1 Introduction

Here, we explain the way to interpret of HTML report generated by cellCellReport. If cellCellDecomp is properly finished, we can perform cellCellReport function to output the HTML report. The results can be confirmed by typing example(cellCellReport). The report will be generated in the temporary directory (it costs 5 to 10 minutes). The output directory contains some files and directories as follows.

Here, look at the index.html.

Figure1 : HTML report of cellCellReport

2 Interpretation of “1. About scTensor Algorithm”

In the HTML report, the 1st item describes the overview of scTensor and other CCI-related packages.