To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGREST")

In most cases, you don't need to download the package archive at all.

KEGGREST

 

Client-side REST access to KEGG

Bioconductor version: Release (3.1)

A package that provides a client interface to the KEGG REST server. Based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie.

Author: Dan Tenenbaum

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("KEGGREST")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGREST")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KEGGREST")

 

HTML R Script Accessing the KEGG REST API
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, KEGG, Pathways, Software, ThirdPartyClient
Version 1.8.0
In Bioconductor since BioC 2.12 (R-3.0) (2 years)
License Artistic-2.0
Depends
Imports methods, httr, png, Biostrings
LinkingTo
Suggests RUnit, BiocGenerics, knitr
SystemRequirements
Enhances
URL
Depends On Me Hiiragi2013, PAPi, ROntoTools
Imports Me clusterProfiler, EnrichmentBrowser, gage, KEGGprofile, mmnet, pathview, RnaSeqSampleSize
Suggests Me limma
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source KEGGREST_1.8.0.tar.gz
Windows Binary KEGGREST_1.8.0.zip
Mac OS X 10.6 (Snow Leopard) KEGGREST_1.8.0.tgz
Mac OS X 10.9 (Mavericks) KEGGREST_1.8.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

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