To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

In most cases, you don't need to download the package archive at all.

mosaicsExample

Example data for the mosaics package, which implements MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data

Bioconductor version: Release (3.0)

Data for the mosaics package, consisting of chromosome 21 ChIP and control sample data from a ChIP-seq experiment of STAT1 binding, with mappability, GC content, and sequence ambiguity scores of human genome HG18.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

Citation (from within R, enter citation("mosaicsExample")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

Documentation

PDF   Reference Manual

Details

biocViews ChIPseqData, ExperimentData, Homo_sapiens
Version 1.1.1
License GPL (>= 2)
Depends R (>= 2.11.1)
Imports
Suggests
System Requirements
URL http://groups.google.com/group/mosaics_user_group
Depends On Me
Imports Me
Suggests Me mosaics

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source mosaicsExample_1.1.1.tar.gz
Windows Binary mosaicsExample_1.1.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) mosaicsExample_1.1.1.tgz
Mac OS X 10.9 (Mavericks) mosaicsExample_1.1.1.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center