mitoODEdata

DOI: 10.18129/B9.bioc.mitoODEdata    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

Experimental data associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay"

Bioconductor version: Release (3.12)

This package contains the experimental data (assay annotation, siRNA annotation, time-lapse cell counts) associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay". The data ultimately come from the Mitocheck assay reported in "Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes" (Neumann, Walter et al, Nature 2010).

Author: Gregoire Pau

Maintainer: Gregoire Pau <pau.gregoire at gene.com>

Citation (from within R, enter citation("mitoODEdata")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mitoODEdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mitoODEdata")

 

PDF R Script Mitoode data
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, Genome
Version 1.25.2
License LGPL
Depends R (>= 2.14.0)
Imports methods, graphics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mitoODEdata_1.25.2.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/mitoODEdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mitoODEdata
Package Short Url https://bioconductor.org/packages/mitoODEdata/
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