To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ISoLDE")

In most cases, you don't need to download the package archive at all.

ISoLDE

DOI: 10.18129/B9.bioc.ISoLDE    

This is the development version of ISoLDE; for the stable release version, see ISoLDE.

Integrative Statistics of alleLe Dependent Expression

Bioconductor version: Development (3.7)

This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.

Author: Christelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]

Maintainer: Christelle Reynès <christelle.reynes at igf.cnrs.fr>

Citation (from within R, enter citation("ISoLDE")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ISoLDE")

Documentation

PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews Epigenetics, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Genetics, MathematicalBiology, MultipleComparison, RNASeq, SNP, Sequencing, Software, Transcription
Version 1.7.0
In Bioconductor since BioC 3.3 (R-3.3) (1.5 years)
License GPL (>= 2.0)
Depends R (>= 3.3.0), graphics, grDevices, stats, utils
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL www.r-project.org
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ISoLDE_1.7.0.tar.gz
Windows Binary ISoLDE_1.7.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) ISoLDE_1.7.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ISoLDE
Package Short Url http://bioconductor.org/packages/ISoLDE/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: