TabulaMurisData

This is the released version of TabulaMurisData; for the devel version, see TabulaMurisData.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8

10x And SmartSeq2 Data From The Tabula Muris Consortium

Bioconductor version: Release (3.23)

Access to processed 10x (droplet) and SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data from the Tabula Muris consortium (http://tabula-muris.ds.czbiohub.org/).

Author: Charlotte Soneson [aut, cre] ORCID: 0000-0003-3833-2169

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("TabulaMurisData")):

Charlotte Soneson. TabulaMurisData: 10x And SmartSeq2 Data From The Tabula Muris Consortium. doi:10.18129/B9.bioc.TabulaMurisData, R package version 1.30.0, https://bioconductor.org/packages/TabulaMurisData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TabulaMurisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, RNASeqData, SingleCellData
Version	1.30.0
In Bioconductor since	BioC 3.8 (R-3.5) (8 years)
License	MIT + file LICENSE
Depends	R (>= 3.5)
Imports	ExperimentHub, utils
System Requirements
URL

Suggests	knitr, rmarkdown, BiocStyle, SingleCellExperiment, scran, scater, iSEE, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	TabulaMurisData_1.30.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/TabulaMurisData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/TabulaMurisData
Package Short Url	https://bioconductor.org/packages/TabulaMurisData/
Package Downloads Report	Download Stats