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Bump Hunter

Bioconductor version: Release (3.0)

Tools for finding bumps in genomic data

Author: Rafael A. Irizarry [cre, aut], Martin Ayree [aut], Kasper Daniel Hansen [aut], Hector Corrada Hansen [aut], Shan Andrews [ctb], Andrew E. Jaffe [ctb], Harris Jaffee [ctb]

Maintainer: Rafael A. Irizarry <rafa at>

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PDF R Script The bumphunter user's guide
PDF   Reference Manual
Text   NEWS


biocViews DNAMethylation, Epigenetics, Infrastructure, MultipleComparison, Software
Version 1.6.0
In Bioconductor since BioC 2.12 (R-3.0)
License Artistic-2.0
Depends R (>= 2.10), S4Vectors, IRanges, GenomeInfoDb, GenomicRanges, foreach, iterators, methods, parallel, locfit
Imports matrixStats, limma, doRNG, BiocGenerics, utils
Suggests RUnit, doParallel,, TxDb.Hsapiens.UCSC.hg19.knownGene
System Requirements
Depends On Me minfi
Imports Me derfinder
Suggests Me derfinderPlot

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Package Source bumphunter_1.6.0.tar.gz
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Mac OS X 10.6 (Snow Leopard) bumphunter_1.6.0.tgz
Mac OS X 10.9 (Mavericks) bumphunter_1.6.0.tgz
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