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qsmooth

This is the released version of qsmooth; for the devel version, see qsmooth.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9

Smooth quantile normalization

DOI: 10.18129/B9.bioc.qsmooth

Bioconductor version: Release (3.23)

Smooth quantile normalization is a generalization of quantile normalization, which is average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.

Author: Stephanie C. Hicks [aut, cre] ORCID: 0000-0002-7858-0231 , Kwame Okrah [aut], Koen Van den Berge [ctb], Hector Corrada Bravo [aut] ORCID: 0000-0002-1255-4444 , Rafael Irizarry [aut] ORCID: 0000-0002-3944-4309

Maintainer: Stephanie C. Hicks <shicks19 at jhu.edu>

Citation (from within R, enter citation("qsmooth")):

Stephanie C. Hicks, Kwame Okrah, Hector Corrada Bravo, Rafael Irizarry. qsmooth: Smooth quantile normalization. doi:10.18129/B9.bioc.qsmooth, R package version 1.28.0, https://bioconductor.org/packages/qsmooth.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("qsmooth")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("qsmooth")

Details

Package Archives

Follow Installation instructions to use this package in your R session.