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logitT

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.18 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see logitT.

logit-t Package


Bioconductor version: Release (3.18)

The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.

Author: Tobias Guennel <tguennel at vcu.edu>

Maintainer: Tobias Guennel <tguennel at vcu.edu>

Citation (from within R, enter citation("logitT")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("logitT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.60.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL (>= 2)
Depends affy
Imports
System Requirements
URL http://www.bioconductor.org
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Suggests SpikeInSubset
Linking To
Enhances
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary logitT_1.60.0.zip
macOS Binary (x86_64) logitT_1.60.0.tgz
macOS Binary (arm64) logitT_1.60.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/logitT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/logitT
Package Short Url https://bioconductor.org/packages/logitT/
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