To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Logolas")

In most cases, you don't need to download the package archive at all.

Logolas

 

   

Flexible and Customized Logo Plots using symbols, alphabets, numbers and alphanumeric strings

Bioconductor version: Release (3.5)

Produces logo plots of a variety of symbols and names comprising English alphabets, numerics and punctuations. Can be used for sequence motif generation, mutation pattern generation, protein amino acid geenration and symbol strength representation in any generic context.

Author: Kushal Dey [aut, cre]

Maintainer: Kushal Dey <kkdey at uchicago.edu>

Citation (from within R, enter citation("Logolas")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Logolas")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Logolas")

 

PDF R Script Flexible Logo plots of symbols and alphanumeric strings using Logolas
PDF   Reference Manual
Text   NEWS

Details

biocViews Alignment, SequenceMatching, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.5 (R-3.4) (< 6 months)
License GPL (>= 2)
Depends R (>= 3.4)
Imports grid, graphics
LinkingTo
Suggests knitr, BiocStyle, Biobase, roxygen2, devtools, xtable, gridExtra, RColorBrewer, seqLogo, aRxiv
SystemRequirements
Enhances
URL https://github.com/kkdey/Logolas
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Logolas_1.0.0.tar.gz
Windows Binary Logolas_1.0.0.zip
Mac OS X 10.11 (El Capitan) Logolas_1.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Logolas/tree/release-3.5
Package Short Url http://bioconductor.org/packages/Logolas/
Package Downloads Report Download Stats

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