To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("logitT")

In most cases, you don't need to download the package archive at all.

logitT

logit-t Package

Bioconductor version: Release (2.14)

The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.

Author: Tobias Guennel <tguennel at vcu.edu>

Maintainer: Tobias Guennel <tguennel at vcu.edu>

Citation (from within R, enter citation("logitT")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("logitT")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("logitT")

 

PDF R Script logitT primer
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.22.0
In Bioconductor since BioC 2.3 (R-2.8)
License GPL (>= 2)
Depends affy
Imports
Suggests SpikeInSubset
System Requirements
URL http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source logitT_1.22.0.tar.gz
Windows Binary logitT_1.22.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) logitT_1.22.0.tgz
Mac OS X 10.9 (Mavericks) logitT_1.22.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center