rols
An R interface to the Ontology Lookup Service
Bioconductor version: 3.23 · Package version: 3.8.2
The rols package is an interface to the Ontology Lookup Service (OLS) to access and query hundred of ontolgies directly from R.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rols")Details
| Maintainer | Laurent Gatto <laurent.gatto@uclouvain.be> |
| Author | Laurent Gatto [aut, cre] (ORCID: <https://orcid.org/0000-0002-1520-2268>), Tiage Chedraoui Silva [ctb], Andrew Clugston [ctb] |
| License | GPL-2 |
| URL | http://lgatto.github.io/rols/ |
| Bug Reports | https://github.com/lgatto/rols/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Annotation, GO, ImmunoOncology, MassSpectrometry, Software |
| Package Short Url | https://bioconductor.org/packages/rols/ |
Citation
From within R, enter citation("rols"):
Laurent Gatto. rols: An R interface to the Ontology Lookup Service. doi:10.18129/B9.bioc.rols, R package version 3.8.2, https://bioconductor.org/packages/rols.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | rols_3.8.2.tar.gz |
| Windows binary (x86_64) | rols_3.8.2.zip |
| macOS binary (arm64) | rols_3.8.2.tgz |
| macOS binary (x86_64) | rols_3.8.2.tgz |
Dependencies
Depends: methods, R (>= 4.1.0)
Imports: httr2, jsonlite, utils, Biobase
Suggests: GO.db, knitr (>= 1.1.0), BiocStyle (>= 2.5.19), testthat, lubridate, DT, rmarkdown