Next generation sequencing data analysis with R/Bioconductor

CSC IT Center For Science, Espoo, Finland

2012-06-27 ~ 2012-06-29

Instructors

• Martin Morgan

Description

This course by Dr Martin Morgan covers R/Bioconductor functionality for several aspects of next generation sequencing data analysis, ranging from RNA-seq and ChIP-seq data analysis to variant annotation. The course consists of lectures and hands-on exercises, and it is targeted for people who already have experience with the R statistical programming language.

Materials

Install course package as follows using R-2.15:

source("http://bioconductor.org/biocLite.R")
useDevel()
source("http://bioconductor.org/scratch-repos/pkgInstall.R")
pkgInstall("SequenceAnalysis")

High-throughput sequence analysis with R and Bioconductor