To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("runibic")

In most cases, you don't need to download the package archive at all.

runibic

DOI: 10.18129/B9.bioc.runibic    

runibic: row-based biclustering algorithm for analysis of gene expression data in R

Bioconductor version: Release (3.6)

This package implements UbiBic algorithm in R. This biclustering algorithm for analysis of gene expression data was introduced by Zhenjia Wang et al. in 2016. It is currently considered the most promising biclustering method for identification of meaningful structures in complex and noisy data.

Author: Patryk Orzechowski, Artur PaƄszczyk

Maintainer: Patryk Orzechowski <patryk.orzechowski at gmail.com>

Citation (from within R, enter citation("runibic")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("runibic")

Documentation

HTML runibic: UniBic in R Tutorial
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews Clustering, Coverage, GeneExpression, Microarray, Sequencing, Software
Version 1.0.2
License MIT + file LICENSE
Depends R (>= 3.4.0), biclust, SummarizedExperiment
Imports Rcpp (>= 0.12.12), testthat, methods
LinkingTo Rcpp
Suggests knitr, rmarkdown, GEOquery, affy, airway, QUBIC
SystemRequirements C++11, GNU make
Enhances
URL http://github.com/athril/runibic
BugReports http://github.com/athril/runibic/issues
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package runibic_1.0.2.tar.gz
Windows Binary runibic_1.0.2.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) runibic_1.0.2.tgz
Source Repository git clone https://git.bioconductor.org/packages/runibic
Package Short Url http://bioconductor.org/packages/runibic/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.6 Source Archive

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