dsQTL

DOI: 10.18129/B9.bioc.dsQTL    

dsQTL, data excerpt from Degner et al. 2012 Nature letter

Bioconductor version: Release (3.8)

dsQTL, excerpt from Degner et al. 2012 Nature letter on DNA variants associated with DnaseI hypersensitivity

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("dsQTL")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("dsQTL", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dsQTL")

 

PDF R Script dsQTL, data excerpt from Degner et al. 2012 Nature letter
PDF   Reference Manual
Text   NEWS

Details

biocViews BiocViews, DNASeqData, ExperimentData, Genome, NCI, Project1000genomes, SequencingData
Version 0.20.0
License Artistic-2.0
Depends R (>= 2.15.0), utils, Biobase, SummarizedExperiment, GGBase(>= 3.31.1)
Imports
LinkingTo
Suggests GGtools, rtracklayer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me yriMulti
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package dsQTL_0.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/dsQTL
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/dsQTL
Package Short Url http://bioconductor.org/packages/dsQTL/
Package Downloads Report Download Stats

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