Gain and Loss Analysis of DNA
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Documentation for package ‘GLAD’ version 2.72.0
- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Code demos. Use demo() to run them.
Help Pages
| array1 | Bladder cancer CGH data |
| array2 | Bladder cancer CGH data |
| array3 | Bladder cancer CGH data |
| arrayCGH | Object of Class arrayCGH |
| arrayPersp | Perspective image of microarray spots statistic |
| arrayPersp.arrayCGH | Perspective image of microarray spots statistic |
| arrayPersp.default | Perspective image of microarray spots statistic |
| arrayPlot | Spatial image of microarray spots statistic |
| arrayPlot.arrayCGH | Spatial image of microarray spots statistic |
| arrayPlot.default | Spatial image of microarray spots statistic |
| as.data.frame.profileCGH | profileCGH consercion |
| as.profileCGH | Create an object of class profileCGH |
| as.profileCGH.data.frame | Create an object of class profileCGH |
| ChrNumeric | Convert chromosome into numeric values |
| ColorBar | Calibration bar for color images |
| cytoband | Cytogenetic banding |
| daglad | Analysis of array CGH data |
| daglad.profileCGH | Analysis of array CGH data |
| glad | Analysis of array CGH data |
| glad.profileCGH | Analysis of array CGH data |
| gm00143 | Public CGH data of Snijders |
| gm01524 | Public CGH data of Snijders |
| gm01535 | Public CGH data of Snijders |
| gm01750 | Public CGH data of Snijders |
| gm02948 | Public CGH data of Snijders |
| gm03134 | Public CGH data of Snijders |
| gm03563 | Public CGH data of Snijders |
| gm03576 | Public CGH data of Snijders |
| gm04435 | Public CGH data of Snijders |
| gm05296 | Public CGH data of Snijders |
| gm07081 | Public CGH data of Snijders |
| gm07408 | Public CGH data of Snijders |
| gm10315 | Public CGH data of Snijders |
| gm13031 | Public CGH data of Snijders |
| gm13330 | Public CGH data of Snijders |
| hclustglad | Hierarchical Clustering |
| kernelpen | Kernelpen function |
| myPalette | Microarray color palette |
| P20 | Public CGH data of Veltman |
| P9 | Public CGH data of Veltman |
| plotProfile | Plot genomic profile and cytogenetic banding |
| plotProfile.profileCGH | Plot genomic profile and cytogenetic banding |
| profileCGH | Objects of Class profileCGH and profileChr |
| profileChr | Objects of Class profileCGH and profileChr |