| bigFragPipetoMSstatsFormat | Convert out-of-memory FragPipe files to MSstats format. |
| bigSpectronauttoMSstatsFormat | Convert out-of-memory Spectronaut files to MSstats format. |
| MSstatsAddAnnotationBig | Merge annotation to output of MSstatsPreprocessBig |
| MSstatsPreprocessBig | General converter for larger-than-memory csv files in MSstats format 10-column format |