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macrophage

This is the released version of macrophage; for the devel version, see macrophage.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9

Human macrophage immune response

DOI: 10.18129/B9.bioc.macrophage

Bioconductor version: Release (3.23)

This package provides the output of running Salmon on a set of 24 RNA-seq samples from Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", published in Nature Genetics, January 2018. For details on version numbers and how the samples were processed see the package vignette.

Author: Michael Love

Maintainer: Michael Love <michaelisaiahlove at gmail.com>

Citation (from within R, enter citation("macrophage")):

Michael Love. macrophage: Human macrophage immune response. doi:10.18129/B9.bioc.macrophage, R package version 1.28.0, https://bioconductor.org/packages/macrophage.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("macrophage")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("macrophage")

Details

Package Archives

Follow Installation instructions to use this package in your R session.