STexampleData

DOI: 10.18129/B9.bioc.STexampleData    

This is the development version of STexampleData; for the stable release version, see STexampleData.

Collection of spatially resolved transcriptomics datasets in SpatialExperiment Bioconductor format

Bioconductor version: Development (3.14)

Collection of spatially resolved transcriptomics datasets in SpatialExperiment Bioconductor format, for use in examples, demonstrations, tutorials, and other purposes. The datasets have been sourced from various publicly available sources, and cover several technological platforms.

Author: Lukas M. Weber [aut, cre]

Maintainer: Lukas M. Weber <lukas.weber.edu at gmail.com>

Citation (from within R, enter citation("STexampleData")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("STexampleData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("STexampleData")

 

HTML R Script STexampleData package overview
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, Mus_musculus_Data, ReproducibleResearch, SingleCellData
Version 1.1.13
License MIT + file LICENSE
Depends ExperimentHub, SpatialExperiment
Imports utils
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL https://github.com/lmweber/STexampleData
BugReports https://github.com/lmweber/STexampleData/issues
Depends On Me
Imports Me
Suggests Me ggspavis
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package STexampleData_1.1.13.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/STexampleData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/STexampleData
Package Short Url https://bioconductor.org/packages/STexampleData/
Package Downloads Report Download Stats

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