ribor

DOI: 10.18129/B9.bioc.ribor    

An R Interface for Ribo Files

Bioconductor version: Release (3.11)

The ribor package provides an R Interface for .ribo files. It provides functionality to read the .ribo file, which is of HDF5 format, and performs common analyses on its contents.

Author: Michael Geng [cre], Hakan Ozadam [aut], Can Cenik [aut]

Maintainer: Michael Geng <michaelgeng at utexas.edu>

Citation (from within R, enter citation("ribor")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ribor")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ribor")

 

HTML R Script A Walkthrough of RiboR
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 1.0.0
In Bioconductor since BioC 3.11 (R-4.0) (< 6 months)
License GPL-3
Depends R (>= 3.6.0)
Imports dplyr, ggplot2, hash, methods, rhdf5, rlang, stats, S4Vectors, tidyr, tools, yaml
LinkingTo
Suggests testthat, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ribor_1.0.0.tar.gz
Windows Binary ribor_1.0.0.zip
macOS 10.13 (High Sierra) ribor_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ribor
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ribor
Package Short Url https://bioconductor.org/packages/ribor/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.11 Source Archive

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