] Bioconductor
## VariantTools 1.44.0 2023-10-24 [2] Bioconductor
## VariantToolsData 1.25.0 2023-10-24 [2] Bioconductor
## varSelRF 0.7-8 2017-07-10 [2] CRAN (R 4.3.1)
## VaSP 1.14.0 2023-10-24 [2] Bioconductor
## vbmp 1.70.0 2023-10-24 [2] Bioconductor
## vcd 1.4-11 2023-02-01 [2] CRAN (R 4.3.1)
## VCFArray 1.18.0 2023-10-24 [2] Bioconductor
## vcfR 1.14.0 2023-02-10 [2] CRAN (R 4.3.1)
## vctrs 0.6.4 2023-10-12 [2] CRAN (R 4.3.1)
## vdiffr 1.0.7 2023-09-22 [2] CRAN (R 4.3.1)
## VDJdive 1.4.0 2023-10-24 [2] Bioconductor
## VectraPolarisData 1.5.1 2023-10-24 [2] Bioconductor
## VegaMC 3.40.0 2023-10-24 [2] Bioconductor
## vegan 2.6-4 2022-10-11 [2] CRAN (R 4.3.1)
## velociraptor 1.12.0 2023-10-24 [2] Bioconductor
## veloviz 1.8.0 2023-10-24 [2] Bioconductor
## venn 1.11 2022-06-08 [2] CRAN (R 4.3.1)
## VennDetail 1.18.0 2023-10-24 [2] Bioconductor
## VennDiagram 1.7.3 2022-04-12 [2] CRAN (R 4.3.1)
## venneuler 1.1-3 2022-03-16 [2] CRAN (R 4.3.1)
## verification 1.42 2015-07-15 [2] CRAN (R 4.3.1)
## VERSO 1.12.0 2023-10-24 [2] Bioconductor
## VGAM 1.1-9 2023-09-19 [2] CRAN (R 4.3.1)
## vidger 1.22.0 2023-10-24 [2] Bioconductor
## VIM 6.2.2 2022-08-25 [2] CRAN (R 4.3.1)
## vioplot 0.4.0 2022-12-09 [2] CRAN (R 4.3.1)
## viper 1.36.0 2023-10-24 [2] Bioconductor
## vipor 0.4.5 2017-03-22 [2] CRAN (R 4.3.1)
## viridis 0.6.4 2023-07-22 [2] CRAN (R 4.3.1)
## viridisLite 0.4.2 2023-05-02 [2] CRAN (R 4.3.1)
## visdat 0.6.0 2023-02-02 [2] CRAN (R 4.3.1)
## ViSEAGO 1.16.0 2023-10-24 [2] forgemia.inra.fr,\nbioconductor.org (R 4.3.1)
## visNetwork 2.1.2 2022-09-29 [2] CRAN (R 4.3.1)
## vissE 1.10.0 2023-10-24 [2] Bioconductor
## Voyager 1.4.0 2023-10-24 [2] Bioconductor
## VplotR 1.12.0 2023-10-24 [2] Bioconductor
## vroom 1.6.4 2023-10-02 [2] CRAN (R 4.3.1)
## vsclust 1.4.0 2023-10-24 [2] Bioconductor
## vsn 3.70.0 2023-10-24 [2] Bioconductor
## vtpnet 0.42.0 2023-10-24 [2] Bioconductor
## vulcan 1.24.0 2023-10-24 [2] Bioconductor
## vulcandata 1.23.0 2023-10-24 [2] Bioconductor
## waddR 1.16.0 2023-10-24 [2] Bioconductor
## waffle 1.0.2 2023-09-30 [2] CRAN (R 4.3.1)
## waiter 0.2.5 2022-01-03 [2] CRAN (R 4.3.1)
## waldo 0.5.1 2023-05-08 [2] CRAN (R 4.3.1)
## warp 0.2.0 2020-10-21 [2] CRAN (R 4.3.1)
## wateRmelon 2.8.0 2023-10-24 [2] Bioconductor
## wavClusteR 2.36.0 2023-10-24 [2] Bioconductor
## waveslim 1.8.4 2022-08-14 [2] CRAN (R 4.3.1)
## wavethresh 4.7.2 2022-11-16 [2] CRAN (R 4.3.1)
## wdm 0.2.4 2023-08-10 [2] CRAN (R 4.3.1)
## weaver 1.68.0 2023-10-24 [2] Bioconductor
## webbioc 1.74.0 2023-10-24 [2] Bioconductor
## webchem 1.3.0 2023-06-09 [2] CRAN (R 4.3.1)
## webdriver 1.0.6 2021-01-12 [2] CRAN (R 4.3.1)
## WeberDivechaLCdata 1.3.0 2023-10-24 [2] Bioconductor
## webmockr 0.9.0 2023-02-28 [2] CRAN (R 4.3.1)
## webshot 0.5.5 2023-06-26 [2] CRAN (R 4.3.1)
## websocket 1.4.1 2021-08-18 [2] CRAN (R 4.3.1)
## webutils 1.1 2020-04-28 [2] CRAN (R 4.3.1)
## weitrix 1.14.0 2023-10-24 [2] Bioconductor
## WES.1KG.WUGSC 1.33.0 2023-10-24 [2] Bioconductor
## wesanderson 0.3.6 2018-04-20 [2] CRAN (R 4.3.1)
## WGCNA 1.72-1 2023-01-18 [2] CRAN (R 4.3.1)
## WGSmapp 1.13.0 2023-10-24 [2] Bioconductor
## wheatmap 0.2.0 2022-02-27 [2] CRAN (R 4.3.1)
## whisker 0.4.1 2022-12-05 [2] CRAN (R 4.3.1)
## widgetTools 1.80.0 2023-10-24 [2] Bioconductor
## widyr 0.1.5 2022-09-13 [2] CRAN (R 4.3.1)
## wiggleplotr 1.26.0 2023-10-24 [2] Bioconductor
## WikidataQueryServiceR 1.0.0 2020-06-16 [2] CRAN (R 4.3.1)
## WikidataR 2.3.3 2021-11-16 [2] CRAN (R 4.3.1)
## WikipediR 1.5.0 2017-02-05 [2] CRAN (R 4.3.1)
## wikitaxa 0.4.0 2020-06-29 [2] CRAN (R 4.3.1)
## withr 2.5.1 2023-09-26 [2] CRAN (R 4.3.1)
## wk 0.9.0 2023-10-22 [2] CRAN (R 4.3.1)
## word2vec 0.4.0 2023-10-07 [2] CRAN (R 4.3.1)
## wordcloud 2.6 2018-08-24 [2] CRAN (R 4.3.1)
## wordcloud2 0.2.1 2018-01-03 [2] CRAN (R 4.3.1)
## worrms 0.4.3 2023-06-20 [2] CRAN (R 4.3.1)
## wpm 1.12.0 2023-10-24 [2] Bioconductor
## wppi 1.10.0 2023-10-24 [2] Bioconductor
## Wrench 1.20.0 2023-10-24 [2] Bioconductor
## writexl 1.4.2 2023-01-06 [2] CRAN (R 4.3.1)
## WriteXLS 6.4.0 2022-02-24 [2] CRAN (R 4.3.1)
## wrswoR 1.1.1 2020-07-26 [2] CRAN (R 4.3.1)
## xcms 4.0.0 2023-10-24 [2] Bioconductor
## xcore 1.6.0 2023-10-24 [2] Bioconductor
## xcoredata 1.5.0 2023-10-24 [2] Bioconductor
## XDE 2.48.0 2023-10-24 [2] Bioconductor
## Xeva 1.18.0 2023-10-24 [2] Bioconductor
## xfun 0.40 2023-08-09 [2] CRAN (R 4.3.1)
## xgboost 1.7.5.1 2023-03-30 [2] CRAN (R 4.3.1)
## XhybCasneuf 1.39.0 2023-10-24 [2] Bioconductor
## XINA 1.20.0 2023-10-24 [2] Bioconductor
## XLConnect 1.0.7 2023-01-24 [2] CRAN (R 4.3.1)
## xlsx 0.6.5 2020-11-10 [2] CRAN (R 4.3.1)
## xlsxjars 0.6.1 2014-08-22 [2] CRAN (R 4.3.1)
## xmapbridge 1.60.0 2023-10-24 [2] Bioconductor
## XML 3.99-0.14 2023-03-19 [2] CRAN (R 4.3.1)
## xml2 1.3.5 2023-07-06 [2] CRAN (R 4.3.1)
## XML2R 0.0.6 2014-03-10 [2] CRAN (R 4.3.1)
## xmlparsedata 1.0.5 2021-03-06 [2] CRAN (R 4.3.1)
## XNAString 1.10.0 2023-10-24 [2] Bioconductor
## xopen 1.0.0 2018-09-17 [2] CRAN (R 4.3.1)
## xtable 1.8-4 2019-04-21 [2] CRAN (R 4.3.1)
## XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 0.99.12 2023-06-20 [2] Bioconductor
## XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 0.99.12 2023-06-20 [2] Bioconductor
## xts 0.13.1 2023-04-16 [2] CRAN (R 4.3.1)
## XVector 0.42.0 2023-10-24 [2] Bioconductor
## yaImpute 1.0-33 2022-11-03 [2] CRAN (R 4.3.1)
## yaml 2.3.7 2023-01-23 [2] CRAN (R 4.3.1)
## yamss 1.28.0 2023-10-24 [2] Bioconductor
## YAPSA 1.28.0 2023-10-24 [2] Bioconductor
## yardstick 1.2.0 2023-04-21 [2] CRAN (R 4.3.1)
## yarn 1.28.0 2023-10-24 [2] Bioconductor
## yeast2.db 3.13.0 2023-06-20 [2] Bioconductor
## yeastCC 1.41.0 2023-10-24 [2] Bioconductor
## yeastExpData 0.47.0 2023-10-24 [2] Bioconductor
## yeastGSData 0.39.0 2023-10-24 [2] Bioconductor
## yeastNagalakshmi 1.37.0 2023-10-24 [2] Bioconductor
## yeastRNASeq 0.39.0 2023-10-24 [2] Bioconductor
## yesno 0.1.2 2020-07-10 [2] CRAN (R 4.3.1)
## yulab.utils 0.1.0 2023-09-20 [2] CRAN (R 4.3.1)
## zCompositions 1.4.1 2023-08-23 [2] CRAN (R 4.3.1)
## zeallot 0.1.0 2018-01-28 [2] CRAN (R 4.3.1)
## zebrafishRNASeq 1.21.0 2023-10-24 [2] Bioconductor
## zellkonverter 1.12.0 2023-10-24 [2] Bioconductor
## zenith 1.4.0 2023-10-24 [2] Bioconductor
## zFPKM 1.24.0 2023-10-24 [2] Bioconductor
## zinbwave 1.24.0 2023-10-24 [2] Bioconductor
## zip 2.3.0 2023-04-17 [2] CRAN (R 4.3.1)
## zlibbioc 1.48.0 2023-10-24 [2] Bioconductor
## zoo 1.8-12 2023-04-13 [2] CRAN (R 4.3.1)
## ZygosityPredictor 1.2.0 2023-10-24 [2] Bioconductor
##
## [1] /tmp/Rtmpo9SNym/Rinst580a652abcb45
## [2] /home/biocbuild/bbs-3.18-bioc/R/site-library
## [3] /home/biocbuild/bbs-3.18-bioc/R/library
##
## β Python configuration ββββββββββββββββββββββββββββββββββββββββββββββββββββ
## Python is not available
##
## βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββReferences
Assigning cell types with SingleR. 2023. https://bioconductor.org/books/3.17/SingleRBook.
Orchestrating Single-Cell Analysis with Bioconductor. n.d. https://bioconductor.org/books/devel/OSCA.
The csaw Book. 2023. https://bioconductor.org/books/devel/csawBook.
Wickham, Hadley, Jay Hesselberth, and MaΓ«lle Salmon. 2022. Pkgdown: Make Static HTML Documentation for a Package. https://CRAN.R-project.org/package=pkgdown.
Xie, Yihui. 2014. βKnitr: A Comprehensive Tool for Reproducible Research in R.β In Implementing Reproducible Computational Research, edited by Victoria Stodden, Friedrich Leisch, and Roger D. Peng. Chapman; Hall/CRC.
βββ. 2016. Bookdown: Authoring Books and Technical Documents with R Markdown. Boca Raton, Florida: Chapman; Hall/CRC. https://bookdown.org/yihui/bookdown.