dupRadar
Assessment of duplication rates in RNA-Seq datasets
Bioconductor version: 3.23 · Package version: 1.42.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Duplication rate quality control for RNA-Seq datasets.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("dupRadar")Details
| Maintainer | Sergi Sayols <sergisayolspuig@gmail.com>, Holger Klein <holger.klein@gmail.com> |
| Author | Sergi Sayols <sergisayolspuig@gmail.com>, Holger Klein <holger.klein@gmail.com> |
| License | GPL-3 |
| URL | https://www.bioconductor.org/packages/dupRadar, https://ssayols.github.io/dupRadar/index.html |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ImmunoOncology, QualityControl, RNASeq, Sequencing, Software, Technology |
| Package Short Url | https://bioconductor.org/packages/dupRadar/ |
Citation
From within R, enter citation("dupRadar"):
Sergi Sayols, Holger Klein. dupRadar: Assessment of duplication rates in RNA-Seq datasets. doi:10.18129/B9.bioc.dupRadar, R package version 1.42.0, https://bioconductor.org/packages/dupRadar.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | dupRadar_1.42.0.tar.gz |
| macOS binary (arm64) | dupRadar_1.42.0.tgz |
| macOS binary (x86_64) | dupRadar_1.42.0.tgz |
Dependencies
Depends: R (>= 3.2.0)
Imports: Rsubread (>= 1.14.1), KernSmooth
Suggests: BiocStyle, knitr, rmarkdown, AnnotationHub