DOI: 10.18129/B9.bioc.IWTomics    

This is the development version of IWTomics; for the stable release version, see IWTomics.

Interval-Wise Testing for Omics Data

Bioconductor version: Development (3.8)

Implementation of the Interval-Wise Testing (IWT) for omics data. This inferential procedure tests for differences in "Omics" data between two groups of genomic regions (or between a group of genomic regions and a reference center of symmetry), and does not require fixing location and scale at the outset.

Author: Marzia A Cremona, Alessia Pini, Francesca Chiaromonte, Simone Vantini

Maintainer: Marzia A Cremona <mac78 at psu.edu>

Citation (from within R, enter citation("IWTomics")):


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if (!requireNamespace("BiocManager", quietly=TRUE))
BiocManager::install("IWTomics", version = "devel")


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PDF R Script Introduction to IWTomics
PDF   Reference Manual
Text   NEWS


biocViews DataImport, DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, GenomeAnnotation, MultipleComparison, Software, StatisticalMethod
Version 1.5.0
In Bioconductor since BioC 3.5 (R-3.4) (1.5 years)
License GPL (>=2)
Depends GenomicRanges
Imports parallel, gtable, grid, graphics, methods, IRanges, KernSmooth, fda, S4Vectors, grDevices, stats, utils, tools
Suggests knitr
Depends On Me
Imports Me
Suggests Me
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Source Package IWTomics_1.5.0.tar.gz
Windows Binary IWTomics_1.5.0.zip
Mac OS X 10.11 (El Capitan) IWTomics_1.5.0.tgz
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Package Short Url http://bioconductor.org/packages/IWTomics/
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