DOI: 10.18129/B9.bioc.FlowSorted.CordBloodCombined.450k    

This is the development version of FlowSorted.CordBloodCombined.450k; for the stable release version, see FlowSorted.CordBloodCombined.450k.

Illumina 450k/EPIC data on FACS and MACS umbilical blood cells

Bioconductor version: Development (3.15)

Raw data objects to be used for umbilical cord blood cell proportion estimation in minfi and similar packages. The FlowSorted.CordBloodCombined.450k object is based in samples assayed by Bakulski et al, Gervin et al., de Goede et al., and Lin et al.

Author: Lucas A. Salas [cre, aut], Kristina Gervin [aut], Meaghan C. Jones [aut], Kelly M. Bakulski [ctb], Devin C. Koestler [ctb], John K. Wiencke [ctb], Karl T. Kelsey [ctb], Robert Lyle [ctb], Brock C. Christensen [ctb], Janine Felix [ctb]

Maintainer: Lucas A. Salas <lucas.a.salas.diaz at dartmouth.edu>

Citation (from within R, enter citation("FlowSorted.CordBloodCombined.450k")):


To install this package, start R (version "4.2") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews ExperimentData, ExperimentHub, Genome, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue, TissueMicroarrayData
Version 1.11.1
License GPL-3
Depends R (>= 3.6), minfi(>= 1.21.2), SummarizedExperiment, IlluminaHumanMethylation450kanno.ilmn12.hg19(>= 0.2.1), IlluminaHumanMethylationEPICanno.ilm10b4.hg19, ExperimentHub(>= 1.9.1), FlowSorted.Blood.EPIC, utils
Suggests knitr, rmarkdown, testthat, IlluminaHumanMethylation450kmanifest(>= 0.2.0), IlluminaHumanMethylationEPICanno.ilm10b2.hg19
URL https://github.com/immunomethylomics/FlowSorted.CordBloodCombined.450k
BugReports https://github.com/immunomethylomics/FlowSorted.CordBloodCombined.450k/issues.
Depends On Me
Imports Me
Suggests Me FlowSorted.Blood.EPIC
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/FlowSorted.CordBloodCombined.450k
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FlowSorted.CordBloodCombined.450k
Package Short Url https://bioconductor.org/packages/FlowSorted.CordBloodCombined.450k/
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: