To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")

In most cases, you don't need to download the package archive at all.

globalSeq

 

   

This is the development version of globalSeq; for the stable release version, see globalSeq.

Testing for association between RNA-Seq and high-dimensional data

Bioconductor version: Development (3.5)

The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size.

Author: Armin Rauschenberger

Maintainer: Armin Rauschenberger <a.rauschenberger at vumc.nl>

Citation (from within R, enter citation("globalSeq")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("globalSeq")

 

PDF R Script globalSeq
PDF   Reference Manual
Text   NEWS

Details

biocViews DifferentialExpression, DimensionReduction, ExomeSeq, ExonArray, GeneExpression, GenomeWideAssociation, MultipleComparison, RNASeq, Regression, Sequencing, Software, Transcriptomics, WholeGenome, miRNA
Version 1.3.0
In Bioconductor since BioC 3.3 (R-3.3) (0.5 years)
License GPL-3
Depends R (>= 3.3.0)
Imports
LinkingTo
Suggests knitr, testthat, SummarizedExperiment
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source globalSeq_1.3.0.tar.gz
Windows Binary globalSeq_1.3.0.zip
Mac OS X 10.9 (Mavericks) globalSeq_1.3.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/globalSeq
Package Short Url http://bioconductor.org/packages/globalSeq/
Package Downloads Report Download Stats

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